Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC8.23□□□□□ -1.09
ERCC3P19447 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC8.23□□□□□ -1.09
ERCC3P19447 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC8.23□□□□□ -1.09
ERCC3P19447 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC8.23□□□□□ -1.09
ERCC3P19447 MIR6780B-201ENST00000610307 79 ntBASIC8.23□□□□□ -1.09
ERCC3P19447 AC015819.1-201ENST00000613588 663 ntBASIC8.23□□□□□ -1.09
ERCC3P19447 AC022079.1-201ENST00000621546 602 ntBASIC8.23□□□□□ -1.09
ERCC3P19447 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC8.23□□□□□ -1.09
ERCC3P19447 LINC01173-201ENST00000629370 331 ntTSL 3 BASIC8.23□□□□□ -1.09
ERCC3P19447 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC8.23□□□□□ -1.09
ERCC3P19447 MBD5-221ENST00000637159 902 ntTSL 5 BASIC8.23□□□□□ -1.09
ERCC3P19447 LRRC31-201ENST00000264676 2355 ntAPPRIS ALT2 TSL 2 BASIC8.23□□□□□ -1.09
ERCC3P19447 AL590065.1-201ENST00000603371 4774 ntBASIC8.23□□□□□ -1.09
ERCC3P19447 AL356361.1-201ENST00000400943 1459 ntBASIC8.23□□□□□ -1.09
ERCC3P19447 LARS-212ENST00000510191 3737 ntTSL 2 BASIC8.23□□□□□ -1.09
ERCC3P19447 NXF2B-205ENST00000618881 3193 ntTSL 2 BASIC8.23□□□□□ -1.09
ERCC3P19447 AL450327.1-201ENST00000430931 2632 ntTSL 5 BASIC8.23□□□□□ -1.09
ERCC3P19447 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC8.23□□□□□ -1.09
ERCC3P19447 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
ERCC3P19447 AL355578.1-201ENST00000607405 1328 ntBASIC8.23□□□□□ -1.09
ERCC3P19447 AC004023.1-201ENST00000561473 1744 ntBASIC8.23□□□□□ -1.09
ERCC3P19447 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
ERCC3P19447 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
ERCC3P19447 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC8.22□□□□□ -1.09
ERCC3P19447 ZNF211-202ENST00000254182 1959 ntTSL 2 BASIC8.22□□□□□ -1.09
ERCC3P19447 MACROD2-203ENST00000402914 4425 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
ERCC3P19447 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
ERCC3P19447 GOSR2-221ENST00000638892 3808 ntTSL 5 BASIC8.22□□□□□ -1.09
ERCC3P19447 AKAP5-201ENST00000320636 2601 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
ERCC3P19447 CCDC150P1-201ENST00000537123 2215 ntBASIC8.22□□□□□ -1.09
ERCC3P19447 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
ERCC3P19447 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC8.22□□□□□ -1.09
ERCC3P19447 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
ERCC3P19447 AL132640.2-201ENST00000559968 1698 ntBASIC8.22□□□□□ -1.09
ERCC3P19447 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
ERCC3P19447 HIPK1-201ENST00000340480 6997 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
ERCC3P19447 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
ERCC3P19447 AL672167.2-201ENST00000377164 879 ntBASIC8.22□□□□□ -1.09
ERCC3P19447 MIR142-201ENST00000384835 87 ntBASIC8.22□□□□□ -1.09
ERCC3P19447 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
ERCC3P19447 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC8.22□□□□□ -1.09
ERCC3P19447 RPL7P27-201ENST00000403775 720 ntBASIC8.22□□□□□ -1.09
ERCC3P19447 MIR1266-201ENST00000408125 84 ntBASIC8.22□□□□□ -1.09
ERCC3P19447 BRD8-204ENST00000411594 2967 ntTSL 5 BASIC8.22□□□□□ -1.09
ERCC3P19447 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC8.22□□□□□ -1.09
ERCC3P19447 AC096632.2-201ENST00000438139 1239 ntBASIC8.22□□□□□ -1.09
ERCC3P19447 PA2G4P6-201ENST00000438325 1197 ntBASIC8.22□□□□□ -1.09
ERCC3P19447 MTCYBP12-201ENST00000440559 1134 ntBASIC8.22□□□□□ -1.09
ERCC3P19447 AC092473.1-201ENST00000441098 221 ntBASIC8.22□□□□□ -1.09
ERCC3P19447 AC234771.4-201ENST00000441416 730 ntBASIC8.22□□□□□ -1.09
ERCC3P19447 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC8.22□□□□□ -1.09
ERCC3P19447 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC8.22□□□□□ -1.09
ERCC3P19447 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
ERCC3P19447 AC044810.1-201ENST00000480271 711 ntBASIC8.22□□□□□ -1.09
ERCC3P19447 AC009567.2-201ENST00000502989 349 ntBASIC8.22□□□□□ -1.09
ERCC3P19447 AC008967.1-201ENST00000504843 163 ntBASIC8.22□□□□□ -1.09
ERCC3P19447 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC8.22□□□□□ -1.09
ERCC3P19447 BTG4P1-201ENST00000510421 183 ntBASIC8.22□□□□□ -1.09
ERCC3P19447 LINC02055-203ENST00000520068 712 ntTSL 2 BASIC8.22□□□□□ -1.09
ERCC3P19447 PTPRJ-AS1-201ENST00000533964 301 ntTSL 5 BASIC8.22□□□□□ -1.09
ERCC3P19447 AC019209.3-201ENST00000536949 772 ntTSL 3 BASIC8.22□□□□□ -1.09
ERCC3P19447 MRPS36P5-201ENST00000551909 298 ntBASIC8.22□□□□□ -1.09
ERCC3P19447 OR4U1P-201ENST00000554958 912 ntBASIC8.22□□□□□ -1.09
ERCC3P19447 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC8.22□□□□□ -1.09
ERCC3P19447 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC8.22□□□□□ -1.09
ERCC3P19447 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
ERCC3P19447 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC8.22□□□□□ -1.09
ERCC3P19447 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC8.22□□□□□ -1.09
ERCC3P19447 AC005393.1-201ENST00000617916 584 ntBASIC8.22□□□□□ -1.09
ERCC3P19447 AP002791.1-201ENST00000623291 381 ntBASIC8.22□□□□□ -1.09
ERCC3P19447 AC140479.4-205ENST00000636339 820 ntBASIC8.22□□□□□ -1.09
ERCC3P19447 FBXW10-201ENST00000301938 3221 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
ERCC3P19447 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC8.22□□□□□ -1.09
ERCC3P19447 CYP2C18-201ENST00000285979 2418 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
ERCC3P19447 SLC11A2-201ENST00000262051 3986 ntAPPRIS ALT1 TSL 1 (best) BASIC8.22□□□□□ -1.09
ERCC3P19447 GTF2H3-212ENST00000543341 3329 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
ERCC3P19447 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
ERCC3P19447 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC8.22□□□□□ -1.09
ERCC3P19447 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
ERCC3P19447 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
ERCC3P19447 MRE11-201ENST00000323929 6897 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
ERCC3P19447 NDRG3-203ENST00000373773 2098 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
ERCC3P19447 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
ERCC3P19447 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.09
ERCC3P19447 AC007012.2-201ENST00000623206 1676 ntBASIC8.21□□□□□ -1.09
ERCC3P19447 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
ERCC3P19447 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC8.21□□□□□ -1.09
ERCC3P19447 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC8.21□□□□□ -1.09
ERCC3P19447 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
ERCC3P19447 MTCO1P15-201ENST00000529569 1526 ntBASIC8.21□□□□□ -1.1
ERCC3P19447 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
ERCC3P19447 RN7SKP174-201ENST00000363803 330 ntBASIC8.21□□□□□ -1.1
ERCC3P19447 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC8.21□□□□□ -1.1
ERCC3P19447 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
ERCC3P19447 MIR191-201ENST00000384873 92 ntBASIC8.21□□□□□ -1.1
ERCC3P19447 TRBV25-1-202ENST00000390398 381 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
ERCC3P19447 ATP5HP3-201ENST00000396994 486 ntBASIC8.21□□□□□ -1.1
ERCC3P19447 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
ERCC3P19447 RN7SKP97-201ENST00000410966 333 ntBASIC8.21□□□□□ -1.1
ERCC3P19447 EIF4A1P1-201ENST00000420241 934 ntBASIC8.21□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms