Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PRKDCP78527 NNT-AS1-204ENST00000513560 4769 ntTSL 2 BASIC4.21□□□□□ -1.74
PRKDCP78527 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PRKDCP78527 ZEB2-245ENST00000638087 9339 ntTSL 5 BASIC4.21□□□□□ -1.74
PRKDCP78527 SLC36A4-206ENST00000529184 1917 ntTSL 2 BASIC4.21□□□□□ -1.74
PRKDCP78527 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC4.2□□□□□ -1.74
PRKDCP78527 ANK3-205ENST00000373827 7202 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
PRKDCP78527 ZMYND8-204ENST00000355972 5542 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
PRKDCP78527 CACNA1S-201ENST00000362061 6166 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
PRKDCP78527 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
PRKDCP78527 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PRKDCP78527 SUPT7L-201ENST00000337768 4488 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
PRKDCP78527 COL11A1-201ENST00000353414 7173 ntAPPRIS ALT1 TSL 5 BASIC4.2□□□□□ -1.74
PRKDCP78527 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
PRKDCP78527 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
PRKDCP78527 SNORA11F-201ENST00000408237 128 ntBASIC4.2□□□□□ -1.74
PRKDCP78527 RSL24D1P6-201ENST00000426934 401 ntBASIC4.2□□□□□ -1.74
PRKDCP78527 MGAT2P2-201ENST00000427194 797 ntBASIC4.2□□□□□ -1.74
PRKDCP78527 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC4.2□□□□□ -1.74
PRKDCP78527 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.2□□□□□ -1.74
PRKDCP78527 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC4.2□□□□□ -1.74
PRKDCP78527 AC011447.4-201ENST00000587562 111 ntBASIC4.2□□□□□ -1.74
PRKDCP78527 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PRKDCP78527 AC007938.2-201ENST00000604666 2634 ntBASIC4.2□□□□□ -1.74
PRKDCP78527 DLEU1_1.1-201ENST00000618107 190 ntBASIC4.2□□□□□ -1.74
PRKDCP78527 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC4.2□□□□□ -1.74
PRKDCP78527 CDHR1-206ENST00000623527 6781 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PRKDCP78527 PDE4DIP-203ENST00000369349 4677 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
PRKDCP78527 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC4.2□□□□□ -1.74
PRKDCP78527 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC4.2□□□□□ -1.74
PRKDCP78527 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC4.2□□□□□ -1.74
PRKDCP78527 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
PRKDCP78527 GUCY1A3-202ENST00000393832 4286 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
PRKDCP78527 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC4.2□□□□□ -1.74
PRKDCP78527 BTBD10-210ENST00000530907 1871 ntAPPRIS ALT1 TSL 2 BASIC4.2□□□□□ -1.74
PRKDCP78527 AC092724.1-201ENST00000624623 3397 ntBASIC4.2□□□□□ -1.74
PRKDCP78527 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
PRKDCP78527 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PRKDCP78527 HLF-210ENST00000575345 3589 ntTSL 2 BASIC4.2□□□□□ -1.74
PRKDCP78527 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PRKDCP78527 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC4.2□□□□□ -1.74
PRKDCP78527 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
PRKDCP78527 AL136981.1-203ENST00000451452 3844 ntBASIC4.2□□□□□ -1.74
PRKDCP78527 NMD3P2-201ENST00000421815 761 ntBASIC4.2□□□□□ -1.74
PRKDCP78527 ABCC5-205ENST00000427120 4697 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
PRKDCP78527 AC126120.1-201ENST00000431082 470 ntBASIC4.2□□□□□ -1.74
PRKDCP78527 LINC01918-202ENST00000438148 415 ntTSL 3 BASIC4.2□□□□□ -1.74
PRKDCP78527 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC4.2□□□□□ -1.74
PRKDCP78527 RPL21P129-201ENST00000491732 478 ntBASIC4.2□□□□□ -1.74
PRKDCP78527 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC4.2□□□□□ -1.74
PRKDCP78527 AC183089.2-201ENST00000637931 916 ntBASIC4.2□□□□□ -1.74
PRKDCP78527 DZIP1-201ENST00000347108 7068 ntAPPRIS P4 TSL 5 BASIC4.2□□□□□ -1.74
PRKDCP78527 ARHGEF11-201ENST00000361409 5788 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
PRKDCP78527 ZNF623-202ENST00000501748 6759 ntAPPRIS P3 BASIC4.2□□□□□ -1.74
PRKDCP78527 BEND2-202ENST00000380033 4611 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PRKDCP78527 ZNF101P1-201ENST00000435701 1720 ntBASIC4.2□□□□□ -1.74
PRKDCP78527 XIST-206ENST00000434839 2865 ntTSL 5 BASIC4.2□□□□□ -1.74
PRKDCP78527 RNF130-207ENST00000522208 9945 ntTSL 5 BASIC4.2□□□□□ -1.74
PRKDCP78527 ZNF667-202ENST00000504904 4390 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
PRKDCP78527 ACTR3C-206ENST00000613959 5142 ntBASIC4.2□□□□□ -1.74
PRKDCP78527 SFMBT2-201ENST00000361972 7922 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PRKDCP78527 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
PRKDCP78527 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
PRKDCP78527 FBN1-201ENST00000316623 11756 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PRKDCP78527 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PRKDCP78527 SNORA11.2-201ENST00000408318 127 ntBASIC4.2□□□□□ -1.74
PRKDCP78527 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC4.2□□□□□ -1.74
PRKDCP78527 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC4.2□□□□□ -1.74
PRKDCP78527 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC4.2□□□□□ -1.74
PRKDCP78527 AL138878.2-201ENST00000440581 1241 ntBASIC4.2□□□□□ -1.74
PRKDCP78527 AC022034.3-201ENST00000471393 478 ntBASIC4.2□□□□□ -1.74
PRKDCP78527 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.2□□□□□ -1.74
PRKDCP78527 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC4.2□□□□□ -1.74
PRKDCP78527 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.2□□□□□ -1.74
PRKDCP78527 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
PRKDCP78527 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.2□□□□□ -1.74
PRKDCP78527 TVP23CP2-201ENST00000571473 623 ntBASIC4.2□□□□□ -1.74
PRKDCP78527 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC4.2□□□□□ -1.74
PRKDCP78527 AL353626.1-201ENST00000613429 507 ntTSL 5 BASIC4.2□□□□□ -1.74
PRKDCP78527 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC4.2□□□□□ -1.74
PRKDCP78527 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.2□□□□□ -1.74
PRKDCP78527 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC4.2□□□□□ -1.74
PRKDCP78527 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
PRKDCP78527 PAPPA2-201ENST00000367661 4369 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
PRKDCP78527 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC4.2□□□□□ -1.74
PRKDCP78527 AFF2-205ENST00000370460 13746 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
PRKDCP78527 CASC19-221ENST00000641309 1382 ntBASIC4.2□□□□□ -1.74
PRKDCP78527 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
PRKDCP78527 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
PRKDCP78527 ARHGEF7-208ENST00000426073 4921 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
PRKDCP78527 SPATA31A1-201ENST00000377647 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PRKDCP78527 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC4.2□□□□□ -1.74
PRKDCP78527 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC4.2□□□□□ -1.74
PRKDCP78527 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PRKDCP78527 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PRKDCP78527 NHSL2-207ENST00000633930 13660 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
PRKDCP78527 PSMC1P2-201ENST00000423961 1204 ntBASIC4.19□□□□□ -1.74
PRKDCP78527 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC4.19□□□□□ -1.74
PRKDCP78527 AC073594.1-201ENST00000462065 364 ntBASIC4.19□□□□□ -1.74
PRKDCP78527 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms