Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC7.51□□□□□ -1.21
PMS1P54277 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
PMS1P54277 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC7.51□□□□□ -1.21
PMS1P54277 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
PMS1P54277 AC008957.3-201ENST00000624112 2242 ntBASIC7.51□□□□□ -1.21
PMS1P54277 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC7.51□□□□□ -1.21
PMS1P54277 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC7.51□□□□□ -1.21
PMS1P54277 NXF2B-205ENST00000618881 3193 ntTSL 2 BASIC7.51□□□□□ -1.21
PMS1P54277 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC7.51□□□□□ -1.21
PMS1P54277 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
PMS1P54277 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
PMS1P54277 NUSAP1-202ENST00000414849 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
PMS1P54277 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
PMS1P54277 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
PMS1P54277 AC022905.1-201ENST00000503430 3048 ntBASIC7.5□□□□□ -1.21
PMS1P54277 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC7.5□□□□□ -1.21
PMS1P54277 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
PMS1P54277 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
PMS1P54277 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC7.5□□□□□ -1.21
PMS1P54277 ZNF840P-201ENST00000504759 1996 ntBASIC7.5□□□□□ -1.21
PMS1P54277 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
PMS1P54277 OR10A2-202ENST00000641461 5390 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
PMS1P54277 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
PMS1P54277 ATP5J2-201ENST00000292475 607 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
PMS1P54277 DEFB4A-201ENST00000302247 380 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
PMS1P54277 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
PMS1P54277 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
PMS1P54277 RNU5B-4P-201ENST00000363508 111 ntBASIC7.5□□□□□ -1.21
PMS1P54277 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
PMS1P54277 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
PMS1P54277 RPL5P19-201ENST00000404228 893 ntBASIC7.5□□□□□ -1.21
PMS1P54277 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC7.5□□□□□ -1.21
PMS1P54277 AL590095.1-201ENST00000420049 436 ntTSL 3 BASIC7.5□□□□□ -1.21
PMS1P54277 CRYGGP-201ENST00000443337 145 ntBASIC7.5□□□□□ -1.21
PMS1P54277 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC7.5□□□□□ -1.21
PMS1P54277 AP001469.2-201ENST00000444966 390 ntTSL 5 BASIC7.5□□□□□ -1.21
PMS1P54277 AL358794.1-201ENST00000445689 381 ntBASIC7.5□□□□□ -1.21
PMS1P54277 AC044797.1-201ENST00000445744 679 ntBASIC7.5□□□□□ -1.21
PMS1P54277 OR7E7P-201ENST00000455678 1012 ntBASIC7.5□□□□□ -1.21
PMS1P54277 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC7.5□□□□□ -1.21
PMS1P54277 TOPORSLP1-201ENST00000467693 2102 ntBASIC7.5□□□□□ -1.21
PMS1P54277 HMGB1P3-201ENST00000502802 616 ntBASIC7.5□□□□□ -1.21
PMS1P54277 AC092435.1-202ENST00000512752 518 ntTSL 3 BASIC7.5□□□□□ -1.21
PMS1P54277 DCAF13P2-201ENST00000514188 555 ntBASIC7.5□□□□□ -1.21
PMS1P54277 RNU6-319P-201ENST00000516025 108 ntBASIC7.5□□□□□ -1.21
PMS1P54277 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC7.5□□□□□ -1.21
PMS1P54277 VPS37A-208ENST00000521005 479 ntTSL 3 BASIC7.5□□□□□ -1.21
PMS1P54277 C8orf44-205ENST00000521889 598 ntAPPRIS ALT2 TSL 3 BASIC7.5□□□□□ -1.21
PMS1P54277 IGHVIII-25-1-201ENST00000522143 241 ntBASIC7.5□□□□□ -1.21
PMS1P54277 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC7.5□□□□□ -1.21
PMS1P54277 AC018953.1-201ENST00000523265 730 ntTSL 2 BASIC7.5□□□□□ -1.21
PMS1P54277 OR10V3P-201ENST00000525712 725 ntBASIC7.5□□□□□ -1.21
PMS1P54277 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC7.5□□□□□ -1.21
PMS1P54277 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC7.5□□□□□ -1.21
PMS1P54277 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC7.5□□□□□ -1.21
PMS1P54277 AC010735.1-201ENST00000567305 1026 ntBASIC7.5□□□□□ -1.21
PMS1P54277 AC108097.1-201ENST00000568275 534 ntTSL 4 BASIC7.5□□□□□ -1.21
PMS1P54277 AC004232.1-201ENST00000571388 208 ntBASIC7.5□□□□□ -1.21
PMS1P54277 AC027455.1-201ENST00000574104 594 ntBASIC7.5□□□□□ -1.21
PMS1P54277 AC008551.1-201ENST00000575612 405 ntTSL 5 BASIC7.5□□□□□ -1.21
PMS1P54277 AL031429.2-201ENST00000602605 649 ntBASIC7.5□□□□□ -1.21
PMS1P54277 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC7.5□□□□□ -1.21
PMS1P54277 AC090617.9-201ENST00000623751 147 ntBASIC7.5□□□□□ -1.21
PMS1P54277 AGXT2-201ENST00000231420 2364 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
PMS1P54277 NPL-212ENST00000614468 2376 ntTSL 5 BASIC7.5□□□□□ -1.21
PMS1P54277 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
PMS1P54277 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
PMS1P54277 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
PMS1P54277 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
PMS1P54277 PRDX6-201ENST00000340385 1751 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
PMS1P54277 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC7.5□□□□□ -1.21
PMS1P54277 PZP-201ENST00000261336 4610 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
PMS1P54277 AL359263.1-201ENST00000441188 2796 ntBASIC7.5□□□□□ -1.21
PMS1P54277 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
PMS1P54277 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
PMS1P54277 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC7.5□□□□□ -1.21
PMS1P54277 HSP90AA2P-201ENST00000530115 2196 ntBASIC7.5□□□□□ -1.21
PMS1P54277 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC7.5□□□□□ -1.21
PMS1P54277 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC7.5□□□□□ -1.21
PMS1P54277 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC7.5□□□□□ -1.21
PMS1P54277 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
PMS1P54277 AL355578.1-201ENST00000607405 1328 ntBASIC7.5□□□□□ -1.21
PMS1P54277 ZNF585B-203ENST00000527838 2732 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
PMS1P54277 PTPRD-AS1-201ENST00000430766 1959 ntTSL 2 BASIC7.5□□□□□ -1.21
PMS1P54277 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC7.49□□□□□ -1.21
PMS1P54277 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
PMS1P54277 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC7.49□□□□□ -1.21
PMS1P54277 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
PMS1P54277 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC7.49□□□□□ -1.21
PMS1P54277 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
PMS1P54277 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
PMS1P54277 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
PMS1P54277 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC7.49□□□□□ -1.21
PMS1P54277 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
PMS1P54277 PABPC1P8-201ENST00000452851 2086 ntBASIC7.49□□□□□ -1.21
PMS1P54277 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC7.49□□□□□ -1.21
PMS1P54277 HYPM-201ENST00000341016 501 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
PMS1P54277 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC7.49□□□□□ -1.21
PMS1P54277 PDCL3P5-201ENST00000398028 722 ntBASIC7.49□□□□□ -1.21
PMS1P54277 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC7.49□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms