Protein–RNA interactions for Protein: Q05682

CALD1, Caldesmon, humanhuman

Known RBP Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1Q05682 AL157702.1-201ENST00000398764 426 ntBASIC8.24□□□□□ -1.09
CALD1Q05682 RN7SKP86-201ENST00000410454 332 ntBASIC8.24□□□□□ -1.09
CALD1Q05682 NME1P1-201ENST00000420914 382 ntBASIC8.24□□□□□ -1.09
CALD1Q05682 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC8.24□□□□□ -1.09
CALD1Q05682 IGLV3-4-201ENST00000432300 244 ntBASIC8.24□□□□□ -1.09
CALD1Q05682 AL645936.1-201ENST00000441979 518 ntBASIC8.24□□□□□ -1.09
CALD1Q05682 SERPINA7P1-201ENST00000443077 631 ntBASIC8.24□□□□□ -1.09
CALD1Q05682 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
CALD1Q05682 TIMM8BP2-201ENST00000445940 251 ntBASIC8.24□□□□□ -1.09
CALD1Q05682 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC8.24□□□□□ -1.09
CALD1Q05682 CT45A11P-201ENST00000448043 1134 ntBASIC8.24□□□□□ -1.09
CALD1Q05682 VPS25P1-201ENST00000455691 508 ntBASIC8.24□□□□□ -1.09
CALD1Q05682 AC113367.2-201ENST00000505749 160 ntBASIC8.24□□□□□ -1.09
CALD1Q05682 AP005639.1-201ENST00000526939 192 ntBASIC8.24□□□□□ -1.09
CALD1Q05682 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC8.24□□□□□ -1.09
CALD1Q05682 MYL2-203ENST00000548438 664 ntTSL 3 BASIC8.24□□□□□ -1.09
CALD1Q05682 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC8.24□□□□□ -1.09
CALD1Q05682 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC8.24□□□□□ -1.09
CALD1Q05682 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
CALD1Q05682 AC005828.7-201ENST00000607331 556 ntBASIC8.24□□□□□ -1.09
CALD1Q05682 AC024255.1-201ENST00000614376 102 ntBASIC8.24□□□□□ -1.09
CALD1Q05682 Xist_exon4.1-201ENST00000615964 126 ntBASIC8.24□□□□□ -1.09
CALD1Q05682 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC8.24□□□□□ -1.09
CALD1Q05682 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC8.24□□□□□ -1.09
CALD1Q05682 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC8.24□□□□□ -1.09
CALD1Q05682 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
CALD1Q05682 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
CALD1Q05682 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
CALD1Q05682 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
CALD1Q05682 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
CALD1Q05682 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
CALD1Q05682 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
CALD1Q05682 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC8.24□□□□□ -1.09
CALD1Q05682 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
CALD1Q05682 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC8.24□□□□□ -1.09
CALD1Q05682 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC8.24□□□□□ -1.09
CALD1Q05682 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC8.24□□□□□ -1.09
CALD1Q05682 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CALD1Q05682 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
CALD1Q05682 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
CALD1Q05682 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC8.23□□□□□ -1.09
CALD1Q05682 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CALD1Q05682 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
CALD1Q05682 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
CALD1Q05682 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC8.23□□□□□ -1.09
CALD1Q05682 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC8.23□□□□□ -1.09
CALD1Q05682 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CALD1Q05682 AC022034.1-201ENST00000512867 2156 ntBASIC8.23□□□□□ -1.09
CALD1Q05682 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CALD1Q05682 TINAG-203ENST00000370869 782 ntTSL 3 BASIC8.23□□□□□ -1.09
CALD1Q05682 AL139158.1-201ENST00000424719 340 ntBASIC8.23□□□□□ -1.09
CALD1Q05682 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC8.23□□□□□ -1.09
CALD1Q05682 OR13K1P-201ENST00000444577 975 ntBASIC8.23□□□□□ -1.09
CALD1Q05682 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC8.23□□□□□ -1.09
CALD1Q05682 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC8.23□□□□□ -1.09
CALD1Q05682 AC106822.1-201ENST00000502647 526 ntBASIC8.23□□□□□ -1.09
CALD1Q05682 RNA5SP206-201ENST00000516703 121 ntBASIC8.23□□□□□ -1.09
CALD1Q05682 NATP-201ENST00000523491 878 ntBASIC8.23□□□□□ -1.09
CALD1Q05682 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC8.23□□□□□ -1.09
CALD1Q05682 AL078601.3-201ENST00000573303 535 ntBASIC8.23□□□□□ -1.09
CALD1Q05682 LAPTM4BP2-201ENST00000604542 446 ntBASIC8.23□□□□□ -1.09
CALD1Q05682 AL135999.3-201ENST00000610501 812 ntBASIC8.23□□□□□ -1.09
CALD1Q05682 AC010998.3-201ENST00000613871 631 ntBASIC8.23□□□□□ -1.09
CALD1Q05682 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
CALD1Q05682 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CALD1Q05682 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC8.23□□□□□ -1.09
CALD1Q05682 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC8.23□□□□□ -1.09
CALD1Q05682 AC090181.3-201ENST00000624777 1514 ntBASIC8.23□□□□□ -1.09
CALD1Q05682 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
CALD1Q05682 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
CALD1Q05682 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CALD1Q05682 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
CALD1Q05682 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
CALD1Q05682 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
CALD1Q05682 BX284613.1-201ENST00000452221 1641 ntBASIC8.22□□□□□ -1.09
CALD1Q05682 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CALD1Q05682 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC8.22□□□□□ -1.09
CALD1Q05682 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC8.22□□□□□ -1.09
CALD1Q05682 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CALD1Q05682 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
CALD1Q05682 RPL23AP18-201ENST00000416139 468 ntBASIC8.22□□□□□ -1.09
CALD1Q05682 RPL7AP14-201ENST00000424041 802 ntBASIC8.22□□□□□ -1.09
CALD1Q05682 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC8.22□□□□□ -1.09
CALD1Q05682 UCK2-205ENST00000469256 753 ntTSL 3 BASIC8.22□□□□□ -1.09
CALD1Q05682 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC8.22□□□□□ -1.09
CALD1Q05682 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC8.22□□□□□ -1.09
CALD1Q05682 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC8.22□□□□□ -1.09
CALD1Q05682 DYNLL1P1-201ENST00000595442 269 ntBASIC8.22□□□□□ -1.09
CALD1Q05682 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC8.22□□□□□ -1.09
CALD1Q05682 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC8.22□□□□□ -1.09
CALD1Q05682 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC8.22□□□□□ -1.09
CALD1Q05682 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC8.22□□□□□ -1.09
CALD1Q05682 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC8.22□□□□□ -1.09
CALD1Q05682 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC8.22□□□□□ -1.09
CALD1Q05682 AL157831.2-201ENST00000564681 3095 ntBASIC8.22□□□□□ -1.09
CALD1Q05682 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC8.22□□□□□ -1.09
CALD1Q05682 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
CALD1Q05682 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC8.22□□□□□ -1.09
CALD1Q05682 AC011369.2-201ENST00000624423 1567 ntBASIC8.22□□□□□ -1.09
CALD1Q05682 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 151.4 ms