Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 AC007336.2-201ENST00000611626 557 ntBASIC7.91□□□□□ -1.14
USB1Q9BQ65 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC7.91□□□□□ -1.14
USB1Q9BQ65 CR381653.1-205ENST00000623409 580 ntTSL 5 BASIC7.91□□□□□ -1.14
USB1Q9BQ65 C22orf24-203ENST00000623735 1247 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
USB1Q9BQ65 AL049541.2-201ENST00000626377 555 ntBASIC7.91□□□□□ -1.14
USB1Q9BQ65 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC7.91□□□□□ -1.14
USB1Q9BQ65 CCDC15-203ENST00000529051 3924 ntAPPRIS ALT2 TSL 5 BASIC7.91□□□□□ -1.14
USB1Q9BQ65 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC7.91□□□□□ -1.14
USB1Q9BQ65 CEACAM1-204ENST00000358394 1484 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
USB1Q9BQ65 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
USB1Q9BQ65 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
USB1Q9BQ65 AC117945.2-201ENST00000642109 1521 ntBASIC7.91□□□□□ -1.14
USB1Q9BQ65 SH3YL1-205ENST00000403712 1695 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
USB1Q9BQ65 C8orf44-201ENST00000390159 1817 ntAPPRIS P2 TSL 2 BASIC7.91□□□□□ -1.14
USB1Q9BQ65 ZNF641-202ENST00000448928 1856 ntTSL 2 BASIC7.91□□□□□ -1.14
USB1Q9BQ65 FGB-201ENST00000302068 1975 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
USB1Q9BQ65 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC7.91□□□□□ -1.14
USB1Q9BQ65 GTF2H2B-204ENST00000513202 1954 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
USB1Q9BQ65 HHIP-201ENST00000296575 10072 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
USB1Q9BQ65 AC079174.2-201ENST00000611145 2028 ntBASIC7.91□□□□□ -1.14
USB1Q9BQ65 CDC25C-201ENST00000323760 2128 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
USB1Q9BQ65 CA5B-204ENST00000454127 2205 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
USB1Q9BQ65 MAVS-201ENST00000416600 11596 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
USB1Q9BQ65 SLC3A1-204ENST00000409380 2424 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
USB1Q9BQ65 AC037487.1-201ENST00000583416 2474 ntTSL 5 BASIC7.91□□□□□ -1.14
USB1Q9BQ65 SMAP2-206ENST00000614549 2570 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
USB1Q9BQ65 AC125603.4-201ENST00000621942 2699 ntBASIC7.91□□□□□ -1.14
USB1Q9BQ65 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC7.91□□□□□ -1.14
USB1Q9BQ65 FRY-207ENST00000542859 13200 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
USB1Q9BQ65 SNCAIP-201ENST00000261367 4986 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
USB1Q9BQ65 KIF6-202ENST00000287152 9082 ntAPPRIS P1 TSL 2 BASIC7.91□□□□□ -1.14
USB1Q9BQ65 ZBTB18-202ENST00000622512 3740 ntAPPRIS ALT1 TSL 3 BASIC7.9□□□□□ -1.14
USB1Q9BQ65 METAP2-202ENST00000323666 3601 ntAPPRIS P3 TSL 1 (best) BASIC7.9□□□□□ -1.14
USB1Q9BQ65 FAM13C-216ENST00000618427 3458 ntAPPRIS ALT2 TSL 2 BASIC7.9□□□□□ -1.14
USB1Q9BQ65 OPALIN-205ENST00000536387 3392 ntTSL 3 BASIC7.9□□□□□ -1.14
USB1Q9BQ65 AL031123.2-201ENST00000563225 3325 ntBASIC7.9□□□□□ -1.14
USB1Q9BQ65 NCOA4-201ENST00000578454 2307 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
USB1Q9BQ65 TRAM2-201ENST00000182527 6908 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
USB1Q9BQ65 AP004289.1-201ENST00000436307 2205 ntBASIC7.9□□□□□ -1.14
USB1Q9BQ65 ICK-201ENST00000350082 6116 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
USB1Q9BQ65 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
USB1Q9BQ65 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
USB1Q9BQ65 KAT6A-203ENST00000406337 9241 ntAPPRIS P3 TSL 5 BASIC7.9□□□□□ -1.14
USB1Q9BQ65 AL359091.1-201ENST00000449048 1734 ntBASIC7.9□□□□□ -1.14
USB1Q9BQ65 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
USB1Q9BQ65 LAMA3-207ENST00000587184 5007 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
USB1Q9BQ65 SLC5A1-204ENST00000543737 4752 ntTSL 2 BASIC7.9□□□□□ -1.14
USB1Q9BQ65 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC7.9□□□□□ -1.14
USB1Q9BQ65 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
USB1Q9BQ65 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
USB1Q9BQ65 CREB1-201ENST00000353267 7588 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
USB1Q9BQ65 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC7.9□□□□□ -1.14
USB1Q9BQ65 TYW5-201ENST00000354611 4306 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
USB1Q9BQ65 CTNNA2-209ENST00000466387 4349 ntAPPRIS P1 TSL 2 BASIC7.9□□□□□ -1.14
USB1Q9BQ65 PTPN3-201ENST00000262539 6832 ntTSL 5 BASIC7.9□□□□□ -1.14
USB1Q9BQ65 OR5M9-201ENST00000279791 933 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
USB1Q9BQ65 OR14I1-201ENST00000342623 936 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
USB1Q9BQ65 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC7.9□□□□□ -1.14
USB1Q9BQ65 TNNT3-202ENST00000344578 794 ntAPPRIS ALT2 TSL 5 BASIC7.9□□□□□ -1.14
USB1Q9BQ65 RAB19-201ENST00000356407 822 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
USB1Q9BQ65 RNU6-1066P-201ENST00000363573 105 ntBASIC7.9□□□□□ -1.14
USB1Q9BQ65 RNU6-1322P-201ENST00000364309 107 ntBASIC7.9□□□□□ -1.14
USB1Q9BQ65 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC7.9□□□□□ -1.14
USB1Q9BQ65 SVBP-201ENST00000372521 658 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
USB1Q9BQ65 AC009967.1-201ENST00000379462 793 ntBASIC7.9□□□□□ -1.14
USB1Q9BQ65 TNNT3-205ENST00000381563 844 ntAPPRIS ALT2 TSL 5 BASIC7.9□□□□□ -1.14
USB1Q9BQ65 FETUB-202ENST00000382134 1055 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
USB1Q9BQ65 RNU6-809P-201ENST00000384461 107 ntBASIC7.9□□□□□ -1.14
USB1Q9BQ65 TNNT3-209ENST00000397304 720 ntAPPRIS ALT2 TSL 5 BASIC7.9□□□□□ -1.14
USB1Q9BQ65 AL589647.1-201ENST00000402485 466 ntBASIC7.9□□□□□ -1.14
USB1Q9BQ65 FANCL-204ENST00000403676 849 ntTSL 3 BASIC7.9□□□□□ -1.14
USB1Q9BQ65 RIMKLBP1-201ENST00000408914 1164 ntBASIC7.9□□□□□ -1.14
USB1Q9BQ65 RN7SKP129-201ENST00000410288 299 ntBASIC7.9□□□□□ -1.14
USB1Q9BQ65 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC7.9□□□□□ -1.14
USB1Q9BQ65 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC7.9□□□□□ -1.14
USB1Q9BQ65 AC083875.1-201ENST00000419509 405 ntBASIC7.9□□□□□ -1.14
USB1Q9BQ65 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC7.9□□□□□ -1.14
USB1Q9BQ65 RPL35AP12-201ENST00000425362 338 ntBASIC7.9□□□□□ -1.14
USB1Q9BQ65 Z68871.1-201ENST00000426528 1133 ntTSL 5 BASIC7.9□□□□□ -1.14
USB1Q9BQ65 OR2B7P-201ENST00000429302 934 ntBASIC7.9□□□□□ -1.14
USB1Q9BQ65 PFN1P1-201ENST00000442087 423 ntBASIC7.9□□□□□ -1.14
USB1Q9BQ65 CBWD4P-201ENST00000445695 655 ntBASIC7.9□□□□□ -1.14
USB1Q9BQ65 Z69666.1-201ENST00000445733 801 ntTSL 3 BASIC7.9□□□□□ -1.14
USB1Q9BQ65 TNNT3-210ENST00000446240 720 ntAPPRIS ALT2 TSL 5 BASIC7.9□□□□□ -1.14
USB1Q9BQ65 AC016683.1-201ENST00000446590 559 ntTSL 4 BASIC7.9□□□□□ -1.14
USB1Q9BQ65 HNRNPCP7-201ENST00000456056 905 ntBASIC7.9□□□□□ -1.14
USB1Q9BQ65 Y_RNA.632-201ENST00000459189 102 ntBASIC7.9□□□□□ -1.14
USB1Q9BQ65 MNX1-204ENST00000469500 209 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
USB1Q9BQ65 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC7.9□□□□□ -1.14
USB1Q9BQ65 RPS4XP17-201ENST00000479057 754 ntBASIC7.9□□□□□ -1.14
USB1Q9BQ65 RPL36P16-201ENST00000496996 306 ntBASIC7.9□□□□□ -1.14
USB1Q9BQ65 AC103851.1-201ENST00000506833 274 ntBASIC7.9□□□□□ -1.14
USB1Q9BQ65 C4orf22-205ENST00000508675 753 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
USB1Q9BQ65 LINC02223-203ENST00000514771 781 ntTSL 5 BASIC7.9□□□□□ -1.14
USB1Q9BQ65 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC7.9□□□□□ -1.14
USB1Q9BQ65 AC008429.4-201ENST00000521201 182 ntBASIC7.9□□□□□ -1.14
USB1Q9BQ65 AC008429.2-201ENST00000523057 864 ntBASIC7.9□□□□□ -1.14
USB1Q9BQ65 RAB19-203ENST00000537763 952 ntAPPRIS P1 TSL 2 BASIC7.9□□□□□ -1.14
USB1Q9BQ65 ELOCP31-201ENST00000540463 467 ntBASIC7.9□□□□□ -1.14
USB1Q9BQ65 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 136.5 ms