Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC8.69□□□□□ -1.02
RXRBP28702 MTATP6P15-201ENST00000527233 835 ntBASIC8.69□□□□□ -1.02
RXRBP28702 AC134349.2-201ENST00000535136 910 ntBASIC8.69□□□□□ -1.02
RXRBP28702 AC122688.2-201ENST00000543922 585 ntTSL 3 BASIC8.69□□□□□ -1.02
RXRBP28702 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC8.69□□□□□ -1.02
RXRBP28702 AC084759.1-201ENST00000561168 290 ntBASIC8.69□□□□□ -1.02
RXRBP28702 AL512428.1-201ENST00000562221 654 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
RXRBP28702 AC040162.2-201ENST00000573092 157 ntBASIC8.69□□□□□ -1.02
RXRBP28702 AC008088.1-201ENST00000580993 280 ntBASIC8.69□□□□□ -1.02
RXRBP28702 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC8.69□□□□□ -1.02
RXRBP28702 NIFKP6-201ENST00000598115 845 ntBASIC8.69□□□□□ -1.02
RXRBP28702 AC069304.3-201ENST00000603938 1084 ntBASIC8.69□□□□□ -1.02
RXRBP28702 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC8.69□□□□□ -1.02
RXRBP28702 LINC00559-201ENST00000569476 3867 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
RXRBP28702 CAST-234ENST00000511049 3273 ntAPPRIS ALT2 TSL 5 BASIC8.69□□□□□ -1.02
RXRBP28702 NBR1-201ENST00000341165 4656 ntAPPRIS P3 TSL 1 (best) BASIC8.69□□□□□ -1.02
RXRBP28702 ZNF317-201ENST00000247956 4073 ntAPPRIS P3 TSL 1 (best) BASIC8.69□□□□□ -1.02
RXRBP28702 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC8.69□□□□□ -1.02
RXRBP28702 TMEM99-204ENST00000622451 2073 ntAPPRIS P2 TSL 2 BASIC8.69□□□□□ -1.02
RXRBP28702 KCNA2-205ENST00000633222 11877 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
RXRBP28702 LIMCH1-216ENST00000512820 5071 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
RXRBP28702 SLC37A3-202ENST00000340308 2955 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
RXRBP28702 LNPEP-201ENST00000231368 12752 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
RXRBP28702 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
RXRBP28702 MAP4K4-212ENST00000456652 3855 ntTSL 5 BASIC8.69□□□□□ -1.02
RXRBP28702 IL31RA-203ENST00000359040 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
RXRBP28702 MED6-212ENST00000615788 1700 ntTSL 5 BASIC8.68□□□□□ -1.02
RXRBP28702 GCNT2-202ENST00000316170 4381 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
RXRBP28702 ZNF827-203ENST00000508784 7463 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
RXRBP28702 BDNF-206ENST00000395983 3776 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
RXRBP28702 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC8.68□□□□□ -1.02
RXRBP28702 NEDD1-201ENST00000266742 4046 ntAPPRIS P1 TSL 2 BASIC8.68□□□□□ -1.02
RXRBP28702 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
RXRBP28702 PLXDC2-203ENST00000377252 12468 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
RXRBP28702 SVIL-202ENST00000375398 8201 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
RXRBP28702 PSMD5-AS1-213ENST00000640327 3531 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
RXRBP28702 ITPK1-AS1-201ENST00000553639 4701 ntBASIC8.68□□□□□ -1.02
RXRBP28702 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
RXRBP28702 USP9YP21-201ENST00000420603 432 ntBASIC8.68□□□□□ -1.02
RXRBP28702 VDAC1P2-201ENST00000423609 850 ntBASIC8.68□□□□□ -1.02
RXRBP28702 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC8.68□□□□□ -1.02
RXRBP28702 BX119904.4-201ENST00000424402 301 ntBASIC8.68□□□□□ -1.02
RXRBP28702 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC8.68□□□□□ -1.02
RXRBP28702 MTCO2P23-201ENST00000425216 680 ntBASIC8.68□□□□□ -1.02
RXRBP28702 TXNL1P1-201ENST00000429528 554 ntBASIC8.68□□□□□ -1.02
RXRBP28702 VDAC1P6-201ENST00000430062 855 ntBASIC8.68□□□□□ -1.02
RXRBP28702 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
RXRBP28702 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC8.68□□□□□ -1.02
RXRBP28702 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC8.68□□□□□ -1.02
RXRBP28702 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC8.68□□□□□ -1.02
RXRBP28702 AL450996.1-201ENST00000445574 1202 ntBASIC8.68□□□□□ -1.02
RXRBP28702 AC009963.4-201ENST00000448535 339 ntBASIC8.68□□□□□ -1.02
RXRBP28702 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC8.68□□□□□ -1.02
RXRBP28702 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC8.68□□□□□ -1.02
RXRBP28702 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC8.68□□□□□ -1.02
RXRBP28702 AC108161.1-201ENST00000461060 402 ntBASIC8.68□□□□□ -1.02
RXRBP28702 AC026254.2-201ENST00000475295 371 ntBASIC8.68□□□□□ -1.02
RXRBP28702 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC8.68□□□□□ -1.02
RXRBP28702 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC8.68□□□□□ -1.02
RXRBP28702 AC027026.1-201ENST00000532323 742 ntBASIC8.68□□□□□ -1.02
RXRBP28702 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC8.68□□□□□ -1.02
RXRBP28702 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC8.68□□□□□ -1.02
RXRBP28702 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC8.68□□□□□ -1.02
RXRBP28702 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC8.68□□□□□ -1.02
RXRBP28702 MIR3691-201ENST00000578066 90 ntBASIC8.68□□□□□ -1.02
RXRBP28702 CTSLP2-201ENST00000580501 394 ntBASIC8.68□□□□□ -1.02
RXRBP28702 AC068768.2-201ENST00000602352 343 ntBASIC8.68□□□□□ -1.02
RXRBP28702 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC8.68□□□□□ -1.02
RXRBP28702 IGKV2OR2-10-201ENST00000613976 311 ntBASIC8.68□□□□□ -1.02
RXRBP28702 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC8.68□□□□□ -1.02
RXRBP28702 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC8.68□□□□□ -1.02
RXRBP28702 AL078595.3-201ENST00000623815 1166 ntBASIC8.68□□□□□ -1.02
RXRBP28702 AC004808.1-201ENST00000627671 721 ntBASIC8.68□□□□□ -1.02
RXRBP28702 AC009234.1-201ENST00000634985 895 ntTSL 5 BASIC8.68□□□□□ -1.02
RXRBP28702 ENAH-204ENST00000366844 13168 ntAPPRIS P4 TSL 1 (best) BASIC8.68□□□□□ -1.02
RXRBP28702 MMACHC-201ENST00000401061 5296 ntAPPRIS P1 TSL 2 BASIC8.68□□□□□ -1.02
RXRBP28702 AL645568.2-201ENST00000432815 1337 ntBASIC8.68□□□□□ -1.02
RXRBP28702 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC8.68□□□□□ -1.02
RXRBP28702 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
RXRBP28702 C7-201ENST00000313164 4257 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
RXRBP28702 TSC22D1-212ENST00000611198 2877 ntTSL 2 BASIC8.68□□□□□ -1.02
RXRBP28702 AC006019.2-201ENST00000451116 3044 ntTSL 2 BASIC8.68□□□□□ -1.02
RXRBP28702 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
RXRBP28702 PRLR-208ENST00000509140 1610 ntTSL 5 BASIC8.68□□□□□ -1.02
RXRBP28702 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC8.68□□□□□ -1.02
RXRBP28702 CAST-222ENST00000508579 1758 ntTSL 2 BASIC8.68□□□□□ -1.02
RXRBP28702 ZNRD1ASP-211ENST00000376797 3270 ntTSL 2 BASIC8.67□□□□□ -1.02
RXRBP28702 CHURC1-208ENST00000607599 3615 ntTSL 2 BASIC8.67□□□□□ -1.02
RXRBP28702 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
RXRBP28702 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
RXRBP28702 ARHGEF9-234ENST00000637557 4775 ntTSL 5 BASIC8.67□□□□□ -1.02
RXRBP28702 MAP3K9-207ENST00000611979 10497 ntTSL 5 BASIC8.67□□□□□ -1.02
RXRBP28702 SLC22A9-201ENST00000279178 2343 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
RXRBP28702 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
RXRBP28702 GAPDHP24-201ENST00000328713 983 ntBASIC8.67□□□□□ -1.02
RXRBP28702 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
RXRBP28702 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
RXRBP28702 SNORA63.3-201ENST00000362682 132 ntBASIC8.67□□□□□ -1.02
RXRBP28702 RN7SKP103-201ENST00000363848 320 ntBASIC8.67□□□□□ -1.02
RXRBP28702 AIM2-202ENST00000368130 1529 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms