Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC6.86□□□□□ -1.31
NEK3P51956 CDC42P6-201ENST00000421246 576 ntBASIC6.86□□□□□ -1.31
NEK3P51956 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC6.86□□□□□ -1.31
NEK3P51956 RPL17P35-201ENST00000432217 549 ntBASIC6.86□□□□□ -1.31
NEK3P51956 AL590128.1-201ENST00000433407 286 ntBASIC6.86□□□□□ -1.31
NEK3P51956 AL451136.1-201ENST00000435399 325 ntBASIC6.86□□□□□ -1.31
NEK3P51956 AC013403.1-201ENST00000436954 263 ntBASIC6.86□□□□□ -1.31
NEK3P51956 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC6.86□□□□□ -1.31
NEK3P51956 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC6.86□□□□□ -1.31
NEK3P51956 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC6.86□□□□□ -1.31
NEK3P51956 MTND2P25-201ENST00000449028 610 ntBASIC6.86□□□□□ -1.31
NEK3P51956 VNN3-210ENST00000450865 596 ntTSL 4 BASIC6.86□□□□□ -1.31
NEK3P51956 MEF2AP1-201ENST00000454867 863 ntBASIC6.86□□□□□ -1.31
NEK3P51956 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC6.86□□□□□ -1.31
NEK3P51956 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC6.86□□□□□ -1.31
NEK3P51956 RN7SL37P-201ENST00000490461 307 ntBASIC6.86□□□□□ -1.31
NEK3P51956 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC6.86□□□□□ -1.31
NEK3P51956 RN7SL187P-201ENST00000495587 303 ntBASIC6.86□□□□□ -1.31
NEK3P51956 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
NEK3P51956 SUMO2P4-201ENST00000504193 276 ntBASIC6.86□□□□□ -1.31
NEK3P51956 MTND3P24-201ENST00000506306 329 ntBASIC6.86□□□□□ -1.31
NEK3P51956 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC6.86□□□□□ -1.31
NEK3P51956 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC6.86□□□□□ -1.31
NEK3P51956 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC6.86□□□□□ -1.31
NEK3P51956 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC6.86□□□□□ -1.31
NEK3P51956 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC6.86□□□□□ -1.31
NEK3P51956 GNG2-203ENST00000553432 577 ntTSL 4 BASIC6.86□□□□□ -1.31
NEK3P51956 AL136520.1-202ENST00000555494 763 ntBASIC6.86□□□□□ -1.31
NEK3P51956 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC6.86□□□□□ -1.31
NEK3P51956 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC6.86□□□□□ -1.31
NEK3P51956 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC6.86□□□□□ -1.31
NEK3P51956 AL590032.1-201ENST00000604920 252 ntBASIC6.86□□□□□ -1.31
NEK3P51956 AL133445.2-201ENST00000611191 527 ntBASIC6.86□□□□□ -1.31
NEK3P51956 AC080188.3-201ENST00000624842 748 ntBASIC6.86□□□□□ -1.31
NEK3P51956 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC6.86□□□□□ -1.31
NEK3P51956 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC6.86□□□□□ -1.31
NEK3P51956 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
NEK3P51956 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
NEK3P51956 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC6.86□□□□□ -1.31
NEK3P51956 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
NEK3P51956 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
NEK3P51956 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
NEK3P51956 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
NEK3P51956 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
NEK3P51956 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC6.86□□□□□ -1.31
NEK3P51956 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
NEK3P51956 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC6.86□□□□□ -1.31
NEK3P51956 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC6.86□□□□□ -1.31
NEK3P51956 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC6.86□□□□□ -1.31
NEK3P51956 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC6.86□□□□□ -1.31
NEK3P51956 API5P1-201ENST00000424316 1510 ntBASIC6.86□□□□□ -1.31
NEK3P51956 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
NEK3P51956 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
NEK3P51956 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC6.85□□□□□ -1.31
NEK3P51956 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC6.85□□□□□ -1.31
NEK3P51956 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
NEK3P51956 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
NEK3P51956 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
NEK3P51956 RBPJP6-201ENST00000411556 1431 ntBASIC6.85□□□□□ -1.31
NEK3P51956 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC6.85□□□□□ -1.31
NEK3P51956 ZNF806-201ENST00000438300 1774 ntBASIC6.85□□□□□ -1.31
NEK3P51956 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
NEK3P51956 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
NEK3P51956 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
NEK3P51956 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
NEK3P51956 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
NEK3P51956 NEK2P2-201ENST00000438441 1338 ntBASIC6.85□□□□□ -1.31
NEK3P51956 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
NEK3P51956 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC6.85□□□□□ -1.31
NEK3P51956 AC007485.2-201ENST00000623493 1667 ntBASIC6.85□□□□□ -1.31
NEK3P51956 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
NEK3P51956 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
NEK3P51956 AC010894.1-201ENST00000313760 361 ntBASIC6.85□□□□□ -1.31
NEK3P51956 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
NEK3P51956 RNU1-5P-201ENST00000362684 144 ntBASIC6.85□□□□□ -1.31
NEK3P51956 SNORD51.1-201ENST00000365405 77 ntBASIC6.85□□□□□ -1.31
NEK3P51956 RGS5-202ENST00000367903 934 ntTSL 3 BASIC6.85□□□□□ -1.31
NEK3P51956 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
NEK3P51956 RN7SKP188-201ENST00000410789 317 ntBASIC6.85□□□□□ -1.31
NEK3P51956 AC096537.2-201ENST00000413707 714 ntBASIC6.85□□□□□ -1.31
NEK3P51956 MTND4LP17-201ENST00000414607 293 ntBASIC6.85□□□□□ -1.31
NEK3P51956 Z82198.3-201ENST00000421145 199 ntBASIC6.85□□□□□ -1.31
NEK3P51956 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC6.85□□□□□ -1.31
NEK3P51956 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC6.85□□□□□ -1.31
NEK3P51956 AC007563.3-201ENST00000433233 371 ntBASIC6.85□□□□□ -1.31
NEK3P51956 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC6.85□□□□□ -1.31
NEK3P51956 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
NEK3P51956 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC6.85□□□□□ -1.31
NEK3P51956 GAPDHP20-201ENST00000444107 1007 ntBASIC6.85□□□□□ -1.31
NEK3P51956 AL121578.2-201ENST00000448797 447 ntBASIC6.85□□□□□ -1.31
NEK3P51956 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC6.85□□□□□ -1.31
NEK3P51956 RN7SL83P-201ENST00000468131 297 ntBASIC6.85□□□□□ -1.31
NEK3P51956 RPL9P15-201ENST00000491096 532 ntBASIC6.85□□□□□ -1.31
NEK3P51956 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC6.85□□□□□ -1.31
NEK3P51956 RN7SL143P-201ENST00000496780 297 ntBASIC6.85□□□□□ -1.31
NEK3P51956 RN7SKP34-201ENST00000516142 244 ntBASIC6.85□□□□□ -1.31
NEK3P51956 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC6.85□□□□□ -1.31
NEK3P51956 AC084851.2-201ENST00000530377 364 ntBASIC6.85□□□□□ -1.31
NEK3P51956 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
NEK3P51956 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC6.85□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms