Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
APOC4P55056 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
APOC4P55056 FO082842.1-201ENST00000423552 1370 ntBASIC4.76□□□□□ -1.65
APOC4P55056 PPBPP2-201ENST00000513150 1362 ntBASIC4.76□□□□□ -1.65
APOC4P55056 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
APOC4P55056 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC4.76□□□□□ -1.65
APOC4P55056 AC092111.1-201ENST00000618256 3358 ntBASIC4.76□□□□□ -1.65
APOC4P55056 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
APOC4P55056 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC4.76□□□□□ -1.65
APOC4P55056 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
APOC4P55056 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
APOC4P55056 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
APOC4P55056 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC4.75□□□□□ -1.65
APOC4P55056 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
APOC4P55056 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
APOC4P55056 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC4.75□□□□□ -1.65
APOC4P55056 EEF1A1P12-201ENST00000443590 1346 ntBASIC4.75□□□□□ -1.65
APOC4P55056 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
APOC4P55056 CR383656.5-201ENST00000547616 1340 ntBASIC4.75□□□□□ -1.65
APOC4P55056 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC4.75□□□□□ -1.65
APOC4P55056 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC4.75□□□□□ -1.65
APOC4P55056 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC4.75□□□□□ -1.65
APOC4P55056 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
APOC4P55056 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
APOC4P55056 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
APOC4P55056 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
APOC4P55056 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
APOC4P55056 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC4.75□□□□□ -1.65
APOC4P55056 MIPEPP2-201ENST00000422560 1819 ntBASIC4.75□□□□□ -1.65
APOC4P55056 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
APOC4P55056 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
APOC4P55056 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
APOC4P55056 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC4.75□□□□□ -1.65
APOC4P55056 MIR640-201ENST00000385086 96 ntBASIC4.75□□□□□ -1.65
APOC4P55056 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC4.75□□□□□ -1.65
APOC4P55056 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC4.75□□□□□ -1.65
APOC4P55056 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC4.75□□□□□ -1.65
APOC4P55056 AL139415.1-201ENST00000424862 352 ntBASIC4.75□□□□□ -1.65
APOC4P55056 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC4.75□□□□□ -1.65
APOC4P55056 AC099782.1-201ENST00000425889 474 ntBASIC4.75□□□□□ -1.65
APOC4P55056 AC083862.1-201ENST00000427378 1242 ntBASIC4.75□□□□□ -1.65
APOC4P55056 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC4.75□□□□□ -1.65
APOC4P55056 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC4.75□□□□□ -1.65
APOC4P55056 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
APOC4P55056 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC4.75□□□□□ -1.65
APOC4P55056 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC4.75□□□□□ -1.65
APOC4P55056 VN1R38P-201ENST00000450265 887 ntBASIC4.75□□□□□ -1.65
APOC4P55056 OR52E7P-201ENST00000452394 933 ntBASIC4.75□□□□□ -1.65
APOC4P55056 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC4.75□□□□□ -1.65
APOC4P55056 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC4.75□□□□□ -1.65
APOC4P55056 RN7SL552P-201ENST00000462094 276 ntBASIC4.75□□□□□ -1.65
APOC4P55056 RPL5P14-201ENST00000494197 878 ntBASIC4.75□□□□□ -1.65
APOC4P55056 GUSBP9-201ENST00000510138 584 ntBASIC4.75□□□□□ -1.65
APOC4P55056 AC106800.3-201ENST00000511389 308 ntBASIC4.75□□□□□ -1.65
APOC4P55056 RNA5SP418-201ENST00000515951 117 ntBASIC4.75□□□□□ -1.65
APOC4P55056 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC4.75□□□□□ -1.65
APOC4P55056 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC4.75□□□□□ -1.65
APOC4P55056 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC4.75□□□□□ -1.65
APOC4P55056 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC4.75□□□□□ -1.65
APOC4P55056 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
APOC4P55056 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
APOC4P55056 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC4.75□□□□□ -1.65
APOC4P55056 AC107958.1-201ENST00000556576 290 ntBASIC4.75□□□□□ -1.65
APOC4P55056 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC4.75□□□□□ -1.65
APOC4P55056 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC4.75□□□□□ -1.65
APOC4P55056 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC4.75□□□□□ -1.65
APOC4P55056 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC4.75□□□□□ -1.65
APOC4P55056 AL953862.2-201ENST00000603089 820 ntBASIC4.75□□□□□ -1.65
APOC4P55056 AL352984.2-201ENST00000611153 546 ntBASIC4.75□□□□□ -1.65
APOC4P55056 AL591926.1-201ENST00000620542 217 ntBASIC4.75□□□□□ -1.65
APOC4P55056 AC012653.2-201ENST00000621880 420 ntBASIC4.75□□□□□ -1.65
APOC4P55056 AC073592.6-201ENST00000624271 415 ntBASIC4.75□□□□□ -1.65
APOC4P55056 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC4.75□□□□□ -1.65
APOC4P55056 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC4.75□□□□□ -1.65
APOC4P55056 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC4.75□□□□□ -1.65
APOC4P55056 CASC19-243ENST00000641588 1546 ntBASIC4.75□□□□□ -1.65
APOC4P55056 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
APOC4P55056 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
APOC4P55056 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
APOC4P55056 ZNF101P1-201ENST00000435701 1720 ntBASIC4.75□□□□□ -1.65
APOC4P55056 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
APOC4P55056 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC4.74□□□□□ -1.65
APOC4P55056 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
APOC4P55056 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
APOC4P55056 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
APOC4P55056 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC4.74□□□□□ -1.65
APOC4P55056 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
APOC4P55056 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
APOC4P55056 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
APOC4P55056 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
APOC4P55056 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
APOC4P55056 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC4.74□□□□□ -1.65
APOC4P55056 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
APOC4P55056 AP000547.3-204ENST00000588548 2523 ntBASIC4.74□□□□□ -1.65
APOC4P55056 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
APOC4P55056 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
APOC4P55056 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
APOC4P55056 RPL11P4-201ENST00000332269 436 ntBASIC4.74□□□□□ -1.65
APOC4P55056 FAM32BP-201ENST00000344033 333 ntBASIC4.74□□□□□ -1.65
APOC4P55056 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms