Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC4.76□□□□□ -1.65
CXCL1P09341 BX005040.2-201ENST00000620504 370 ntBASIC4.76□□□□□ -1.65
CXCL1P09341 AC005618.4-201ENST00000625053 554 ntBASIC4.76□□□□□ -1.65
CXCL1P09341 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CXCL1P09341 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CXCL1P09341 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC4.76□□□□□ -1.65
CXCL1P09341 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CXCL1P09341 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CXCL1P09341 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CXCL1P09341 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CXCL1P09341 RPS6KA6-201ENST00000262752 2547 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CXCL1P09341 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC4.76□□□□□ -1.65
CXCL1P09341 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CXCL1P09341 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC4.76□□□□□ -1.65
CXCL1P09341 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CXCL1P09341 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
CXCL1P09341 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
CXCL1P09341 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
CXCL1P09341 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CXCL1P09341 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC4.75□□□□□ -1.65
CXCL1P09341 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CXCL1P09341 AC005224.3-201ENST00000584683 2140 ntBASIC4.75□□□□□ -1.65
CXCL1P09341 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
CXCL1P09341 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CXCL1P09341 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
CXCL1P09341 OR51M1-201ENST00000328611 1058 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
CXCL1P09341 HYPM-201ENST00000341016 501 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
CXCL1P09341 RNA5SP321-201ENST00000362722 111 ntBASIC4.75□□□□□ -1.65
CXCL1P09341 RN7SKP189-201ENST00000365042 330 ntBASIC4.75□□□□□ -1.65
CXCL1P09341 S100A7-201ENST00000368722 442 ntAPPRIS P1 TSL 3 BASIC4.75□□□□□ -1.65
CXCL1P09341 NOX1-203ENST00000372964 661 ntTSL 2 BASIC4.75□□□□□ -1.65
CXCL1P09341 IGFL2-201ENST00000377693 607 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
CXCL1P09341 NPM1P31-201ENST00000399021 764 ntBASIC4.75□□□□□ -1.65
CXCL1P09341 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
CXCL1P09341 RNA5SP431-201ENST00000410312 120 ntBASIC4.75□□□□□ -1.65
CXCL1P09341 LINC01505-201ENST00000411451 686 ntTSL 3 BASIC4.75□□□□□ -1.65
CXCL1P09341 AL139184.1-202ENST00000422303 222 ntBASIC4.75□□□□□ -1.65
CXCL1P09341 TEX41-206ENST00000432608 661 ntTSL 3 BASIC4.75□□□□□ -1.65
CXCL1P09341 AC007790.1-201ENST00000439081 782 ntBASIC4.75□□□□□ -1.65
CXCL1P09341 RPS10P18-201ENST00000442662 495 ntBASIC4.75□□□□□ -1.65
CXCL1P09341 AC092106.1-201ENST00000444291 373 ntBASIC4.75□□□□□ -1.65
CXCL1P09341 KRTAP2-5P-201ENST00000446109 396 ntBASIC4.75□□□□□ -1.65
CXCL1P09341 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC4.75□□□□□ -1.65
CXCL1P09341 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC4.75□□□□□ -1.65
CXCL1P09341 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC4.75□□□□□ -1.65
CXCL1P09341 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC4.75□□□□□ -1.65
CXCL1P09341 AP001646.2-201ENST00000528645 1156 ntBASIC4.75□□□□□ -1.65
CXCL1P09341 LINC00678-202ENST00000534757 798 ntTSL 3 BASIC4.75□□□□□ -1.65
CXCL1P09341 AC013356.3-201ENST00000558601 584 ntTSL 3 BASIC4.75□□□□□ -1.65
CXCL1P09341 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC4.75□□□□□ -1.65
CXCL1P09341 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC4.75□□□□□ -1.65
CXCL1P09341 AP001122.1-201ENST00000572256 541 ntTSL 4 BASIC4.75□□□□□ -1.65
CXCL1P09341 AC091133.5-201ENST00000603088 301 ntBASIC4.75□□□□□ -1.65
CXCL1P09341 AC104117.5-201ENST00000606195 547 ntBASIC4.75□□□□□ -1.65
CXCL1P09341 GMDS-AS1-215ENST00000606884 580 ntTSL 2 BASIC4.75□□□□□ -1.65
CXCL1P09341 AC008833.1-201ENST00000611633 691 ntBASIC4.75□□□□□ -1.65
CXCL1P09341 AC007786.3-201ENST00000615154 596 ntBASIC4.75□□□□□ -1.65
CXCL1P09341 AC010320.5-201ENST00000619124 676 ntBASIC4.75□□□□□ -1.65
CXCL1P09341 AC022400.9-201ENST00000623633 273 ntBASIC4.75□□□□□ -1.65
CXCL1P09341 AC133485.6-201ENST00000624045 688 ntBASIC4.75□□□□□ -1.65
CXCL1P09341 AL035425.4-201ENST00000624509 1063 ntBASIC4.75□□□□□ -1.65
CXCL1P09341 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CXCL1P09341 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CXCL1P09341 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
CXCL1P09341 ATP10D-203ENST00000504445 2550 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CXCL1P09341 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CXCL1P09341 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC4.75□□□□□ -1.65
CXCL1P09341 AC092376.2-201ENST00000622621 4116 ntBASIC4.75□□□□□ -1.65
CXCL1P09341 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CXCL1P09341 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
CXCL1P09341 AC026523.2-201ENST00000625039 7739 ntBASIC4.75□□□□□ -1.65
CXCL1P09341 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CXCL1P09341 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CXCL1P09341 GALNT11-201ENST00000415421 2555 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CXCL1P09341 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC4.74□□□□□ -1.65
CXCL1P09341 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC4.74□□□□□ -1.65
CXCL1P09341 AL034546.1-201ENST00000623740 3693 ntBASIC4.74□□□□□ -1.65
CXCL1P09341 AL449283.1-201ENST00000602631 3403 ntBASIC4.74□□□□□ -1.65
CXCL1P09341 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CXCL1P09341 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
CXCL1P09341 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC4.74□□□□□ -1.65
CXCL1P09341 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC4.74□□□□□ -1.65
CXCL1P09341 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CXCL1P09341 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
CXCL1P09341 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC4.74□□□□□ -1.65
CXCL1P09341 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC4.74□□□□□ -1.65
CXCL1P09341 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
CXCL1P09341 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CXCL1P09341 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CXCL1P09341 HMGN2-201ENST00000361427 1191 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CXCL1P09341 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CXCL1P09341 RNU1-56P-201ENST00000391303 164 ntBASIC4.74□□□□□ -1.65
CXCL1P09341 OR2H1-204ENST00000396792 1294 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
CXCL1P09341 AL359694.1-201ENST00000403247 604 ntBASIC4.74□□□□□ -1.65
CXCL1P09341 RPL31-203ENST00000409028 1110 ntTSL 2 BASIC4.74□□□□□ -1.65
CXCL1P09341 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC4.74□□□□□ -1.65
CXCL1P09341 RN7SKP268-201ENST00000411107 316 ntBASIC4.74□□□□□ -1.65
CXCL1P09341 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC4.74□□□□□ -1.65
CXCL1P09341 NMD3P2-201ENST00000421815 761 ntBASIC4.74□□□□□ -1.65
CXCL1P09341 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms