Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
SCN2BO60939 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
SCN2BO60939 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC5.94□□□□□ -1.46
SCN2BO60939 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SCN2BO60939 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SCN2BO60939 SNORA7A-201ENST00000384765 139 ntBASIC5.94□□□□□ -1.46
SCN2BO60939 AL445238.1-204ENST00000400311 463 ntBASIC5.94□□□□□ -1.46
SCN2BO60939 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC5.94□□□□□ -1.46
SCN2BO60939 RN7SKP221-201ENST00000410420 301 ntBASIC5.94□□□□□ -1.46
SCN2BO60939 AC015977.1-201ENST00000418887 292 ntBASIC5.94□□□□□ -1.46
SCN2BO60939 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SCN2BO60939 GAPDHP37-201ENST00000442317 968 ntBASIC5.94□□□□□ -1.46
SCN2BO60939 MORF4-201ENST00000447135 971 ntBASIC5.94□□□□□ -1.46
SCN2BO60939 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SCN2BO60939 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC5.94□□□□□ -1.46
SCN2BO60939 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
SCN2BO60939 UCK2-205ENST00000469256 753 ntTSL 3 BASIC5.94□□□□□ -1.46
SCN2BO60939 RPL5P33-201ENST00000487833 905 ntBASIC5.94□□□□□ -1.46
SCN2BO60939 MTCO1P55-201ENST00000489829 745 ntBASIC5.94□□□□□ -1.46
SCN2BO60939 AC122714.1-201ENST00000502510 459 ntBASIC5.94□□□□□ -1.46
SCN2BO60939 AC010343.2-201ENST00000510162 224 ntBASIC5.94□□□□□ -1.46
SCN2BO60939 AK6-204ENST00000512561 587 ntTSL 5 BASIC5.94□□□□□ -1.46
SCN2BO60939 RNA5SP96-201ENST00000516041 107 ntBASIC5.94□□□□□ -1.46
SCN2BO60939 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC5.94□□□□□ -1.46
SCN2BO60939 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
SCN2BO60939 CASP1P2-201ENST00000526830 1258 ntBASIC5.94□□□□□ -1.46
SCN2BO60939 OR6M2P-201ENST00000529831 871 ntBASIC5.94□□□□□ -1.46
SCN2BO60939 RPA2P3-201ENST00000533268 770 ntBASIC5.94□□□□□ -1.46
SCN2BO60939 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC5.94□□□□□ -1.46
SCN2BO60939 AL049870.3-201ENST00000555157 360 ntTSL 2 BASIC5.94□□□□□ -1.46
SCN2BO60939 AC023968.1-201ENST00000560719 475 ntBASIC5.94□□□□□ -1.46
SCN2BO60939 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SCN2BO60939 SYPL1P2-201ENST00000582878 727 ntBASIC5.94□□□□□ -1.46
SCN2BO60939 AC027334.1-201ENST00000603257 310 ntBASIC5.94□□□□□ -1.46
SCN2BO60939 MIR6070-201ENST00000613967 103 ntBASIC5.94□□□□□ -1.46
SCN2BO60939 AC003992.1-201ENST00000635364 557 ntBASIC5.94□□□□□ -1.46
SCN2BO60939 AC116667.2-201ENST00000641075 823 ntBASIC5.94□□□□□ -1.46
SCN2BO60939 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SCN2BO60939 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC5.94□□□□□ -1.46
SCN2BO60939 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC5.93□□□□□ -1.46
SCN2BO60939 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC5.93□□□□□ -1.46
SCN2BO60939 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SCN2BO60939 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.93□□□□□ -1.46
SCN2BO60939 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.93□□□□□ -1.46
SCN2BO60939 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
SCN2BO60939 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC5.93□□□□□ -1.46
SCN2BO60939 IMMTP1-201ENST00000435590 2219 ntBASIC5.93□□□□□ -1.46
SCN2BO60939 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
SCN2BO60939 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC5.93□□□□□ -1.46
SCN2BO60939 AL121835.1-201ENST00000404250 354 ntBASIC5.93□□□□□ -1.46
SCN2BO60939 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC5.93□□□□□ -1.46
SCN2BO60939 RN7SKP151-201ENST00000410230 316 ntBASIC5.93□□□□□ -1.46
SCN2BO60939 RPS26P38-201ENST00000414476 348 ntBASIC5.93□□□□□ -1.46
SCN2BO60939 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC5.93□□□□□ -1.46
SCN2BO60939 RPS7P14-201ENST00000426405 583 ntBASIC5.93□□□□□ -1.46
SCN2BO60939 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC5.93□□□□□ -1.46
SCN2BO60939 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SCN2BO60939 RN7SL643P-201ENST00000471845 291 ntBASIC5.93□□□□□ -1.46
SCN2BO60939 AL355032.1-201ENST00000472981 438 ntBASIC5.93□□□□□ -1.46
SCN2BO60939 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC5.93□□□□□ -1.46
SCN2BO60939 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC5.93□□□□□ -1.46
SCN2BO60939 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC5.93□□□□□ -1.46
SCN2BO60939 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SCN2BO60939 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC5.93□□□□□ -1.46
SCN2BO60939 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC5.93□□□□□ -1.46
SCN2BO60939 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
SCN2BO60939 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC5.93□□□□□ -1.46
SCN2BO60939 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC5.93□□□□□ -1.46
SCN2BO60939 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
SCN2BO60939 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC5.93□□□□□ -1.46
SCN2BO60939 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
SCN2BO60939 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC5.93□□□□□ -1.46
SCN2BO60939 AC139792.1-201ENST00000607051 647 ntBASIC5.93□□□□□ -1.46
SCN2BO60939 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC5.93□□□□□ -1.46
SCN2BO60939 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC5.93□□□□□ -1.46
SCN2BO60939 MIR7159-201ENST00000620587 66 ntBASIC5.93□□□□□ -1.46
SCN2BO60939 AC009120.7-201ENST00000623452 780 ntBASIC5.93□□□□□ -1.46
SCN2BO60939 TEX41-279ENST00000629149 609 ntTSL 5 BASIC5.93□□□□□ -1.46
SCN2BO60939 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
SCN2BO60939 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SCN2BO60939 AC120036.2-201ENST00000509729 1474 ntBASIC5.93□□□□□ -1.46
SCN2BO60939 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.93□□□□□ -1.46
SCN2BO60939 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC5.93□□□□□ -1.46
SCN2BO60939 AL121768.1-201ENST00000613917 2544 ntBASIC5.93□□□□□ -1.46
SCN2BO60939 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
SCN2BO60939 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SCN2BO60939 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SCN2BO60939 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC5.93□□□□□ -1.46
SCN2BO60939 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SCN2BO60939 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
SCN2BO60939 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SCN2BO60939 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SCN2BO60939 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.92□□□□□ -1.46
SCN2BO60939 SMG1P5-202ENST00000529428 4219 ntBASIC5.92□□□□□ -1.46
SCN2BO60939 SMG1P2-201ENST00000566127 4221 ntBASIC5.92□□□□□ -1.46
SCN2BO60939 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SCN2BO60939 ZNF101P1-201ENST00000435701 1720 ntBASIC5.92□□□□□ -1.46
SCN2BO60939 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
SCN2BO60939 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC5.92□□□□□ -1.46
SCN2BO60939 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms