Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RIPK2O43353 CBX1P3-201ENST00000413296 527 ntBASIC6.31□□□□□ -1.4
RIPK2O43353 MICG-208ENST00000416822 132 ntBASIC6.31□□□□□ -1.4
RIPK2O43353 OR52S1P-201ENST00000427016 937 ntBASIC6.31□□□□□ -1.4
RIPK2O43353 TRBV29OR9-2-201ENST00000427589 333 ntBASIC6.31□□□□□ -1.4
RIPK2O43353 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC6.31□□□□□ -1.4
RIPK2O43353 KRT8P51-201ENST00000438938 274 ntBASIC6.31□□□□□ -1.4
RIPK2O43353 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RIPK2O43353 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC6.31□□□□□ -1.4
RIPK2O43353 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC6.31□□□□□ -1.4
RIPK2O43353 AC093719.1-201ENST00000480427 441 ntBASIC6.31□□□□□ -1.4
RIPK2O43353 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC6.31□□□□□ -1.4
RIPK2O43353 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC6.31□□□□□ -1.4
RIPK2O43353 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC6.31□□□□□ -1.4
RIPK2O43353 LINC01262-201ENST00000513681 879 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RIPK2O43353 AL133399.1-201ENST00000527476 298 ntBASIC6.31□□□□□ -1.4
RIPK2O43353 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC6.31□□□□□ -1.4
RIPK2O43353 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC6.31□□□□□ -1.4
RIPK2O43353 LINC01146-206ENST00000556684 361 ntTSL 3 BASIC6.31□□□□□ -1.4
RIPK2O43353 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC6.31□□□□□ -1.4
RIPK2O43353 MIR7515HG-250ENST00000592565 856 ntTSL 5 BASIC6.31□□□□□ -1.4
RIPK2O43353 AC005332.4-201ENST00000592752 579 ntBASIC6.31□□□□□ -1.4
RIPK2O43353 AC005514.1-201ENST00000623521 208 ntBASIC6.31□□□□□ -1.4
RIPK2O43353 MAPK10-350ENST00000641777 965 ntBASIC6.31□□□□□ -1.4
RIPK2O43353 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
RIPK2O43353 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RIPK2O43353 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC6.31□□□□□ -1.4
RIPK2O43353 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.31□□□□□ -1.4
RIPK2O43353 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RIPK2O43353 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
RIPK2O43353 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RIPK2O43353 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC6.3□□□□□ -1.4
RIPK2O43353 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC6.3□□□□□ -1.4
RIPK2O43353 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RIPK2O43353 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC6.3□□□□□ -1.4
RIPK2O43353 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RIPK2O43353 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RIPK2O43353 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
RIPK2O43353 RNU6-233P-201ENST00000410845 141 ntBASIC6.3□□□□□ -1.4
RIPK2O43353 RN7SKP17-201ENST00000411242 351 ntBASIC6.3□□□□□ -1.4
RIPK2O43353 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC6.3□□□□□ -1.4
RIPK2O43353 AC073410.1-201ENST00000435125 589 ntBASIC6.3□□□□□ -1.4
RIPK2O43353 MORF4-201ENST00000447135 971 ntBASIC6.3□□□□□ -1.4
RIPK2O43353 AL133215.1-201ENST00000447344 342 ntTSL 3 BASIC6.3□□□□□ -1.4
RIPK2O43353 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RIPK2O43353 RPS3AP49-201ENST00000472161 790 ntBASIC6.3□□□□□ -1.4
RIPK2O43353 AF305872.1-201ENST00000485217 471 ntBASIC6.3□□□□□ -1.4
RIPK2O43353 RN7SL714P-201ENST00000487050 298 ntBASIC6.3□□□□□ -1.4
RIPK2O43353 AC010655.2-201ENST00000493710 662 ntTSL 3 BASIC6.3□□□□□ -1.4
RIPK2O43353 SUMO2P4-201ENST00000504193 276 ntBASIC6.3□□□□□ -1.4
RIPK2O43353 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC6.3□□□□□ -1.4
RIPK2O43353 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC6.3□□□□□ -1.4
RIPK2O43353 AC091096.2-201ENST00000523284 587 ntTSL 3 BASIC6.3□□□□□ -1.4
RIPK2O43353 RPL41P2-201ENST00000544920 409 ntBASIC6.3□□□□□ -1.4
RIPK2O43353 AC126323.4-201ENST00000566935 234 ntBASIC6.3□□□□□ -1.4
RIPK2O43353 RPS4XP21-201ENST00000603814 750 ntBASIC6.3□□□□□ -1.4
RIPK2O43353 AC245033.2-201ENST00000621893 421 ntTSL 3 BASIC6.3□□□□□ -1.4
RIPK2O43353 OR7A1P-202ENST00000641542 1158 ntBASIC6.3□□□□□ -1.4
RIPK2O43353 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC6.3□□□□□ -1.4
RIPK2O43353 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC6.3□□□□□ -1.4
RIPK2O43353 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
RIPK2O43353 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC6.3□□□□□ -1.4
RIPK2O43353 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC6.3□□□□□ -1.4
RIPK2O43353 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC6.3□□□□□ -1.4
RIPK2O43353 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RIPK2O43353 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.3□□□□□ -1.4
RIPK2O43353 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.3□□□□□ -1.4
RIPK2O43353 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RIPK2O43353 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
RIPK2O43353 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RIPK2O43353 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.3□□□□□ -1.4
RIPK2O43353 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC6.3□□□□□ -1.4
RIPK2O43353 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.3□□□□□ -1.4
RIPK2O43353 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
RIPK2O43353 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
RIPK2O43353 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC6.29□□□□□ -1.4
RIPK2O43353 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
RIPK2O43353 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.29□□□□□ -1.4
RIPK2O43353 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC6.29□□□□□ -1.4
RIPK2O43353 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
RIPK2O43353 OR7A2P-201ENST00000304105 930 ntBASIC6.29□□□□□ -1.4
RIPK2O43353 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC6.29□□□□□ -1.4
RIPK2O43353 SNORA43.1-201ENST00000364863 140 ntBASIC6.29□□□□□ -1.4
RIPK2O43353 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
RIPK2O43353 AL451061.1-201ENST00000407887 862 ntBASIC6.29□□□□□ -1.4
RIPK2O43353 MIR1231-201ENST00000408101 92 ntBASIC6.29□□□□□ -1.4
RIPK2O43353 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC6.29□□□□□ -1.4
RIPK2O43353 AC092106.2-201ENST00000436597 487 ntBASIC6.29□□□□□ -1.4
RIPK2O43353 AL161722.1-201ENST00000446972 1032 ntBASIC6.29□□□□□ -1.4
RIPK2O43353 RAB28P2-201ENST00000454299 641 ntBASIC6.29□□□□□ -1.4
RIPK2O43353 OSTCP1-201ENST00000455507 450 ntBASIC6.29□□□□□ -1.4
RIPK2O43353 AC093870.1-201ENST00000506837 213 ntBASIC6.29□□□□□ -1.4
RIPK2O43353 ENPP7P3-201ENST00000509123 241 ntBASIC6.29□□□□□ -1.4
RIPK2O43353 TOMM22P4-201ENST00000511318 336 ntBASIC6.29□□□□□ -1.4
RIPK2O43353 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
RIPK2O43353 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC6.29□□□□□ -1.4
RIPK2O43353 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC6.29□□□□□ -1.4
RIPK2O43353 AC044839.3-201ENST00000532068 860 ntTSL 3 BASIC6.29□□□□□ -1.4
RIPK2O43353 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC6.29□□□□□ -1.4
RIPK2O43353 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms