Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 IYD-202ENST00000344419 8742 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
NPAS4Q8IUM7 DAZ1-203ENST00000426000 1846 ntTSL 5 BASIC7.82□□□□□ -1.16
NPAS4Q8IUM7 SUPT16H-201ENST00000216297 4684 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
NPAS4Q8IUM7 OCLN-205ENST00000538151 5391 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
NPAS4Q8IUM7 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC7.82□□□□□ -1.16
NPAS4Q8IUM7 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC7.82□□□□□ -1.16
NPAS4Q8IUM7 RXFP1-207ENST00000470033 2175 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
NPAS4Q8IUM7 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
NPAS4Q8IUM7 OR5AU1-202ENST00000641039 8232 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
NPAS4Q8IUM7 CNOT4-201ENST00000315544 3783 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
NPAS4Q8IUM7 GABRA6-201ENST00000274545 2128 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
NPAS4Q8IUM7 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
NPAS4Q8IUM7 VPS8-210ENST00000446204 4721 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
NPAS4Q8IUM7 ADAMTS6-203ENST00000381055 7311 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
NPAS4Q8IUM7 RBM23-203ENST00000359890 10040 ntAPPRIS P4 TSL 1 (best) BASIC7.81□□□□□ -1.16
NPAS4Q8IUM7 DNM1L-207ENST00000452533 4439 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
NPAS4Q8IUM7 FSTL5-203ENST00000427802 2920 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
NPAS4Q8IUM7 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC7.81□□□□□ -1.16
NPAS4Q8IUM7 SCGB1A1-201ENST00000278282 441 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
NPAS4Q8IUM7 METTL21EP-201ENST00000298105 713 ntBASIC7.81□□□□□ -1.16
NPAS4Q8IUM7 OR4A16-201ENST00000314721 1081 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
NPAS4Q8IUM7 OR51L1-201ENST00000321543 948 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
NPAS4Q8IUM7 MT-TP-201ENST00000387461 68 ntBASIC7.81□□□□□ -1.16
NPAS4Q8IUM7 AL035419.1-201ENST00000397037 564 ntBASIC7.81□□□□□ -1.16
NPAS4Q8IUM7 RN7SKP221-201ENST00000410420 301 ntBASIC7.81□□□□□ -1.16
NPAS4Q8IUM7 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC7.81□□□□□ -1.16
NPAS4Q8IUM7 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC7.81□□□□□ -1.16
NPAS4Q8IUM7 ZDHHC20P2-201ENST00000424108 429 ntBASIC7.81□□□□□ -1.16
NPAS4Q8IUM7 NANOGP2-201ENST00000435391 727 ntBASIC7.81□□□□□ -1.16
NPAS4Q8IUM7 UBE2D3P1-201ENST00000436669 444 ntBASIC7.81□□□□□ -1.16
NPAS4Q8IUM7 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC7.81□□□□□ -1.16
NPAS4Q8IUM7 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC7.81□□□□□ -1.16
NPAS4Q8IUM7 AL772337.3-201ENST00000447524 452 ntTSL 3 BASIC7.81□□□□□ -1.16
NPAS4Q8IUM7 MYO5BP2-201ENST00000449815 1277 ntBASIC7.81□□□□□ -1.16
NPAS4Q8IUM7 USP9YP10-201ENST00000454868 628 ntBASIC7.81□□□□□ -1.16
NPAS4Q8IUM7 PTMAP1-205ENST00000455552 325 ntBASIC7.81□□□□□ -1.16
NPAS4Q8IUM7 RPSAP7-201ENST00000456871 885 ntBASIC7.81□□□□□ -1.16
NPAS4Q8IUM7 RBMY2HP-201ENST00000457961 720 ntBASIC7.81□□□□□ -1.16
NPAS4Q8IUM7 RN7SL751P-201ENST00000473281 284 ntBASIC7.81□□□□□ -1.16
NPAS4Q8IUM7 AC098583.1-201ENST00000480875 255 ntBASIC7.81□□□□□ -1.16
NPAS4Q8IUM7 AC091951.3-201ENST00000504093 246 ntBASIC7.81□□□□□ -1.16
NPAS4Q8IUM7 USP9YP5-201ENST00000511770 630 ntBASIC7.81□□□□□ -1.16
NPAS4Q8IUM7 HIGD1AP18-201ENST00000520730 278 ntBASIC7.81□□□□□ -1.16
NPAS4Q8IUM7 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC7.81□□□□□ -1.16
NPAS4Q8IUM7 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC7.81□□□□□ -1.16
NPAS4Q8IUM7 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC7.81□□□□□ -1.16
NPAS4Q8IUM7 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC7.81□□□□□ -1.16
NPAS4Q8IUM7 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC7.81□□□□□ -1.16
NPAS4Q8IUM7 AC156455.1-201ENST00000538790 851 ntTSL 2 BASIC7.81□□□□□ -1.16
NPAS4Q8IUM7 CLEC4E-206ENST00000545274 730 ntTSL 3 BASIC7.81□□□□□ -1.16
NPAS4Q8IUM7 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC7.81□□□□□ -1.16
NPAS4Q8IUM7 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC7.81□□□□□ -1.16
NPAS4Q8IUM7 HNRNPA1P71-201ENST00000559135 950 ntBASIC7.81□□□□□ -1.16
NPAS4Q8IUM7 AC095057.3-201ENST00000567102 1157 ntBASIC7.81□□□□□ -1.16
NPAS4Q8IUM7 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC7.81□□□□□ -1.16
NPAS4Q8IUM7 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC7.81□□□□□ -1.16
NPAS4Q8IUM7 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC7.81□□□□□ -1.16
NPAS4Q8IUM7 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC7.81□□□□□ -1.16
NPAS4Q8IUM7 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC7.81□□□□□ -1.16
NPAS4Q8IUM7 RN7SL178P-201ENST00000582930 304 ntBASIC7.81□□□□□ -1.16
NPAS4Q8IUM7 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC7.81□□□□□ -1.16
NPAS4Q8IUM7 AL353778.1-201ENST00000603149 408 ntBASIC7.81□□□□□ -1.16
NPAS4Q8IUM7 U1.34-201ENST00000618578 162 ntBASIC7.81□□□□□ -1.16
NPAS4Q8IUM7 AC068792.1-201ENST00000621354 417 ntBASIC7.81□□□□□ -1.16
NPAS4Q8IUM7 AC011815.3-201ENST00000624194 473 ntBASIC7.81□□□□□ -1.16
NPAS4Q8IUM7 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
NPAS4Q8IUM7 SMARCA2-252ENST00000636559 6853 ntTSL 2 BASIC7.81□□□□□ -1.16
NPAS4Q8IUM7 RORA-202ENST00000309157 1908 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
NPAS4Q8IUM7 AC000099.1-202ENST00000413812 1912 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
NPAS4Q8IUM7 SEC63P2-201ENST00000503863 1939 ntBASIC7.81□□□□□ -1.16
NPAS4Q8IUM7 ABRAXAS2-201ENST00000298492 2992 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
NPAS4Q8IUM7 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
NPAS4Q8IUM7 GGCX-201ENST00000233838 7569 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
NPAS4Q8IUM7 GTF2H3-212ENST00000543341 3329 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
NPAS4Q8IUM7 ZC3H6-202ENST00000409871 11542 ntAPPRIS P1 TSL 2 BASIC7.81□□□□□ -1.16
NPAS4Q8IUM7 IL1RL1-203ENST00000404917 3571 ntTSL 2 BASIC7.81□□□□□ -1.16
NPAS4Q8IUM7 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
NPAS4Q8IUM7 CYFIP2-201ENST00000435847 3673 ntTSL 2 BASIC7.81□□□□□ -1.16
NPAS4Q8IUM7 OFD1P17-201ENST00000437639 3018 ntBASIC7.81□□□□□ -1.16
NPAS4Q8IUM7 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC7.8□□□□□ -1.16
NPAS4Q8IUM7 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC7.8□□□□□ -1.16
NPAS4Q8IUM7 PPFIA2-201ENST00000333447 5517 ntTSL 5 BASIC7.8□□□□□ -1.16
NPAS4Q8IUM7 OXCT1-205ENST00000510634 1441 ntTSL 2 BASIC7.8□□□□□ -1.16
NPAS4Q8IUM7 ZC3H11A-203ENST00000367212 3004 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
NPAS4Q8IUM7 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
NPAS4Q8IUM7 BX664727.3-202ENST00000421686 1761 ntTSL 5 BASIC7.8□□□□□ -1.16
NPAS4Q8IUM7 LINC02431-202ENST00000505329 1788 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
NPAS4Q8IUM7 MARCH6-204ENST00000503788 2874 ntTSL 2 BASIC7.8□□□□□ -1.16
NPAS4Q8IUM7 GFPT1-201ENST00000357308 8703 ntTSL 5 BASIC7.8□□□□□ -1.16
NPAS4Q8IUM7 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
NPAS4Q8IUM7 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
NPAS4Q8IUM7 OR8J1-201ENST00000303039 1074 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
NPAS4Q8IUM7 PPIAP22-201ENST00000358455 498 ntBASIC7.8□□□□□ -1.16
NPAS4Q8IUM7 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
NPAS4Q8IUM7 RNU4-7P-201ENST00000364758 141 ntBASIC7.8□□□□□ -1.16
NPAS4Q8IUM7 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
NPAS4Q8IUM7 BRD8-203ENST00000402931 2982 ntTSL 5 BASIC7.8□□□□□ -1.16
NPAS4Q8IUM7 SFR1P1-201ENST00000403720 688 ntBASIC7.8□□□□□ -1.16
NPAS4Q8IUM7 RN7SKP182-201ENST00000410772 298 ntBASIC7.8□□□□□ -1.16
NPAS4Q8IUM7 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC7.8□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms