Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
LIG1P18858 RNU6-906P-201ENST00000384700 70 ntBASIC8.05□□□□□ -1.12
LIG1P18858 SNORD116-4-201ENST00000384733 96 ntBASIC8.05□□□□□ -1.12
LIG1P18858 IGBP1-AS2-201ENST00000403371 513 ntTSL 3 BASIC8.05□□□□□ -1.12
LIG1P18858 MIR1302-8-201ENST00000408342 128 ntBASIC8.05□□□□□ -1.12
LIG1P18858 RNU4ATAC2P-201ENST00000408674 126 ntBASIC8.05□□□□□ -1.12
LIG1P18858 LIPT1P1-201ENST00000415870 1186 ntBASIC8.05□□□□□ -1.12
LIG1P18858 PRELID3BP10-201ENST00000431957 584 ntBASIC8.05□□□□□ -1.12
LIG1P18858 RPL14P5-201ENST00000436474 730 ntBASIC8.05□□□□□ -1.12
LIG1P18858 AC093799.1-201ENST00000452411 499 ntBASIC8.05□□□□□ -1.12
LIG1P18858 NAP1L1P3-201ENST00000462291 880 ntBASIC8.05□□□□□ -1.12
LIG1P18858 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
LIG1P18858 PPM1AP1-201ENST00000502740 1135 ntBASIC8.05□□□□□ -1.12
LIG1P18858 LAMTOR3P2-201ENST00000504479 232 ntBASIC8.05□□□□□ -1.12
LIG1P18858 CHCHD2P7-201ENST00000508008 452 ntBASIC8.05□□□□□ -1.12
LIG1P18858 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
LIG1P18858 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC8.05□□□□□ -1.12
LIG1P18858 RNU6-276P-201ENST00000516114 96 ntBASIC8.05□□□□□ -1.12
LIG1P18858 MRPS36P3-201ENST00000519284 130 ntBASIC8.05□□□□□ -1.12
LIG1P18858 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC8.05□□□□□ -1.12
LIG1P18858 OR7E154P-201ENST00000525174 932 ntBASIC8.05□□□□□ -1.12
LIG1P18858 AP002336.1-201ENST00000531426 422 ntTSL 2 BASIC8.05□□□□□ -1.12
LIG1P18858 PCED1B-AS1-207ENST00000551432 522 ntTSL 5 BASIC8.05□□□□□ -1.12
LIG1P18858 AC022898.1-202ENST00000560864 806 ntTSL 2 BASIC8.05□□□□□ -1.12
LIG1P18858 AC068152.1-203ENST00000570314 254 ntTSL 3 BASIC8.05□□□□□ -1.12
LIG1P18858 AP001496.3-201ENST00000580230 913 ntBASIC8.05□□□□□ -1.12
LIG1P18858 RN7SL667P-201ENST00000582817 298 ntBASIC8.05□□□□□ -1.12
LIG1P18858 AC061975.3-201ENST00000583209 244 ntBASIC8.05□□□□□ -1.12
LIG1P18858 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC8.05□□□□□ -1.12
LIG1P18858 EFCAB8-204ENST00000618684 435 ntTSL 5 BASIC8.05□□□□□ -1.12
LIG1P18858 AC105105.5-201ENST00000622635 1294 ntBASIC8.05□□□□□ -1.12
LIG1P18858 AC211433.3-201ENST00000623770 375 ntBASIC8.05□□□□□ -1.12
LIG1P18858 METTL8-218ENST00000638989 876 ntTSL 5 BASIC8.05□□□□□ -1.12
LIG1P18858 METTL8-219ENST00000640734 726 ntTSL 2 BASIC8.05□□□□□ -1.12
LIG1P18858 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC8.05□□□□□ -1.12
LIG1P18858 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
LIG1P18858 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC8.05□□□□□ -1.12
LIG1P18858 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
LIG1P18858 AC009501.3-201ENST00000605001 1352 ntBASIC8.05□□□□□ -1.12
LIG1P18858 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
LIG1P18858 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC8.05□□□□□ -1.12
LIG1P18858 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC8.05□□□□□ -1.12
LIG1P18858 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC8.05□□□□□ -1.12
LIG1P18858 LRMP-204ENST00000547044 2208 ntAPPRIS P2 TSL 1 (best) BASIC8.05□□□□□ -1.12
LIG1P18858 MACROD2-203ENST00000402914 4425 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
LIG1P18858 ADH4-212ENST00000629236 1974 ntTSL 5 BASIC8.04□□□□□ -1.12
LIG1P18858 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC8.04□□□□□ -1.12
LIG1P18858 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
LIG1P18858 AC079248.1-201ENST00000427568 1546 ntBASIC8.04□□□□□ -1.12
LIG1P18858 FAM111B-201ENST00000343597 3488 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
LIG1P18858 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC8.04□□□□□ -1.12
LIG1P18858 AC013562.1-201ENST00000519427 1722 ntTSL 2 BASIC8.04□□□□□ -1.12
LIG1P18858 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
LIG1P18858 DDX42-203ENST00000457800 3323 ntTSL 5 BASIC8.04□□□□□ -1.12
LIG1P18858 TTR-201ENST00000237014 957 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
LIG1P18858 IGFL2-201ENST00000377693 607 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
LIG1P18858 SERPINB12-202ENST00000382768 1278 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
LIG1P18858 MIR513B-201ENST00000385136 84 ntBASIC8.04□□□□□ -1.12
LIG1P18858 IGLV5-52-201ENST00000390289 379 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
LIG1P18858 AL355615.1-201ENST00000406187 641 ntBASIC8.04□□□□□ -1.12
LIG1P18858 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC8.04□□□□□ -1.12
LIG1P18858 RPL36P18-201ENST00000419316 318 ntBASIC8.04□□□□□ -1.12
LIG1P18858 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
LIG1P18858 AL606495.1-201ENST00000422100 813 ntBASIC8.04□□□□□ -1.12
LIG1P18858 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC8.04□□□□□ -1.12
LIG1P18858 FECHP1-201ENST00000431896 1214 ntBASIC8.04□□□□□ -1.12
LIG1P18858 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC8.04□□□□□ -1.12
LIG1P18858 AL355483.3-201ENST00000446686 752 ntTSL 3 BASIC8.04□□□□□ -1.12
LIG1P18858 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC8.04□□□□□ -1.12
LIG1P18858 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC8.04□□□□□ -1.12
LIG1P18858 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
LIG1P18858 AL928654.1-201ENST00000476081 354 ntBASIC8.04□□□□□ -1.12
LIG1P18858 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC8.04□□□□□ -1.12
LIG1P18858 OR10J9P-201ENST00000511932 987 ntBASIC8.04□□□□□ -1.12
LIG1P18858 AC011352.1-201ENST00000512300 793 ntBASIC8.04□□□□□ -1.12
LIG1P18858 VPS37A-208ENST00000521005 479 ntTSL 3 BASIC8.04□□□□□ -1.12
LIG1P18858 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC8.04□□□□□ -1.12
LIG1P18858 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC8.04□□□□□ -1.12
LIG1P18858 AP000873.2-209ENST00000528083 547 ntTSL 4 BASIC8.04□□□□□ -1.12
LIG1P18858 OR4A42P-201ENST00000531397 938 ntBASIC8.04□□□□□ -1.12
LIG1P18858 ZNF321P-202ENST00000550843 495 ntBASIC8.04□□□□□ -1.12
LIG1P18858 C14orf2-209ENST00000554880 707 ntAPPRIS P1 TSL 3 BASIC8.04□□□□□ -1.12
LIG1P18858 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC8.04□□□□□ -1.12
LIG1P18858 AC099314.1-201ENST00000563916 562 ntTSL 4 BASIC8.04□□□□□ -1.12
LIG1P18858 THSD4-AS1-204ENST00000566268 468 ntTSL 4 BASIC8.04□□□□□ -1.12
LIG1P18858 AC006441.4-202ENST00000577621 510 ntTSL 3 BASIC8.04□□□□□ -1.12
LIG1P18858 AC025588.2-201ENST00000604851 466 ntBASIC8.04□□□□□ -1.12
LIG1P18858 AC026741.1-201ENST00000605892 482 ntBASIC8.04□□□□□ -1.12
LIG1P18858 AP005328.2-201ENST00000606879 657 ntTSL 3 BASIC8.04□□□□□ -1.12
LIG1P18858 AC135507.1-201ENST00000607214 561 ntBASIC8.04□□□□□ -1.12
LIG1P18858 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC8.04□□□□□ -1.12
LIG1P18858 HULC.1-201ENST00000612720 240 ntBASIC8.04□□□□□ -1.12
LIG1P18858 AC005899.7-201ENST00000618199 588 ntBASIC8.04□□□□□ -1.12
LIG1P18858 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC8.04□□□□□ -1.12
LIG1P18858 BX649567.1-201ENST00000642071 1134 ntBASIC8.04□□□□□ -1.12
LIG1P18858 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
LIG1P18858 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC8.04□□□□□ -1.12
LIG1P18858 FDFT1-208ENST00000525777 1472 ntTSL 2 BASIC8.04□□□□□ -1.12
LIG1P18858 PYHIN1-204ENST00000392252 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
LIG1P18858 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms