Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 AC027288.1-201ENST00000548359 816 ntTSL 3 BASIC5.52□□□□□ -1.53
UBA52P62987 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.52□□□□□ -1.53
UBA52P62987 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC5.52□□□□□ -1.53
UBA52P62987 C14orf119-202ENST00000554203 725 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
UBA52P62987 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
UBA52P62987 AC037479.1-201ENST00000558361 625 ntBASIC5.52□□□□□ -1.53
UBA52P62987 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC5.52□□□□□ -1.53
UBA52P62987 RN7SL230P-201ENST00000580835 303 ntBASIC5.52□□□□□ -1.53
UBA52P62987 AC012368.3-201ENST00000604190 219 ntBASIC5.52□□□□□ -1.53
UBA52P62987 AL499605.1-201ENST00000604628 403 ntBASIC5.52□□□□□ -1.53
UBA52P62987 AC012676.3-201ENST00000614983 479 ntBASIC5.52□□□□□ -1.53
UBA52P62987 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC5.52□□□□□ -1.53
UBA52P62987 AC009120.7-201ENST00000623452 780 ntBASIC5.52□□□□□ -1.53
UBA52P62987 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC5.52□□□□□ -1.53
UBA52P62987 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
UBA52P62987 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
UBA52P62987 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
UBA52P62987 DLEU2L-201ENST00000371086 3555 ntBASIC5.52□□□□□ -1.53
UBA52P62987 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
UBA52P62987 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
UBA52P62987 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC5.52□□□□□ -1.53
UBA52P62987 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
UBA52P62987 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.52□□□□□ -1.53
UBA52P62987 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC5.51□□□□□ -1.53
UBA52P62987 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
UBA52P62987 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC5.51□□□□□ -1.53
UBA52P62987 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
UBA52P62987 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
UBA52P62987 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
UBA52P62987 DTNA-201ENST00000269192 1964 ntTSL 2 BASIC5.51□□□□□ -1.53
UBA52P62987 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.51□□□□□ -1.53
UBA52P62987 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
UBA52P62987 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
UBA52P62987 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
UBA52P62987 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
UBA52P62987 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC5.51□□□□□ -1.53
UBA52P62987 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.51□□□□□ -1.53
UBA52P62987 OXCT1-204ENST00000509987 1441 ntTSL 2 BASIC5.51□□□□□ -1.53
UBA52P62987 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.51□□□□□ -1.53
UBA52P62987 AC079753.1-201ENST00000623243 3868 ntBASIC5.51□□□□□ -1.53
UBA52P62987 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
UBA52P62987 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
UBA52P62987 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
UBA52P62987 AC087516.1-201ENST00000561236 2428 ntBASIC5.51□□□□□ -1.53
UBA52P62987 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
UBA52P62987 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
UBA52P62987 AL050335.1-201ENST00000396909 869 ntBASIC5.51□□□□□ -1.53
UBA52P62987 RN7SKP17-201ENST00000411242 351 ntBASIC5.51□□□□□ -1.53
UBA52P62987 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC5.51□□□□□ -1.53
UBA52P62987 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC5.51□□□□□ -1.53
UBA52P62987 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC5.51□□□□□ -1.53
UBA52P62987 RPL5P2-201ENST00000429598 854 ntBASIC5.51□□□□□ -1.53
UBA52P62987 OR6R1P-201ENST00000431838 940 ntBASIC5.51□□□□□ -1.53
UBA52P62987 AL354893.1-201ENST00000433735 348 ntBASIC5.51□□□□□ -1.53
UBA52P62987 ATP6V1G1P4-201ENST00000438388 335 ntBASIC5.51□□□□□ -1.53
UBA52P62987 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC5.51□□□□□ -1.53
UBA52P62987 AC108751.3-201ENST00000461814 1020 ntBASIC5.51□□□□□ -1.53
UBA52P62987 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC5.51□□□□□ -1.53
UBA52P62987 RN7SL216P-201ENST00000471607 298 ntBASIC5.51□□□□□ -1.53
UBA52P62987 AL355032.1-201ENST00000472981 438 ntBASIC5.51□□□□□ -1.53
UBA52P62987 RPS27P20-201ENST00000492051 246 ntBASIC5.51□□□□□ -1.53
UBA52P62987 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC5.51□□□□□ -1.53
UBA52P62987 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC5.51□□□□□ -1.53
UBA52P62987 AC087273.2-201ENST00000519038 634 ntTSL 3 BASIC5.51□□□□□ -1.53
UBA52P62987 IGKV2-4-201ENST00000523070 340 ntBASIC5.51□□□□□ -1.53
UBA52P62987 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
UBA52P62987 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC5.51□□□□□ -1.53
UBA52P62987 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC5.51□□□□□ -1.53
UBA52P62987 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC5.51□□□□□ -1.53
UBA52P62987 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC5.51□□□□□ -1.53
UBA52P62987 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
UBA52P62987 AC092718.2-202ENST00000566390 556 ntTSL 4 BASIC5.51□□□□□ -1.53
UBA52P62987 AC025283.1-201ENST00000572039 734 ntBASIC5.51□□□□□ -1.53
UBA52P62987 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC5.51□□□□□ -1.53
UBA52P62987 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC5.51□□□□□ -1.53
UBA52P62987 AC007255.2-201ENST00000604053 631 ntBASIC5.51□□□□□ -1.53
UBA52P62987 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC5.51□□□□□ -1.53
UBA52P62987 MIR6861-201ENST00000618657 64 ntBASIC5.51□□□□□ -1.53
UBA52P62987 AC073592.6-201ENST00000624271 415 ntBASIC5.51□□□□□ -1.53
UBA52P62987 5S_rRNA.29-201ENST00000641250 107 ntBASIC5.51□□□□□ -1.53
UBA52P62987 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
UBA52P62987 SHQ1P1-201ENST00000437111 1544 ntBASIC5.51□□□□□ -1.53
UBA52P62987 AC010624.4-201ENST00000597606 1351 ntBASIC5.51□□□□□ -1.53
UBA52P62987 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
UBA52P62987 POT1-202ENST00000393329 3950 ntTSL 5 BASIC5.51□□□□□ -1.53
UBA52P62987 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
UBA52P62987 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
UBA52P62987 AL355834.1-201ENST00000556602 3965 ntBASIC5.5□□□□□ -1.53
UBA52P62987 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
UBA52P62987 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.5□□□□□ -1.53
UBA52P62987 AC123769.1-201ENST00000530992 3192 ntBASIC5.5□□□□□ -1.53
UBA52P62987 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
UBA52P62987 AP002800.1-201ENST00000624982 2225 ntBASIC5.5□□□□□ -1.53
UBA52P62987 AC093671.1-201ENST00000624981 2929 ntBASIC5.5□□□□□ -1.53
UBA52P62987 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
UBA52P62987 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
UBA52P62987 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC5.5□□□□□ -1.53
UBA52P62987 RN7SKP186-201ENST00000365371 303 ntBASIC5.5□□□□□ -1.53
UBA52P62987 PFKFB1-201ENST00000374992 1156 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
UBA52P62987 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms