Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
TPM4P67936 AC130360.2-201ENST00000533477 1556 ntBASIC6.93□□□□□ -1.3
TPM4P67936 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC6.93□□□□□ -1.3
TPM4P67936 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
TPM4P67936 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC6.93□□□□□ -1.3
TPM4P67936 BCORP1-203ENST00000513194 5093 ntBASIC6.93□□□□□ -1.3
TPM4P67936 KYNUP3-201ENST00000574386 1341 ntBASIC6.93□□□□□ -1.3
TPM4P67936 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC6.93□□□□□ -1.3
TPM4P67936 AC093671.1-201ENST00000624981 2929 ntBASIC6.93□□□□□ -1.3
TPM4P67936 AL049869.1-201ENST00000556933 1402 ntBASIC6.93□□□□□ -1.3
TPM4P67936 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.93□□□□□ -1.3
TPM4P67936 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
TPM4P67936 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
TPM4P67936 SLC2A3P2-201ENST00000331747 1480 ntBASIC6.92□□□□□ -1.3
TPM4P67936 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC6.92□□□□□ -1.3
TPM4P67936 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.92□□□□□ -1.3
TPM4P67936 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
TPM4P67936 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
TPM4P67936 SNORD35A-201ENST00000363389 86 ntBASIC6.92□□□□□ -1.3
TPM4P67936 AC019178.1-201ENST00000392337 440 ntBASIC6.92□□□□□ -1.3
TPM4P67936 NPM1P37-201ENST00000403105 874 ntBASIC6.92□□□□□ -1.3
TPM4P67936 AL451061.1-201ENST00000407887 862 ntBASIC6.92□□□□□ -1.3
TPM4P67936 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC6.92□□□□□ -1.3
TPM4P67936 AL589794.1-201ENST00000424971 390 ntBASIC6.92□□□□□ -1.3
TPM4P67936 VN1R53P-201ENST00000429536 957 ntBASIC6.92□□□□□ -1.3
TPM4P67936 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC6.92□□□□□ -1.3
TPM4P67936 MORF4-201ENST00000447135 971 ntBASIC6.92□□□□□ -1.3
TPM4P67936 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC6.92□□□□□ -1.3
TPM4P67936 SETP4-201ENST00000455717 868 ntBASIC6.92□□□□□ -1.3
TPM4P67936 RN7SKP198-201ENST00000459286 306 ntBASIC6.92□□□□□ -1.3
TPM4P67936 AC073594.1-201ENST00000462065 364 ntBASIC6.92□□□□□ -1.3
TPM4P67936 AC093719.1-201ENST00000480427 441 ntBASIC6.92□□□□□ -1.3
TPM4P67936 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC6.92□□□□□ -1.3
TPM4P67936 SMR3B-202ENST00000504825 489 ntAPPRIS P1 TSL 3 BASIC6.92□□□□□ -1.3
TPM4P67936 AC137549.1-201ENST00000514243 533 ntBASIC6.92□□□□□ -1.3
TPM4P67936 AC097486.1-201ENST00000515331 210 ntBASIC6.92□□□□□ -1.3
TPM4P67936 AZIN1-AS1-211ENST00000520455 480 ntTSL 3 BASIC6.92□□□□□ -1.3
TPM4P67936 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC6.92□□□□□ -1.3
TPM4P67936 RPL3P13-201ENST00000550415 216 ntBASIC6.92□□□□□ -1.3
TPM4P67936 NPM1P42-201ENST00000560329 862 ntBASIC6.92□□□□□ -1.3
TPM4P67936 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC6.92□□□□□ -1.3
TPM4P67936 AC009283.1-201ENST00000615852 645 ntBASIC6.92□□□□□ -1.3
TPM4P67936 AC000095.2-202ENST00000637415 154 ntBASIC6.92□□□□□ -1.3
TPM4P67936 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
TPM4P67936 HSPD1P1-201ENST00000503199 1726 ntBASIC6.92□□□□□ -1.3
TPM4P67936 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC6.92□□□□□ -1.3
TPM4P67936 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC6.92□□□□□ -1.3
TPM4P67936 AC005702.3-201ENST00000585345 1447 ntBASIC6.92□□□□□ -1.3
TPM4P67936 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
TPM4P67936 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC6.92□□□□□ -1.3
TPM4P67936 MAP3K19-206ENST00000392918 1460 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
TPM4P67936 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC6.91□□□□□ -1.3
TPM4P67936 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
TPM4P67936 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.91□□□□□ -1.3
TPM4P67936 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC6.91□□□□□ -1.3
TPM4P67936 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC6.91□□□□□ -1.3
TPM4P67936 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
TPM4P67936 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
TPM4P67936 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.91□□□□□ -1.3
TPM4P67936 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.91□□□□□ -1.3
TPM4P67936 OR51M1-201ENST00000328611 1058 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
TPM4P67936 ENSA-207ENST00000362052 703 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
TPM4P67936 MICG-208ENST00000416822 132 ntBASIC6.91□□□□□ -1.3
TPM4P67936 AL354868.1-201ENST00000417077 482 ntBASIC6.91□□□□□ -1.3
TPM4P67936 YWHAZP5-201ENST00000419975 730 ntBASIC6.91□□□□□ -1.3
TPM4P67936 CENPN-204ENST00000428963 971 ntTSL 2 BASIC6.91□□□□□ -1.3
TPM4P67936 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
TPM4P67936 AC239800.1-201ENST00000442049 719 ntBASIC6.91□□□□□ -1.3
TPM4P67936 AL353803.3-201ENST00000444641 335 ntBASIC6.91□□□□□ -1.3
TPM4P67936 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC6.91□□□□□ -1.3
TPM4P67936 AC019186.1-201ENST00000447019 545 ntTSL 3 BASIC6.91□□□□□ -1.3
TPM4P67936 AL121578.2-201ENST00000448797 447 ntBASIC6.91□□□□□ -1.3
TPM4P67936 AC022080.2-201ENST00000452932 533 ntBASIC6.91□□□□□ -1.3
TPM4P67936 AC010409.2-201ENST00000505780 478 ntBASIC6.91□□□□□ -1.3
TPM4P67936 SCARNA11.1-201ENST00000516918 132 ntBASIC6.91□□□□□ -1.3
TPM4P67936 AC234917.1-201ENST00000534006 316 ntTSL 3 BASIC6.91□□□□□ -1.3
TPM4P67936 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC6.91□□□□□ -1.3
TPM4P67936 AC005519.1-201ENST00000554490 601 ntBASIC6.91□□□□□ -1.3
TPM4P67936 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC6.91□□□□□ -1.3
TPM4P67936 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC6.91□□□□□ -1.3
TPM4P67936 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC6.91□□□□□ -1.3
TPM4P67936 AC010287.1-201ENST00000566916 357 ntBASIC6.91□□□□□ -1.3
TPM4P67936 RN7SL426P-201ENST00000579106 295 ntBASIC6.91□□□□□ -1.3
TPM4P67936 DYNLL1P1-201ENST00000595442 269 ntBASIC6.91□□□□□ -1.3
TPM4P67936 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
TPM4P67936 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
TPM4P67936 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC6.91□□□□□ -1.3
TPM4P67936 SAMM50P1-201ENST00000455403 1399 ntBASIC6.91□□□□□ -1.3
TPM4P67936 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC6.91□□□□□ -1.3
TPM4P67936 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.91□□□□□ -1.3
TPM4P67936 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC6.91□□□□□ -1.3
TPM4P67936 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
TPM4P67936 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
TPM4P67936 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
TPM4P67936 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
TPM4P67936 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
TPM4P67936 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.9□□□□□ -1.3
TPM4P67936 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
TPM4P67936 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC6.9□□□□□ -1.3
TPM4P67936 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms