Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AC010401.2-201ENST00000575137 4934 ntBASIC6.46□□□□□ -1.38
PDGFBP01127 FBXL13-201ENST00000313221 2744 ntTSL 2 BASIC6.46□□□□□ -1.38
PDGFBP01127 EIF2S3-201ENST00000253039 2858 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
PDGFBP01127 TLR10-202ENST00000361424 3484 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
PDGFBP01127 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
PDGFBP01127 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
PDGFBP01127 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC6.46□□□□□ -1.38
PDGFBP01127 RNA5SP65-201ENST00000363166 119 ntBASIC6.46□□□□□ -1.38
PDGFBP01127 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
PDGFBP01127 MIR143-201ENST00000385300 106 ntBASIC6.46□□□□□ -1.38
PDGFBP01127 ZSCAN12P1-201ENST00000406489 419 ntBASIC6.46□□□□□ -1.38
PDGFBP01127 AC245060.4-201ENST00000413293 1121 ntBASIC6.46□□□□□ -1.38
PDGFBP01127 OR2AT2P-201ENST00000413438 905 ntBASIC6.46□□□□□ -1.38
PDGFBP01127 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC6.46□□□□□ -1.38
PDGFBP01127 LINC01497-201ENST00000420427 665 ntTSL 3 BASIC6.46□□□□□ -1.38
PDGFBP01127 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
PDGFBP01127 LINC01918-202ENST00000438148 415 ntTSL 3 BASIC6.46□□□□□ -1.38
PDGFBP01127 AL445665.1-202ENST00000452436 324 ntBASIC6.46□□□□□ -1.38
PDGFBP01127 RN7SL860P-201ENST00000473738 223 ntBASIC6.46□□□□□ -1.38
PDGFBP01127 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC6.46□□□□□ -1.38
PDGFBP01127 OR5M14P-201ENST00000506803 618 ntBASIC6.46□□□□□ -1.38
PDGFBP01127 AC092593.2-201ENST00000513866 913 ntBASIC6.46□□□□□ -1.38
PDGFBP01127 CR383658.1-201ENST00000514609 734 ntBASIC6.46□□□□□ -1.38
PDGFBP01127 ZFP2-202ENST00000520301 2043 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
PDGFBP01127 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC6.46□□□□□ -1.38
PDGFBP01127 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC6.46□□□□□ -1.38
PDGFBP01127 DPPA3P2-201ENST00000553589 478 ntBASIC6.46□□□□□ -1.38
PDGFBP01127 GNG2-208ENST00000554875 430 ntTSL 5 BASIC6.46□□□□□ -1.38
PDGFBP01127 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC6.46□□□□□ -1.38
PDGFBP01127 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC6.46□□□□□ -1.38
PDGFBP01127 AC010463.3-201ENST00000594077 500 ntBASIC6.46□□□□□ -1.38
PDGFBP01127 AL589674.2-201ENST00000604304 337 ntBASIC6.46□□□□□ -1.38
PDGFBP01127 AF287957.1-201ENST00000607368 1595 ntBASIC6.46□□□□□ -1.38
PDGFBP01127 AL035661.1-201ENST00000620459 1144 ntBASIC6.46□□□□□ -1.38
PDGFBP01127 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC6.46□□□□□ -1.38
PDGFBP01127 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC6.46□□□□□ -1.38
PDGFBP01127 IL5RA-204ENST00000418488 5521 ntTSL 5 BASIC6.46□□□□□ -1.38
PDGFBP01127 AC020658.2-201ENST00000559030 4020 ntBASIC6.46□□□□□ -1.38
PDGFBP01127 SYNPO2-203ENST00000434046 3588 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
PDGFBP01127 CD163-209ENST00000541972 3590 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
PDGFBP01127 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC6.46□□□□□ -1.38
PDGFBP01127 MKKS-201ENST00000347364 6714 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
PDGFBP01127 AC109780.1-201ENST00000451768 1344 ntBASIC6.46□□□□□ -1.38
PDGFBP01127 NXT2-203ENST00000372106 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
PDGFBP01127 RSRC1-203ENST00000464171 2411 ntTSL 5 BASIC6.46□□□□□ -1.38
PDGFBP01127 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
PDGFBP01127 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC6.46□□□□□ -1.38
PDGFBP01127 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC6.46□□□□□ -1.38
PDGFBP01127 AL391262.1-201ENST00000556558 1992 ntBASIC6.46□□□□□ -1.38
PDGFBP01127 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
PDGFBP01127 GABPB2-201ENST00000368916 1680 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
PDGFBP01127 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC6.45□□□□□ -1.38
PDGFBP01127 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
PDGFBP01127 PPWD1-214ENST00000535264 2195 ntTSL 2 BASIC6.45□□□□□ -1.38
PDGFBP01127 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
PDGFBP01127 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
PDGFBP01127 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
PDGFBP01127 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC6.45□□□□□ -1.38
PDGFBP01127 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
PDGFBP01127 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
PDGFBP01127 AC106872.5-201ENST00000508856 1416 ntBASIC6.45□□□□□ -1.38
PDGFBP01127 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
PDGFBP01127 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
PDGFBP01127 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
PDGFBP01127 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC6.45□□□□□ -1.38
PDGFBP01127 SNORA21-201ENST00000362423 132 ntBASIC6.45□□□□□ -1.38
PDGFBP01127 RNU6-316P-201ENST00000391027 107 ntBASIC6.45□□□□□ -1.38
PDGFBP01127 RPS3AP2-201ENST00000407190 754 ntBASIC6.45□□□□□ -1.38
PDGFBP01127 AL354890.1-201ENST00000413730 346 ntBASIC6.45□□□□□ -1.38
PDGFBP01127 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
PDGFBP01127 NFIA-AS2-202ENST00000421455 768 ntTSL 4 BASIC6.45□□□□□ -1.38
PDGFBP01127 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC6.45□□□□□ -1.38
PDGFBP01127 HIGD1AP16-201ENST00000450986 258 ntBASIC6.45□□□□□ -1.38
PDGFBP01127 AC002553.3-201ENST00000453002 341 ntBASIC6.45□□□□□ -1.38
PDGFBP01127 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC6.45□□□□□ -1.38
PDGFBP01127 MTND6P8-201ENST00000503471 522 ntBASIC6.45□□□□□ -1.38
PDGFBP01127 IGHV4-55-201ENST00000520889 368 ntBASIC6.45□□□□□ -1.38
PDGFBP01127 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC6.45□□□□□ -1.38
PDGFBP01127 EIF4A2P5-201ENST00000529914 499 ntBASIC6.45□□□□□ -1.38
PDGFBP01127 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC6.45□□□□□ -1.38
PDGFBP01127 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
PDGFBP01127 AC093283.1-201ENST00000565306 1075 ntBASIC6.45□□□□□ -1.38
PDGFBP01127 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC6.45□□□□□ -1.38
PDGFBP01127 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC6.45□□□□□ -1.38
PDGFBP01127 AC005332.4-201ENST00000592752 579 ntBASIC6.45□□□□□ -1.38
PDGFBP01127 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC6.45□□□□□ -1.38
PDGFBP01127 AL356986.1-201ENST00000604085 341 ntBASIC6.45□□□□□ -1.38
PDGFBP01127 SUMO2P15-201ENST00000604285 278 ntBASIC6.45□□□□□ -1.38
PDGFBP01127 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC6.45□□□□□ -1.38
PDGFBP01127 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC6.45□□□□□ -1.38
PDGFBP01127 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC6.45□□□□□ -1.38
PDGFBP01127 SAGE3P-201ENST00000619800 1635 ntBASIC6.45□□□□□ -1.38
PDGFBP01127 CXCR6-204ENST00000458629 2805 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
PDGFBP01127 SPATA31B1P-201ENST00000434692 4016 ntBASIC6.45□□□□□ -1.38
PDGFBP01127 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
PDGFBP01127 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
PDGFBP01127 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.45□□□□□ -1.38
PDGFBP01127 TANK-205ENST00000405852 2155 ntTSL 5 BASIC6.45□□□□□ -1.38
PDGFBP01127 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC6.45□□□□□ -1.38
PDGFBP01127 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC6.45□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms