Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 CREM-242ENST00000490511 469 ntTSL 2 BASIC6.89□□□□□ -1.31
COL6A2P12110 TPT1P3-201ENST00000492841 512 ntBASIC6.89□□□□□ -1.31
COL6A2P12110 GAPDHP38-201ENST00000503632 1002 ntBASIC6.89□□□□□ -1.31
COL6A2P12110 AC021220.1-201ENST00000507445 630 ntBASIC6.89□□□□□ -1.31
COL6A2P12110 AC016559.1-201ENST00000511420 199 ntBASIC6.89□□□□□ -1.31
COL6A2P12110 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC6.89□□□□□ -1.31
COL6A2P12110 Y_RNA.688-201ENST00000516565 95 ntBASIC6.89□□□□□ -1.31
COL6A2P12110 AC073581.1-201ENST00000519036 575 ntBASIC6.89□□□□□ -1.31
COL6A2P12110 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC6.89□□□□□ -1.31
COL6A2P12110 AC008147.3-201ENST00000548666 354 ntBASIC6.89□□□□□ -1.31
COL6A2P12110 PCAT29-202ENST00000558941 545 ntTSL 4 BASIC6.89□□□□□ -1.31
COL6A2P12110 AC104229.1-201ENST00000561364 255 ntBASIC6.89□□□□□ -1.31
COL6A2P12110 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC6.89□□□□□ -1.31
COL6A2P12110 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC6.89□□□□□ -1.31
COL6A2P12110 BOLA2P1-201ENST00000584794 232 ntBASIC6.89□□□□□ -1.31
COL6A2P12110 AP001120.4-201ENST00000590231 108 ntBASIC6.89□□□□□ -1.31
COL6A2P12110 AC005154.6-201ENST00000598361 687 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
COL6A2P12110 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC6.89□□□□□ -1.31
COL6A2P12110 IZUMO3-203ENST00000604921 743 ntAPPRIS P2 TSL 5 BASIC6.89□□□□□ -1.31
COL6A2P12110 AC113361.1-201ENST00000606683 543 ntBASIC6.89□□□□□ -1.31
COL6A2P12110 FAM13A-AS1_2.1-201ENST00000611121 108 ntBASIC6.89□□□□□ -1.31
COL6A2P12110 AL445647.2-201ENST00000615170 130 ntBASIC6.89□□□□□ -1.31
COL6A2P12110 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC6.89□□□□□ -1.31
COL6A2P12110 OR1N1-202ENST00000619659 939 ntBASIC6.89□□□□□ -1.31
COL6A2P12110 AC004943.3-201ENST00000624116 600 ntBASIC6.89□□□□□ -1.31
COL6A2P12110 NPLOC4-221ENST00000625705 405 ntTSL 5 BASIC6.89□□□□□ -1.31
COL6A2P12110 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC6.89□□□□□ -1.31
COL6A2P12110 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC6.89□□□□□ -1.31
COL6A2P12110 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC6.89□□□□□ -1.31
COL6A2P12110 DEPDC1B-201ENST00000265036 2499 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
COL6A2P12110 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
COL6A2P12110 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
COL6A2P12110 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC6.89□□□□□ -1.31
COL6A2P12110 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
COL6A2P12110 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
COL6A2P12110 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
COL6A2P12110 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
COL6A2P12110 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC6.89□□□□□ -1.31
COL6A2P12110 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
COL6A2P12110 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
COL6A2P12110 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
COL6A2P12110 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
COL6A2P12110 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
COL6A2P12110 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
COL6A2P12110 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
COL6A2P12110 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
COL6A2P12110 FHL5-203ENST00000541107 1904 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
COL6A2P12110 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
COL6A2P12110 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
COL6A2P12110 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC6.88□□□□□ -1.31
COL6A2P12110 SLC2A3P2-201ENST00000331747 1480 ntBASIC6.88□□□□□ -1.31
COL6A2P12110 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.88□□□□□ -1.31
COL6A2P12110 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.88□□□□□ -1.31
COL6A2P12110 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC6.88□□□□□ -1.31
COL6A2P12110 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
COL6A2P12110 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC6.88□□□□□ -1.31
COL6A2P12110 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
COL6A2P12110 NEK2P4-201ENST00000425793 1329 ntBASIC6.88□□□□□ -1.31
COL6A2P12110 AL512310.3-201ENST00000547023 1335 ntBASIC6.88□□□□□ -1.31
COL6A2P12110 NDUFB4-201ENST00000184266 671 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
COL6A2P12110 OR2G6-201ENST00000343414 1049 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
COL6A2P12110 ARL4A-201ENST00000356797 1147 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
COL6A2P12110 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
COL6A2P12110 RN7SKP47-201ENST00000365347 328 ntBASIC6.88□□□□□ -1.31
COL6A2P12110 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC6.88□□□□□ -1.31
COL6A2P12110 SNORD116-8-201ENST00000384365 95 ntBASIC6.88□□□□□ -1.31
COL6A2P12110 CASP3-203ENST00000393588 677 ntTSL 4 BASIC6.88□□□□□ -1.31
COL6A2P12110 A2ML1-AS2-201ENST00000394240 386 ntTSL 5 BASIC6.88□□□□□ -1.31
COL6A2P12110 LIPT1P1-201ENST00000415870 1186 ntBASIC6.88□□□□□ -1.31
COL6A2P12110 RPS24P7-201ENST00000416921 246 ntBASIC6.88□□□□□ -1.31
COL6A2P12110 AC016716.2-201ENST00000418621 486 ntTSL 3 BASIC6.88□□□□□ -1.31
COL6A2P12110 MORF4L1P6-201ENST00000418771 268 ntBASIC6.88□□□□□ -1.31
COL6A2P12110 AC015987.1-201ENST00000419211 804 ntTSL 2 BASIC6.88□□□□□ -1.31
COL6A2P12110 SLC4A1APP1-201ENST00000419995 602 ntBASIC6.88□□□□□ -1.31
COL6A2P12110 EIF4A1P2-201ENST00000422633 1220 ntBASIC6.88□□□□□ -1.31
COL6A2P12110 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC6.88□□□□□ -1.31
COL6A2P12110 AC010099.3-201ENST00000423896 409 ntBASIC6.88□□□□□ -1.31
COL6A2P12110 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC6.88□□□□□ -1.31
COL6A2P12110 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC6.88□□□□□ -1.31
COL6A2P12110 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC6.88□□□□□ -1.31
COL6A2P12110 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC6.88□□□□□ -1.31
COL6A2P12110 RPL21P33-201ENST00000444831 484 ntBASIC6.88□□□□□ -1.31
COL6A2P12110 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC6.88□□□□□ -1.31
COL6A2P12110 FREM2-AS1-201ENST00000448887 465 ntTSL 2 BASIC6.88□□□□□ -1.31
COL6A2P12110 AC063955.1-201ENST00000462872 685 ntBASIC6.88□□□□□ -1.31
COL6A2P12110 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC6.88□□□□□ -1.31
COL6A2P12110 AC068522.1-201ENST00000482895 345 ntBASIC6.88□□□□□ -1.31
COL6A2P12110 AC116562.1-201ENST00000485355 781 ntBASIC6.88□□□□□ -1.31
COL6A2P12110 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
COL6A2P12110 RN7SL314P-201ENST00000490735 292 ntBASIC6.88□□□□□ -1.31
COL6A2P12110 LINC01184-206ENST00000508878 968 ntTSL 5 BASIC6.88□□□□□ -1.31
COL6A2P12110 AC008906.1-201ENST00000512856 993 ntTSL 5 BASIC6.88□□□□□ -1.31
COL6A2P12110 EIF3KP1-201ENST00000513279 656 ntBASIC6.88□□□□□ -1.31
COL6A2P12110 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC6.88□□□□□ -1.31
COL6A2P12110 AC022639.1-204ENST00000520365 569 ntTSL 4 BASIC6.88□□□□□ -1.31
COL6A2P12110 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC6.88□□□□□ -1.31
COL6A2P12110 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC6.88□□□□□ -1.31
COL6A2P12110 OR10V3P-201ENST00000525712 725 ntBASIC6.88□□□□□ -1.31
COL6A2P12110 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC6.88□□□□□ -1.31
COL6A2P12110 GLYATL1P4-201ENST00000529326 906 ntBASIC6.88□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 125.5 ms