Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC7.18□□□□□ -1.26
HMGCS2P54868 ZNF619P1-201ENST00000446539 752 ntBASIC7.18□□□□□ -1.26
HMGCS2P54868 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC7.18□□□□□ -1.26
HMGCS2P54868 RN7SL177P-201ENST00000476596 299 ntBASIC7.18□□□□□ -1.26
HMGCS2P54868 RN7SL717P-201ENST00000478343 297 ntBASIC7.18□□□□□ -1.26
HMGCS2P54868 AC092824.1-201ENST00000483524 576 ntBASIC7.18□□□□□ -1.26
HMGCS2P54868 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC7.18□□□□□ -1.26
HMGCS2P54868 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC7.18□□□□□ -1.26
HMGCS2P54868 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC7.18□□□□□ -1.26
HMGCS2P54868 AC008555.7-201ENST00000605008 583 ntBASIC7.18□□□□□ -1.26
HMGCS2P54868 FAM72A-208ENST00000607379 1139 ntBASIC7.18□□□□□ -1.26
HMGCS2P54868 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC7.18□□□□□ -1.26
HMGCS2P54868 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC7.18□□□□□ -1.26
HMGCS2P54868 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
HMGCS2P54868 CIR1P2-201ENST00000514821 1342 ntBASIC7.18□□□□□ -1.26
HMGCS2P54868 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
HMGCS2P54868 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
HMGCS2P54868 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
HMGCS2P54868 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC7.18□□□□□ -1.26
HMGCS2P54868 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC7.18□□□□□ -1.26
HMGCS2P54868 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
HMGCS2P54868 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
HMGCS2P54868 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC7.17□□□□□ -1.26
HMGCS2P54868 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC7.17□□□□□ -1.26
HMGCS2P54868 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
HMGCS2P54868 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
HMGCS2P54868 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
HMGCS2P54868 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
HMGCS2P54868 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
HMGCS2P54868 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
HMGCS2P54868 SNORA43.1-201ENST00000364863 140 ntBASIC7.17□□□□□ -1.26
HMGCS2P54868 CRP-204ENST00000368112 787 ntTSL 2 BASIC7.17□□□□□ -1.26
HMGCS2P54868 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
HMGCS2P54868 AURKA-208ENST00000395915 2114 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
HMGCS2P54868 AL445238.1-204ENST00000400311 463 ntBASIC7.17□□□□□ -1.26
HMGCS2P54868 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
HMGCS2P54868 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC7.17□□□□□ -1.26
HMGCS2P54868 AL035660.1-201ENST00000422041 222 ntBASIC7.17□□□□□ -1.26
HMGCS2P54868 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC7.17□□□□□ -1.26
HMGCS2P54868 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
HMGCS2P54868 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC7.17□□□□□ -1.26
HMGCS2P54868 VN1R110P-201ENST00000438988 971 ntBASIC7.17□□□□□ -1.26
HMGCS2P54868 NPM1P19-201ENST00000450070 712 ntBASIC7.17□□□□□ -1.26
HMGCS2P54868 VN1R38P-201ENST00000450265 887 ntBASIC7.17□□□□□ -1.26
HMGCS2P54868 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC7.17□□□□□ -1.26
HMGCS2P54868 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC7.17□□□□□ -1.26
HMGCS2P54868 IGHVIII-67-4-201ENST00000524281 296 ntBASIC7.17□□□□□ -1.26
HMGCS2P54868 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
HMGCS2P54868 LINC01493-202ENST00000533575 581 ntTSL 4 BASIC7.17□□□□□ -1.26
HMGCS2P54868 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC7.17□□□□□ -1.26
HMGCS2P54868 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC7.17□□□□□ -1.26
HMGCS2P54868 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC7.17□□□□□ -1.26
HMGCS2P54868 AC005244.1-201ENST00000582566 339 ntBASIC7.17□□□□□ -1.26
HMGCS2P54868 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC7.17□□□□□ -1.26
HMGCS2P54868 AL645933.2-201ENST00000606743 1207 ntBASIC7.17□□□□□ -1.26
HMGCS2P54868 AL445647.2-201ENST00000615170 130 ntBASIC7.17□□□□□ -1.26
HMGCS2P54868 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC7.17□□□□□ -1.26
HMGCS2P54868 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
HMGCS2P54868 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
HMGCS2P54868 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
HMGCS2P54868 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
HMGCS2P54868 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
HMGCS2P54868 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
HMGCS2P54868 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC7.17□□□□□ -1.26
HMGCS2P54868 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC7.17□□□□□ -1.26
HMGCS2P54868 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
HMGCS2P54868 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC7.17□□□□□ -1.26
HMGCS2P54868 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
HMGCS2P54868 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
HMGCS2P54868 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
HMGCS2P54868 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
HMGCS2P54868 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
HMGCS2P54868 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC7.16□□□□□ -1.26
HMGCS2P54868 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
HMGCS2P54868 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
HMGCS2P54868 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
HMGCS2P54868 CD2-202ENST00000369478 1609 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
HMGCS2P54868 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
HMGCS2P54868 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
HMGCS2P54868 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC7.16□□□□□ -1.26
HMGCS2P54868 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC7.16□□□□□ -1.26
HMGCS2P54868 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC7.16□□□□□ -1.26
HMGCS2P54868 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC7.16□□□□□ -1.26
HMGCS2P54868 EPS8-213ENST00000543612 2965 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
HMGCS2P54868 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC7.16□□□□□ -1.26
HMGCS2P54868 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC7.16□□□□□ -1.26
HMGCS2P54868 AC119674.1-202ENST00000641333 1860 ntBASIC7.16□□□□□ -1.26
HMGCS2P54868 RNU1-150P-201ENST00000362491 162 ntBASIC7.16□□□□□ -1.26
HMGCS2P54868 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
HMGCS2P54868 BX284632.2-201ENST00000421091 399 ntBASIC7.16□□□□□ -1.26
HMGCS2P54868 GAPDHP75-201ENST00000433910 943 ntBASIC7.16□□□□□ -1.26
HMGCS2P54868 AL512605.1-202ENST00000441919 381 ntBASIC7.16□□□□□ -1.26
HMGCS2P54868 AC016908.1-201ENST00000442571 1219 ntBASIC7.16□□□□□ -1.26
HMGCS2P54868 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
HMGCS2P54868 AL359955.2-201ENST00000445380 353 ntBASIC7.16□□□□□ -1.26
HMGCS2P54868 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
HMGCS2P54868 AC023141.9-201ENST00000458734 412 ntBASIC7.16□□□□□ -1.26
HMGCS2P54868 AC110749.1-201ENST00000462007 357 ntBASIC7.16□□□□□ -1.26
HMGCS2P54868 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC7.16□□□□□ -1.26
HMGCS2P54868 LECT2-205ENST00000522943 574 ntTSL 3 BASIC7.16□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms