Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 NATP-201ENST00000523491 878 ntBASIC6.21□□□□□ -1.42
PDX1P52945 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC6.21□□□□□ -1.42
PDX1P52945 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC6.21□□□□□ -1.42
PDX1P52945 ASB8-203ENST00000535988 679 ntTSL 2 BASIC6.21□□□□□ -1.42
PDX1P52945 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC6.21□□□□□ -1.42
PDX1P52945 AC084033.1-201ENST00000550830 633 ntBASIC6.21□□□□□ -1.42
PDX1P52945 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC6.21□□□□□ -1.42
PDX1P52945 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC6.21□□□□□ -1.42
PDX1P52945 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC6.21□□□□□ -1.42
PDX1P52945 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
PDX1P52945 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC6.21□□□□□ -1.42
PDX1P52945 OR7A11P-201ENST00000597719 953 ntBASIC6.21□□□□□ -1.42
PDX1P52945 AC067773.1-201ENST00000603284 1094 ntBASIC6.21□□□□□ -1.42
PDX1P52945 AL356986.1-201ENST00000604085 341 ntBASIC6.21□□□□□ -1.42
PDX1P52945 SNX18P12-201ENST00000624821 759 ntBASIC6.21□□□□□ -1.42
PDX1P52945 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC6.21□□□□□ -1.42
PDX1P52945 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC6.21□□□□□ -1.42
PDX1P52945 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC6.21□□□□□ -1.42
PDX1P52945 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
PDX1P52945 AC022905.1-201ENST00000503430 3048 ntBASIC6.21□□□□□ -1.42
PDX1P52945 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
PDX1P52945 EEF1A1P21-201ENST00000512363 1344 ntBASIC6.21□□□□□ -1.42
PDX1P52945 AL359694.2-201ENST00000567753 1615 ntBASIC6.21□□□□□ -1.42
PDX1P52945 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
PDX1P52945 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
PDX1P52945 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
PDX1P52945 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
PDX1P52945 AL139384.2-201ENST00000613809 3590 ntBASIC6.21□□□□□ -1.42
PDX1P52945 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC6.21□□□□□ -1.42
PDX1P52945 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.42
PDX1P52945 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PDX1P52945 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PDX1P52945 AC007406.5-201ENST00000570140 3170 ntBASIC6.2□□□□□ -1.42
PDX1P52945 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC6.2□□□□□ -1.42
PDX1P52945 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
PDX1P52945 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
PDX1P52945 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
PDX1P52945 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
PDX1P52945 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PDX1P52945 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC6.2□□□□□ -1.42
PDX1P52945 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC6.2□□□□□ -1.42
PDX1P52945 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PDX1P52945 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
PDX1P52945 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
PDX1P52945 CDY5P-201ENST00000411487 1580 ntBASIC6.2□□□□□ -1.42
PDX1P52945 CDY9P-201ENST00000451397 1580 ntBASIC6.2□□□□□ -1.42
PDX1P52945 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
PDX1P52945 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PDX1P52945 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC6.2□□□□□ -1.42
PDX1P52945 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
PDX1P52945 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC6.2□□□□□ -1.42
PDX1P52945 RN7SKP78-201ENST00000364711 318 ntBASIC6.2□□□□□ -1.42
PDX1P52945 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC6.2□□□□□ -1.42
PDX1P52945 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC6.2□□□□□ -1.42
PDX1P52945 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC6.2□□□□□ -1.42
PDX1P52945 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC6.2□□□□□ -1.42
PDX1P52945 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC6.2□□□□□ -1.42
PDX1P52945 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC6.2□□□□□ -1.42
PDX1P52945 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC6.2□□□□□ -1.42
PDX1P52945 AC242426.1-201ENST00000435270 960 ntBASIC6.2□□□□□ -1.42
PDX1P52945 AC010240.2-201ENST00000445363 1205 ntBASIC6.2□□□□□ -1.42
PDX1P52945 AC068228.1-201ENST00000461723 211 ntBASIC6.2□□□□□ -1.42
PDX1P52945 SNX18P24-201ENST00000505249 671 ntBASIC6.2□□□□□ -1.42
PDX1P52945 AC131392.1-201ENST00000506490 633 ntBASIC6.2□□□□□ -1.42
PDX1P52945 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC6.2□□□□□ -1.42
PDX1P52945 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC6.2□□□□□ -1.42
PDX1P52945 FAU-203ENST00000525297 355 ntTSL 5 BASIC6.2□□□□□ -1.42
PDX1P52945 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC6.2□□□□□ -1.42
PDX1P52945 MED21-206ENST00000546323 575 ntTSL 3 BASIC6.2□□□□□ -1.42
PDX1P52945 AC125612.1-201ENST00000547580 377 ntBASIC6.2□□□□□ -1.42
PDX1P52945 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC6.2□□□□□ -1.42
PDX1P52945 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC6.2□□□□□ -1.42
PDX1P52945 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC6.2□□□□□ -1.42
PDX1P52945 AC005393.1-201ENST00000617916 584 ntBASIC6.2□□□□□ -1.42
PDX1P52945 AC012653.2-201ENST00000621880 420 ntBASIC6.2□□□□□ -1.42
PDX1P52945 AC087269.2-201ENST00000641764 975 ntBASIC6.2□□□□□ -1.42
PDX1P52945 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PDX1P52945 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PDX1P52945 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
PDX1P52945 AC025809.2-201ENST00000625085 1802 ntBASIC6.2□□□□□ -1.42
PDX1P52945 LRRC37A16P-202ENST00000586022 3725 ntBASIC6.2□□□□□ -1.42
PDX1P52945 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
PDX1P52945 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC6.19□□□□□ -1.42
PDX1P52945 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PDX1P52945 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.19□□□□□ -1.42
PDX1P52945 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC6.19□□□□□ -1.42
PDX1P52945 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
PDX1P52945 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
PDX1P52945 LCN1P2-201ENST00000372030 223 ntBASIC6.19□□□□□ -1.42
PDX1P52945 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
PDX1P52945 SMARCE1P6-201ENST00000398372 1216 ntBASIC6.19□□□□□ -1.42
PDX1P52945 AL049697.3-201ENST00000406493 982 ntBASIC6.19□□□□□ -1.42
PDX1P52945 RN7SKP281-201ENST00000410472 352 ntBASIC6.19□□□□□ -1.42
PDX1P52945 RPL36P18-201ENST00000419316 318 ntBASIC6.19□□□□□ -1.42
PDX1P52945 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC6.19□□□□□ -1.42
PDX1P52945 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
PDX1P52945 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC6.19□□□□□ -1.42
PDX1P52945 AC112492.2-201ENST00000432774 1030 ntBASIC6.19□□□□□ -1.42
PDX1P52945 TPTE2P1-204ENST00000435256 593 ntBASIC6.19□□□□□ -1.42
PDX1P52945 MTCO3P17-201ENST00000443775 513 ntBASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms