Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 NAP1L4P2-201ENST00000425958 899 ntBASIC5.98□□□□□ -1.45
CCDC88CQ9P219 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CCDC88CQ9P219 AC114728.1-201ENST00000488289 483 ntBASIC5.98□□□□□ -1.45
CCDC88CQ9P219 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC5.98□□□□□ -1.45
CCDC88CQ9P219 RNA5SP418-201ENST00000515951 117 ntBASIC5.98□□□□□ -1.45
CCDC88CQ9P219 AC008429.2-201ENST00000523057 864 ntBASIC5.98□□□□□ -1.45
CCDC88CQ9P219 OLR1-209ENST00000543993 822 ntTSL 2 BASIC5.98□□□□□ -1.45
CCDC88CQ9P219 AC005632.2-201ENST00000564271 828 ntBASIC5.98□□□□□ -1.45
CCDC88CQ9P219 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC5.98□□□□□ -1.45
CCDC88CQ9P219 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC5.98□□□□□ -1.45
CCDC88CQ9P219 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC5.98□□□□□ -1.45
CCDC88CQ9P219 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.98□□□□□ -1.45
CCDC88CQ9P219 AC062022.1-201ENST00000451026 1684 ntBASIC5.98□□□□□ -1.45
CCDC88CQ9P219 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CCDC88CQ9P219 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
CCDC88CQ9P219 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
CCDC88CQ9P219 VN2R1P-201ENST00000449668 1743 ntBASIC5.98□□□□□ -1.45
CCDC88CQ9P219 AC073365.1-203ENST00000641055 1992 ntBASIC5.98□□□□□ -1.45
CCDC88CQ9P219 AC105749.1-201ENST00000631338 2008 ntBASIC5.98□□□□□ -1.45
CCDC88CQ9P219 LINC02250-201ENST00000422117 2491 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CCDC88CQ9P219 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CCDC88CQ9P219 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC5.98□□□□□ -1.45
CCDC88CQ9P219 AC125238.2-201ENST00000430003 1440 ntBASIC5.98□□□□□ -1.45
CCDC88CQ9P219 LCOR-201ENST00000286067 4542 ntBASIC5.98□□□□□ -1.45
CCDC88CQ9P219 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC5.98□□□□□ -1.45
CCDC88CQ9P219 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
CCDC88CQ9P219 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CCDC88CQ9P219 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CCDC88CQ9P219 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
CCDC88CQ9P219 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC5.98□□□□□ -1.45
CCDC88CQ9P219 SNORA77.2-201ENST00000408571 112 ntBASIC5.98□□□□□ -1.45
CCDC88CQ9P219 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.98□□□□□ -1.45
CCDC88CQ9P219 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC5.98□□□□□ -1.45
CCDC88CQ9P219 AMYP1-201ENST00000440059 1023 ntBASIC5.98□□□□□ -1.45
CCDC88CQ9P219 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC5.98□□□□□ -1.45
CCDC88CQ9P219 RN7SL254P-201ENST00000460609 284 ntBASIC5.98□□□□□ -1.45
CCDC88CQ9P219 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC5.98□□□□□ -1.45
CCDC88CQ9P219 AC090568.1-201ENST00000509499 856 ntBASIC5.98□□□□□ -1.45
CCDC88CQ9P219 AP004609.2-201ENST00000532177 190 ntBASIC5.98□□□□□ -1.45
CCDC88CQ9P219 AL845552.1-201ENST00000556820 323 ntBASIC5.98□□□□□ -1.45
CCDC88CQ9P219 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC5.98□□□□□ -1.45
CCDC88CQ9P219 RFPL4AP6-201ENST00000616792 846 ntBASIC5.98□□□□□ -1.45
CCDC88CQ9P219 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
CCDC88CQ9P219 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC5.97□□□□□ -1.45
CCDC88CQ9P219 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CCDC88CQ9P219 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC5.97□□□□□ -1.45
CCDC88CQ9P219 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CCDC88CQ9P219 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
CCDC88CQ9P219 OR52B5P-204ENST00000641744 3467 ntBASIC5.97□□□□□ -1.45
CCDC88CQ9P219 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CCDC88CQ9P219 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
CCDC88CQ9P219 TEK-204ENST00000519097 3836 ntTSL 2 BASIC5.97□□□□□ -1.45
CCDC88CQ9P219 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CCDC88CQ9P219 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CCDC88CQ9P219 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
CCDC88CQ9P219 RNA5SP477-201ENST00000362639 119 ntBASIC5.97□□□□□ -1.45
CCDC88CQ9P219 AL023284.3-201ENST00000407767 334 ntBASIC5.97□□□□□ -1.45
CCDC88CQ9P219 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC5.97□□□□□ -1.45
CCDC88CQ9P219 RPS7P8-201ENST00000418311 581 ntBASIC5.97□□□□□ -1.45
CCDC88CQ9P219 AC079807.1-201ENST00000429993 481 ntBASIC5.97□□□□□ -1.45
CCDC88CQ9P219 BMP6P1-201ENST00000431230 679 ntBASIC5.97□□□□□ -1.45
CCDC88CQ9P219 AC069154.1-201ENST00000432914 542 ntBASIC5.97□□□□□ -1.45
CCDC88CQ9P219 HMGB1P7-201ENST00000450921 612 ntBASIC5.97□□□□□ -1.45
CCDC88CQ9P219 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC5.97□□□□□ -1.45
CCDC88CQ9P219 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.97□□□□□ -1.45
CCDC88CQ9P219 OR4D12P-201ENST00000509361 911 ntBASIC5.97□□□□□ -1.45
CCDC88CQ9P219 MAST4-IT1-201ENST00000514241 658 ntBASIC5.97□□□□□ -1.45
CCDC88CQ9P219 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC5.97□□□□□ -1.45
CCDC88CQ9P219 AC090115.2-201ENST00000548060 883 ntBASIC5.97□□□□□ -1.45
CCDC88CQ9P219 AC007494.1-201ENST00000562293 760 ntBASIC5.97□□□□□ -1.45
CCDC88CQ9P219 LINC00556-201ENST00000569603 412 ntBASIC5.97□□□□□ -1.45
CCDC88CQ9P219 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC5.97□□□□□ -1.45
CCDC88CQ9P219 AL021368.3-201ENST00000607119 578 ntBASIC5.97□□□□□ -1.45
CCDC88CQ9P219 MIR6778-201ENST00000617912 73 ntBASIC5.97□□□□□ -1.45
CCDC88CQ9P219 AL512652.1-201ENST00000619006 500 ntBASIC5.97□□□□□ -1.45
CCDC88CQ9P219 AL109924.4-201ENST00000623089 670 ntBASIC5.97□□□□□ -1.45
CCDC88CQ9P219 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC5.97□□□□□ -1.45
CCDC88CQ9P219 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
CCDC88CQ9P219 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CCDC88CQ9P219 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC5.97□□□□□ -1.45
CCDC88CQ9P219 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC5.97□□□□□ -1.45
CCDC88CQ9P219 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC5.97□□□□□ -1.45
CCDC88CQ9P219 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CCDC88CQ9P219 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.97□□□□□ -1.45
CCDC88CQ9P219 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CCDC88CQ9P219 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CCDC88CQ9P219 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
CCDC88CQ9P219 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.45
CCDC88CQ9P219 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
CCDC88CQ9P219 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
CCDC88CQ9P219 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.45
CCDC88CQ9P219 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC5.96□□□□□ -1.45
CCDC88CQ9P219 RN7SKP187-201ENST00000365536 330 ntBASIC5.96□□□□□ -1.45
CCDC88CQ9P219 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.45
CCDC88CQ9P219 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC5.96□□□□□ -1.45
CCDC88CQ9P219 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC5.96□□□□□ -1.45
CCDC88CQ9P219 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC5.96□□□□□ -1.45
CCDC88CQ9P219 AL355355.1-201ENST00000442900 793 ntBASIC5.96□□□□□ -1.45
CCDC88CQ9P219 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.45
CCDC88CQ9P219 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms