Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC5.64□□□□□ -1.51
H3F3AP84243 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
H3F3AP84243 YWHAZP4-201ENST00000392459 708 ntBASIC5.64□□□□□ -1.51
H3F3AP84243 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
H3F3AP84243 AL139805.1-201ENST00000407837 289 ntBASIC5.64□□□□□ -1.51
H3F3AP84243 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC5.64□□□□□ -1.51
H3F3AP84243 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC5.64□□□□□ -1.51
H3F3AP84243 OSTCP4-201ENST00000424397 449 ntBASIC5.64□□□□□ -1.51
H3F3AP84243 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.64□□□□□ -1.51
H3F3AP84243 RPS7P14-201ENST00000426405 583 ntBASIC5.64□□□□□ -1.51
H3F3AP84243 AC112492.2-201ENST00000432774 1030 ntBASIC5.64□□□□□ -1.51
H3F3AP84243 OR13K1P-201ENST00000444577 975 ntBASIC5.64□□□□□ -1.51
H3F3AP84243 AC092967.1-201ENST00000449016 481 ntBASIC5.64□□□□□ -1.51
H3F3AP84243 UCK2-205ENST00000469256 753 ntTSL 3 BASIC5.64□□□□□ -1.51
H3F3AP84243 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC5.64□□□□□ -1.51
H3F3AP84243 H3F3AP5-201ENST00000475267 429 ntBASIC5.64□□□□□ -1.51
H3F3AP84243 RN7SL568P-201ENST00000493069 298 ntBASIC5.64□□□□□ -1.51
H3F3AP84243 RN7SL104P-201ENST00000498686 293 ntBASIC5.64□□□□□ -1.51
H3F3AP84243 LINC02218-201ENST00000503267 529 ntTSL 2 BASIC5.64□□□□□ -1.51
H3F3AP84243 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
H3F3AP84243 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC5.64□□□□□ -1.51
H3F3AP84243 OR4D12P-201ENST00000509361 911 ntBASIC5.64□□□□□ -1.51
H3F3AP84243 IGHV7-34-1-201ENST00000519200 350 ntBASIC5.64□□□□□ -1.51
H3F3AP84243 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC5.64□□□□□ -1.51
H3F3AP84243 AP005639.1-201ENST00000526939 192 ntBASIC5.64□□□□□ -1.51
H3F3AP84243 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC5.64□□□□□ -1.51
H3F3AP84243 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC5.64□□□□□ -1.51
H3F3AP84243 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC5.64□□□□□ -1.51
H3F3AP84243 MIR4420-201ENST00000583944 77 ntBASIC5.64□□□□□ -1.51
H3F3AP84243 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC5.64□□□□□ -1.51
H3F3AP84243 AC011500.1-201ENST00000601963 469 ntBASIC5.64□□□□□ -1.51
H3F3AP84243 AC024589.2-201ENST00000605642 1294 ntBASIC5.64□□□□□ -1.51
H3F3AP84243 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC5.64□□□□□ -1.51
H3F3AP84243 AL352984.2-202ENST00000613699 155 ntBASIC5.64□□□□□ -1.51
H3F3AP84243 AL138960.1-201ENST00000613838 513 ntBASIC5.64□□□□□ -1.51
H3F3AP84243 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC5.64□□□□□ -1.51
H3F3AP84243 AP001885.1-201ENST00000621658 558 ntBASIC5.64□□□□□ -1.51
H3F3AP84243 AC018659.2-201ENST00000624690 715 ntBASIC5.64□□□□□ -1.51
H3F3AP84243 5S_rRNA.29-201ENST00000641250 107 ntBASIC5.64□□□□□ -1.51
H3F3AP84243 AL161901.1-201ENST00000624954 3425 ntBASIC5.64□□□□□ -1.51
H3F3AP84243 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC5.64□□□□□ -1.51
H3F3AP84243 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
H3F3AP84243 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
H3F3AP84243 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
H3F3AP84243 LINC01616-201ENST00000561816 2280 ntBASIC5.64□□□□□ -1.51
H3F3AP84243 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
H3F3AP84243 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC5.64□□□□□ -1.51
H3F3AP84243 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
H3F3AP84243 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
H3F3AP84243 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC5.64□□□□□ -1.51
H3F3AP84243 AL139039.3-201ENST00000413129 1475 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
H3F3AP84243 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.64□□□□□ -1.51
H3F3AP84243 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC5.64□□□□□ -1.51
H3F3AP84243 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC5.63□□□□□ -1.51
H3F3AP84243 AC011369.2-201ENST00000624423 1567 ntBASIC5.63□□□□□ -1.51
H3F3AP84243 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
H3F3AP84243 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
H3F3AP84243 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
H3F3AP84243 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
H3F3AP84243 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
H3F3AP84243 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
H3F3AP84243 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC5.63□□□□□ -1.51
H3F3AP84243 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
H3F3AP84243 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
H3F3AP84243 METTL5-202ENST00000308099 629 ntTSL 3 BASIC5.63□□□□□ -1.51
H3F3AP84243 RN7SKP250-201ENST00000363924 321 ntBASIC5.63□□□□□ -1.51
H3F3AP84243 SNORA70H-201ENST00000383910 135 ntBASIC5.63□□□□□ -1.51
H3F3AP84243 SNORA70J-201ENST00000384182 135 ntBASIC5.63□□□□□ -1.51
H3F3AP84243 CAV1-204ENST00000393470 598 ntTSL 4 BASIC5.63□□□□□ -1.51
H3F3AP84243 AC121334.1-201ENST00000396414 802 ntBASIC5.63□□□□□ -1.51
H3F3AP84243 RN7SKP121-201ENST00000410842 305 ntBASIC5.63□□□□□ -1.51
H3F3AP84243 MTND2P12-201ENST00000417560 1252 ntBASIC5.63□□□□□ -1.51
H3F3AP84243 THEM7P-201ENST00000419556 672 ntBASIC5.63□□□□□ -1.51
H3F3AP84243 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC5.63□□□□□ -1.51
H3F3AP84243 AC099782.1-201ENST00000425889 474 ntBASIC5.63□□□□□ -1.51
H3F3AP84243 AC094019.1-201ENST00000434678 472 ntBASIC5.63□□□□□ -1.51
H3F3AP84243 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
H3F3AP84243 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
H3F3AP84243 AC097359.1-201ENST00000447946 463 ntBASIC5.63□□□□□ -1.51
H3F3AP84243 VPS25P1-201ENST00000455691 508 ntBASIC5.63□□□□□ -1.51
H3F3AP84243 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC5.63□□□□□ -1.51
H3F3AP84243 RARRES2P3-201ENST00000457739 473 ntBASIC5.63□□□□□ -1.51
H3F3AP84243 AC109454.2-201ENST00000503470 520 ntTSL 5 BASIC5.63□□□□□ -1.51
H3F3AP84243 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC5.63□□□□□ -1.51
H3F3AP84243 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC5.63□□□□□ -1.51
H3F3AP84243 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC5.63□□□□□ -1.51
H3F3AP84243 RNA5SP206-201ENST00000516703 121 ntBASIC5.63□□□□□ -1.51
H3F3AP84243 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
H3F3AP84243 AC036111.2-201ENST00000533247 901 ntBASIC5.63□□□□□ -1.51
H3F3AP84243 OR4A6P-201ENST00000534364 970 ntBASIC5.63□□□□□ -1.51
H3F3AP84243 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC5.63□□□□□ -1.51
H3F3AP84243 OLR1-209ENST00000543993 822 ntTSL 2 BASIC5.63□□□□□ -1.51
H3F3AP84243 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC5.63□□□□□ -1.51
H3F3AP84243 MYL2-203ENST00000548438 664 ntTSL 3 BASIC5.63□□□□□ -1.51
H3F3AP84243 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
H3F3AP84243 AC005632.2-201ENST00000564271 828 ntBASIC5.63□□□□□ -1.51
H3F3AP84243 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
H3F3AP84243 LAPTM4BP2-201ENST00000604542 446 ntBASIC5.63□□□□□ -1.51
H3F3AP84243 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC5.63□□□□□ -1.51
H3F3AP84243 AC010998.3-201ENST00000613871 631 ntBASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms