Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 RANP2-201ENST00000456833 229 ntBASIC6.09□□□□□ -1.43
PKNOX1P55347 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
PKNOX1P55347 AC009567.2-201ENST00000502989 349 ntBASIC6.09□□□□□ -1.43
PKNOX1P55347 CYP4F27P-201ENST00000514557 494 ntBASIC6.09□□□□□ -1.43
PKNOX1P55347 AC008429.4-201ENST00000521201 182 ntBASIC6.09□□□□□ -1.43
PKNOX1P55347 AP004607.5-201ENST00000532034 217 ntBASIC6.09□□□□□ -1.43
PKNOX1P55347 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
PKNOX1P55347 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
PKNOX1P55347 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
PKNOX1P55347 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC6.09□□□□□ -1.43
PKNOX1P55347 RN7SL657P-201ENST00000582431 293 ntBASIC6.09□□□□□ -1.43
PKNOX1P55347 AC027229.1-201ENST00000583887 253 ntBASIC6.09□□□□□ -1.43
PKNOX1P55347 AC005332.4-201ENST00000592752 579 ntBASIC6.09□□□□□ -1.43
PKNOX1P55347 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC6.09□□□□□ -1.43
PKNOX1P55347 AL589743.6-201ENST00000611025 117 ntBASIC6.09□□□□□ -1.43
PKNOX1P55347 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC6.09□□□□□ -1.43
PKNOX1P55347 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
PKNOX1P55347 OR7E91P-202ENST00000642062 1198 ntBASIC6.09□□□□□ -1.43
PKNOX1P55347 AC087516.1-201ENST00000561236 2428 ntBASIC6.09□□□□□ -1.43
PKNOX1P55347 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
PKNOX1P55347 AP001541.1-201ENST00000623322 1904 ntBASIC6.09□□□□□ -1.44
PKNOX1P55347 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
PKNOX1P55347 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PKNOX1P55347 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PKNOX1P55347 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PKNOX1P55347 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.08□□□□□ -1.44
PKNOX1P55347 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
PKNOX1P55347 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PKNOX1P55347 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.08□□□□□ -1.44
PKNOX1P55347 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PKNOX1P55347 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC6.08□□□□□ -1.44
PKNOX1P55347 AC092634.1-201ENST00000366505 199 ntBASIC6.08□□□□□ -1.44
PKNOX1P55347 SEPT7P2-202ENST00000398921 823 ntBASIC6.08□□□□□ -1.44
PKNOX1P55347 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC6.08□□□□□ -1.44
PKNOX1P55347 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PKNOX1P55347 NME1P1-201ENST00000420914 382 ntBASIC6.08□□□□□ -1.44
PKNOX1P55347 ELOBP4-201ENST00000423418 296 ntBASIC6.08□□□□□ -1.44
PKNOX1P55347 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC6.08□□□□□ -1.44
PKNOX1P55347 AL390879.1-201ENST00000439143 386 ntBASIC6.08□□□□□ -1.44
PKNOX1P55347 GAPDHP37-201ENST00000442317 968 ntBASIC6.08□□□□□ -1.44
PKNOX1P55347 AC016908.1-201ENST00000442571 1219 ntBASIC6.08□□□□□ -1.44
PKNOX1P55347 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PKNOX1P55347 RN7SL83P-201ENST00000468131 297 ntBASIC6.08□□□□□ -1.44
PKNOX1P55347 RN7SL413P-201ENST00000482700 297 ntBASIC6.08□□□□□ -1.44
PKNOX1P55347 AL035690.1-201ENST00000490892 383 ntBASIC6.08□□□□□ -1.44
PKNOX1P55347 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC6.08□□□□□ -1.44
PKNOX1P55347 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC6.08□□□□□ -1.44
PKNOX1P55347 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC6.08□□□□□ -1.44
PKNOX1P55347 AC005833.3-202ENST00000544741 770 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
PKNOX1P55347 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC6.08□□□□□ -1.44
PKNOX1P55347 AC023080.1-201ENST00000551663 931 ntBASIC6.08□□□□□ -1.44
PKNOX1P55347 ACYP1-204ENST00000555135 639 ntTSL 3 BASIC6.08□□□□□ -1.44
PKNOX1P55347 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC6.08□□□□□ -1.44
PKNOX1P55347 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC6.08□□□□□ -1.44
PKNOX1P55347 GLYATL1P2-202ENST00000588046 902 ntBASIC6.08□□□□□ -1.44
PKNOX1P55347 DYNLL1P1-201ENST00000595442 269 ntBASIC6.08□□□□□ -1.44
PKNOX1P55347 AC027334.1-201ENST00000603257 310 ntBASIC6.08□□□□□ -1.44
PKNOX1P55347 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC6.08□□□□□ -1.44
PKNOX1P55347 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PKNOX1P55347 MIR6849-201ENST00000618543 69 ntBASIC6.08□□□□□ -1.44
PKNOX1P55347 AC009120.7-201ENST00000623452 780 ntBASIC6.08□□□□□ -1.44
PKNOX1P55347 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PKNOX1P55347 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC6.08□□□□□ -1.44
PKNOX1P55347 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
PKNOX1P55347 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PKNOX1P55347 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.08□□□□□ -1.44
PKNOX1P55347 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PKNOX1P55347 FANCD2P2-201ENST00000437591 1400 ntBASIC6.08□□□□□ -1.44
PKNOX1P55347 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PKNOX1P55347 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PKNOX1P55347 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
PKNOX1P55347 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PKNOX1P55347 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC6.07□□□□□ -1.44
PKNOX1P55347 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.07□□□□□ -1.44
PKNOX1P55347 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC6.07□□□□□ -1.44
PKNOX1P55347 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PKNOX1P55347 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
PKNOX1P55347 SAMMSON-210ENST00000641260 1308 ntBASIC6.07□□□□□ -1.44
PKNOX1P55347 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PKNOX1P55347 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PKNOX1P55347 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.07□□□□□ -1.44
PKNOX1P55347 AC015977.1-201ENST00000418887 292 ntBASIC6.07□□□□□ -1.44
PKNOX1P55347 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.07□□□□□ -1.44
PKNOX1P55347 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC6.07□□□□□ -1.44
PKNOX1P55347 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC6.07□□□□□ -1.44
PKNOX1P55347 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PKNOX1P55347 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC6.07□□□□□ -1.44
PKNOX1P55347 NPM1P9-201ENST00000453156 844 ntBASIC6.07□□□□□ -1.44
PKNOX1P55347 UCK2-205ENST00000469256 753 ntTSL 3 BASIC6.07□□□□□ -1.44
PKNOX1P55347 AC128716.1-201ENST00000475129 166 ntBASIC6.07□□□□□ -1.44
PKNOX1P55347 AL079303.1-201ENST00000486611 463 ntBASIC6.07□□□□□ -1.44
PKNOX1P55347 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC6.07□□□□□ -1.44
PKNOX1P55347 AC093816.1-201ENST00000515076 913 ntBASIC6.07□□□□□ -1.44
PKNOX1P55347 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PKNOX1P55347 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
PKNOX1P55347 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
PKNOX1P55347 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC6.07□□□□□ -1.44
PKNOX1P55347 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.07□□□□□ -1.44
PKNOX1P55347 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
PKNOX1P55347 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms