Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC5.96□□□□□ -1.46
LTBQ06643 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC5.96□□□□□ -1.46
LTBQ06643 CCL2-202ENST00000580907 736 ntTSL 2 BASIC5.96□□□□□ -1.46
LTBQ06643 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC5.96□□□□□ -1.46
LTBQ06643 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC5.96□□□□□ -1.46
LTBQ06643 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC5.96□□□□□ -1.46
LTBQ06643 AC245052.7-201ENST00000601161 359 ntBASIC5.96□□□□□ -1.46
LTBQ06643 AC091133.5-201ENST00000603088 301 ntBASIC5.96□□□□□ -1.46
LTBQ06643 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC5.96□□□□□ -1.46
LTBQ06643 Z98949.1-213ENST00000608921 856 ntTSL 5 BASIC5.96□□□□□ -1.46
LTBQ06643 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC5.96□□□□□ -1.46
LTBQ06643 AC018692.2-201ENST00000624130 348 ntBASIC5.96□□□□□ -1.46
LTBQ06643 AC114546.4-201ENST00000624413 369 ntBASIC5.96□□□□□ -1.46
LTBQ06643 OR4X2-201ENST00000624868 1025 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
LTBQ06643 TEX41-255ENST00000626404 610 ntTSL 5 BASIC5.96□□□□□ -1.46
LTBQ06643 AC073488.9-201ENST00000631601 754 ntBASIC5.96□□□□□ -1.46
LTBQ06643 AC087269.2-201ENST00000641764 975 ntBASIC5.96□□□□□ -1.46
LTBQ06643 AL163152.1-201ENST00000642001 374 ntBASIC5.96□□□□□ -1.46
LTBQ06643 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
LTBQ06643 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
LTBQ06643 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
LTBQ06643 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
LTBQ06643 IFIT1P1-201ENST00000400497 1449 ntBASIC5.96□□□□□ -1.46
LTBQ06643 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
LTBQ06643 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
LTBQ06643 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
LTBQ06643 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
LTBQ06643 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC5.96□□□□□ -1.46
LTBQ06643 NEK2P2-201ENST00000438441 1338 ntBASIC5.96□□□□□ -1.46
LTBQ06643 EEF1A1P12-201ENST00000443590 1346 ntBASIC5.96□□□□□ -1.46
LTBQ06643 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC5.96□□□□□ -1.46
LTBQ06643 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
LTBQ06643 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC5.96□□□□□ -1.46
LTBQ06643 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
LTBQ06643 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
LTBQ06643 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
LTBQ06643 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC5.95□□□□□ -1.46
LTBQ06643 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC5.95□□□□□ -1.46
LTBQ06643 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
LTBQ06643 AC005332.9-201ENST00000620266 2921 ntBASIC5.95□□□□□ -1.46
LTBQ06643 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC5.95□□□□□ -1.46
LTBQ06643 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
LTBQ06643 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
LTBQ06643 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
LTBQ06643 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
LTBQ06643 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC5.95□□□□□ -1.46
LTBQ06643 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC5.95□□□□□ -1.46
LTBQ06643 RNA5SP382-201ENST00000363355 112 ntBASIC5.95□□□□□ -1.46
LTBQ06643 RNA5SP433-201ENST00000364491 114 ntBASIC5.95□□□□□ -1.46
LTBQ06643 RN7SKP237-201ENST00000364663 301 ntBASIC5.95□□□□□ -1.46
LTBQ06643 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
LTBQ06643 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC5.95□□□□□ -1.46
LTBQ06643 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC5.95□□□□□ -1.46
LTBQ06643 AHCYP8-201ENST00000425108 209 ntBASIC5.95□□□□□ -1.46
LTBQ06643 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC5.95□□□□□ -1.46
LTBQ06643 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC5.95□□□□□ -1.46
LTBQ06643 ATP6V1G1P4-201ENST00000438388 335 ntBASIC5.95□□□□□ -1.46
LTBQ06643 SNRPBP1-201ENST00000443634 282 ntBASIC5.95□□□□□ -1.46
LTBQ06643 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC5.95□□□□□ -1.46
LTBQ06643 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC5.95□□□□□ -1.46
LTBQ06643 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC5.95□□□□□ -1.46
LTBQ06643 AC022415.1-202ENST00000486612 523 ntBASIC5.95□□□□□ -1.46
LTBQ06643 RN7SL37P-201ENST00000490461 307 ntBASIC5.95□□□□□ -1.46
LTBQ06643 RPL37AP8-201ENST00000494116 276 ntBASIC5.95□□□□□ -1.46
LTBQ06643 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC5.95□□□□□ -1.46
LTBQ06643 AC106822.1-201ENST00000502647 526 ntBASIC5.95□□□□□ -1.46
LTBQ06643 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC5.95□□□□□ -1.46
LTBQ06643 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.95□□□□□ -1.46
LTBQ06643 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC5.95□□□□□ -1.46
LTBQ06643 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
LTBQ06643 GNG2-203ENST00000553432 577 ntTSL 4 BASIC5.95□□□□□ -1.46
LTBQ06643 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC5.95□□□□□ -1.46
LTBQ06643 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC5.95□□□□□ -1.46
LTBQ06643 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC5.95□□□□□ -1.46
LTBQ06643 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC5.95□□□□□ -1.46
LTBQ06643 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
LTBQ06643 AC011497.2-201ENST00000600255 639 ntBASIC5.95□□□□□ -1.46
LTBQ06643 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC5.95□□□□□ -1.46
LTBQ06643 BUB1P1-201ENST00000603541 607 ntBASIC5.95□□□□□ -1.46
LTBQ06643 RPAP2P1-201ENST00000603626 1168 ntBASIC5.95□□□□□ -1.46
LTBQ06643 AC012368.3-201ENST00000604190 219 ntBASIC5.95□□□□□ -1.46
LTBQ06643 AP005131.7-201ENST00000610087 611 ntBASIC5.95□□□□□ -1.46
LTBQ06643 MIR6798-201ENST00000612887 67 ntBASIC5.95□□□□□ -1.46
LTBQ06643 AP001264.1-201ENST00000620602 703 ntBASIC5.95□□□□□ -1.46
LTBQ06643 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC5.95□□□□□ -1.46
LTBQ06643 AP001885.1-201ENST00000621658 558 ntBASIC5.95□□□□□ -1.46
LTBQ06643 AC127071.2-201ENST00000623293 527 ntBASIC5.95□□□□□ -1.46
LTBQ06643 AC243960.7-201ENST00000623532 707 ntBASIC5.95□□□□□ -1.46
LTBQ06643 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
LTBQ06643 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC5.95□□□□□ -1.46
LTBQ06643 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC5.95□□□□□ -1.46
LTBQ06643 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
LTBQ06643 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
LTBQ06643 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
LTBQ06643 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
LTBQ06643 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC5.95□□□□□ -1.46
LTBQ06643 DMD-222ENST00000474231 5209 ntTSL 5 BASIC5.95□□□□□ -1.46
LTBQ06643 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
LTBQ06643 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
LTBQ06643 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms