Protein–RNA interactions for Protein: A6NH52

TVP23A, Golgi apparatus membrane protein TVP23 homolog A, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23AA6NH52 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC5.59□□□□□ -1.51
TVP23AA6NH52 AC116667.2-201ENST00000641075 823 ntBASIC5.59□□□□□ -1.51
TVP23AA6NH52 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
TVP23AA6NH52 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC5.59□□□□□ -1.51
TVP23AA6NH52 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
TVP23AA6NH52 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.52
TVP23AA6NH52 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
TVP23AA6NH52 AC093297.3-201ENST00000607056 2517 ntBASIC5.58□□□□□ -1.52
TVP23AA6NH52 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TVP23AA6NH52 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
TVP23AA6NH52 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TVP23AA6NH52 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
TVP23AA6NH52 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
TVP23AA6NH52 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
TVP23AA6NH52 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.58□□□□□ -1.52
TVP23AA6NH52 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TVP23AA6NH52 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
TVP23AA6NH52 DYDC2-201ENST00000256039 1842 ntAPPRIS P3 TSL 2 BASIC5.58□□□□□ -1.52
TVP23AA6NH52 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TVP23AA6NH52 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TVP23AA6NH52 AL445238.1-204ENST00000400311 463 ntBASIC5.58□□□□□ -1.52
TVP23AA6NH52 RNA5SP231-201ENST00000410496 138 ntBASIC5.58□□□□□ -1.52
TVP23AA6NH52 MEAF6P1-201ENST00000416092 327 ntBASIC5.58□□□□□ -1.52
TVP23AA6NH52 AP003385.1-201ENST00000426387 893 ntBASIC5.58□□□□□ -1.52
TVP23AA6NH52 SUMO2P8-201ENST00000434672 286 ntBASIC5.58□□□□□ -1.52
TVP23AA6NH52 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC5.58□□□□□ -1.52
TVP23AA6NH52 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.58□□□□□ -1.52
TVP23AA6NH52 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC5.58□□□□□ -1.52
TVP23AA6NH52 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC5.58□□□□□ -1.52
TVP23AA6NH52 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TVP23AA6NH52 UCK2-205ENST00000469256 753 ntTSL 3 BASIC5.58□□□□□ -1.52
TVP23AA6NH52 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC5.58□□□□□ -1.52
TVP23AA6NH52 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TVP23AA6NH52 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC5.58□□□□□ -1.52
TVP23AA6NH52 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
TVP23AA6NH52 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC5.58□□□□□ -1.52
TVP23AA6NH52 AC023080.1-201ENST00000551663 931 ntBASIC5.58□□□□□ -1.52
TVP23AA6NH52 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC5.58□□□□□ -1.52
TVP23AA6NH52 HNRNPCP1-201ENST00000556181 766 ntBASIC5.58□□□□□ -1.52
TVP23AA6NH52 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC5.58□□□□□ -1.52
TVP23AA6NH52 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC5.58□□□□□ -1.52
TVP23AA6NH52 AC090774.2-201ENST00000584708 322 ntBASIC5.58□□□□□ -1.52
TVP23AA6NH52 AL049840.6-201ENST00000604583 345 ntBASIC5.58□□□□□ -1.52
TVP23AA6NH52 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC5.58□□□□□ -1.52
TVP23AA6NH52 MIR7159-201ENST00000620587 66 ntBASIC5.58□□□□□ -1.52
TVP23AA6NH52 AP001153.1-201ENST00000641024 338 ntBASIC5.58□□□□□ -1.52
TVP23AA6NH52 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
TVP23AA6NH52 AL121768.1-201ENST00000613917 2544 ntBASIC5.58□□□□□ -1.52
TVP23AA6NH52 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
TVP23AA6NH52 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
TVP23AA6NH52 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TVP23AA6NH52 AC096921.2-201ENST00000561507 1916 ntBASIC5.58□□□□□ -1.52
TVP23AA6NH52 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
TVP23AA6NH52 NCOA4P2-201ENST00000340589 1813 ntBASIC5.58□□□□□ -1.52
TVP23AA6NH52 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
TVP23AA6NH52 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.57□□□□□ -1.52
TVP23AA6NH52 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.57□□□□□ -1.52
TVP23AA6NH52 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
TVP23AA6NH52 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.57□□□□□ -1.52
TVP23AA6NH52 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
TVP23AA6NH52 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
TVP23AA6NH52 NR1H5P-201ENST00000452683 1377 ntBASIC5.57□□□□□ -1.52
TVP23AA6NH52 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.57□□□□□ -1.52
TVP23AA6NH52 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
TVP23AA6NH52 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TVP23AA6NH52 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
TVP23AA6NH52 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
TVP23AA6NH52 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC5.57□□□□□ -1.52
TVP23AA6NH52 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
TVP23AA6NH52 AC092692.1-201ENST00000623625 2595 ntBASIC5.57□□□□□ -1.52
TVP23AA6NH52 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TVP23AA6NH52 RNU1-59P-201ENST00000364829 162 ntBASIC5.57□□□□□ -1.52
TVP23AA6NH52 TP63-205ENST00000392461 1251 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
TVP23AA6NH52 SMARCE1P6-201ENST00000398372 1216 ntBASIC5.57□□□□□ -1.52
TVP23AA6NH52 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC5.57□□□□□ -1.52
TVP23AA6NH52 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC5.57□□□□□ -1.52
TVP23AA6NH52 TFP1-201ENST00000460564 572 ntTSL 4 BASIC5.57□□□□□ -1.52
TVP23AA6NH52 AC073594.1-201ENST00000462065 364 ntBASIC5.57□□□□□ -1.52
TVP23AA6NH52 RN7SL413P-201ENST00000482700 297 ntBASIC5.57□□□□□ -1.52
TVP23AA6NH52 TFP1-203ENST00000490470 561 ntTSL 4 BASIC5.57□□□□□ -1.52
TVP23AA6NH52 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC5.57□□□□□ -1.52
TVP23AA6NH52 RNA5SP418-201ENST00000515951 117 ntBASIC5.57□□□□□ -1.52
TVP23AA6NH52 IGKV2-19-201ENST00000518132 283 ntBASIC5.57□□□□□ -1.52
TVP23AA6NH52 AC009729.1-201ENST00000548873 1133 ntBASIC5.57□□□□□ -1.52
TVP23AA6NH52 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC5.57□□□□□ -1.52
TVP23AA6NH52 AC005332.4-201ENST00000592752 579 ntBASIC5.57□□□□□ -1.52
TVP23AA6NH52 RPL7AP69-201ENST00000595306 806 ntBASIC5.57□□□□□ -1.52
TVP23AA6NH52 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC5.57□□□□□ -1.52
TVP23AA6NH52 U1.25-201ENST00000614085 162 ntBASIC5.57□□□□□ -1.52
TVP23AA6NH52 U1.34-201ENST00000618578 162 ntBASIC5.57□□□□□ -1.52
TVP23AA6NH52 U1.31-201ENST00000620022 160 ntBASIC5.57□□□□□ -1.52
TVP23AA6NH52 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
TVP23AA6NH52 AC016542.2-201ENST00000624201 619 ntBASIC5.57□□□□□ -1.52
TVP23AA6NH52 AC003992.1-201ENST00000635364 557 ntBASIC5.57□□□□□ -1.52
TVP23AA6NH52 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
TVP23AA6NH52 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC5.57□□□□□ -1.52
TVP23AA6NH52 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
TVP23AA6NH52 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
TVP23AA6NH52 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
TVP23AA6NH52 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms