Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 CEP41-213ENST00000489512 3161 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SHISA3A0PJX4 TROVE2-201ENST00000367441 1791 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
SHISA3A0PJX4 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SHISA3A0PJX4 FCGR2A-202ENST00000367972 1399 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
SHISA3A0PJX4 AC093844.1-201ENST00000514910 1361 ntBASIC6.57□□□□□ -1.36
SHISA3A0PJX4 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SHISA3A0PJX4 PTPRB-209ENST00000550857 5839 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
SHISA3A0PJX4 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC6.56□□□□□ -1.36
SHISA3A0PJX4 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC6.56□□□□□ -1.36
SHISA3A0PJX4 MC2R-201ENST00000327606 3656 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SHISA3A0PJX4 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SHISA3A0PJX4 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SHISA3A0PJX4 NANOG-201ENST00000229307 5183 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SHISA3A0PJX4 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SHISA3A0PJX4 MGAT4A-201ENST00000264968 8432 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SHISA3A0PJX4 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SHISA3A0PJX4 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC6.56□□□□□ -1.36
SHISA3A0PJX4 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC6.56□□□□□ -1.36
SHISA3A0PJX4 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SHISA3A0PJX4 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SHISA3A0PJX4 KCNMB2-201ENST00000358316 2271 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SHISA3A0PJX4 AC015871.3-201ENST00000618835 2261 ntBASIC6.56□□□□□ -1.36
SHISA3A0PJX4 SOX6-202ENST00000396356 8865 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
SHISA3A0PJX4 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
SHISA3A0PJX4 LIPG-201ENST00000261292 10441 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SHISA3A0PJX4 IL16-204ENST00000394660 9616 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
SHISA3A0PJX4 Z83820.1-201ENST00000456978 1499 ntBASIC6.56□□□□□ -1.36
SHISA3A0PJX4 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
SHISA3A0PJX4 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
SHISA3A0PJX4 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC6.56□□□□□ -1.36
SHISA3A0PJX4 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
SHISA3A0PJX4 LINC02035-201ENST00000610128 5476 ntBASIC6.56□□□□□ -1.36
SHISA3A0PJX4 OR4D6-201ENST00000300127 1054 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
SHISA3A0PJX4 AL672167.1-206ENST00000356293 943 ntBASIC6.56□□□□□ -1.36
SHISA3A0PJX4 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SHISA3A0PJX4 NR1I3-206ENST00000367984 1059 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SHISA3A0PJX4 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SHISA3A0PJX4 IL36G-202ENST00000376489 989 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SHISA3A0PJX4 TRAV5-201ENST00000390427 352 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
SHISA3A0PJX4 RPL23AP7-201ENST00000391616 738 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SHISA3A0PJX4 AL035467.1-201ENST00000403583 686 ntBASIC6.56□□□□□ -1.36
SHISA3A0PJX4 AL133406.1-201ENST00000404904 747 ntBASIC6.56□□□□□ -1.36
SHISA3A0PJX4 RN7SKP142-201ENST00000411236 328 ntBASIC6.56□□□□□ -1.36
SHISA3A0PJX4 AC007899.1-201ENST00000412776 775 ntBASIC6.56□□□□□ -1.36
SHISA3A0PJX4 CDK8P2-201ENST00000415020 547 ntBASIC6.56□□□□□ -1.36
SHISA3A0PJX4 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC6.56□□□□□ -1.36
SHISA3A0PJX4 AC008063.1-201ENST00000418335 640 ntTSL 3 BASIC6.56□□□□□ -1.36
SHISA3A0PJX4 AC027644.1-201ENST00000419595 298 ntBASIC6.56□□□□□ -1.36
SHISA3A0PJX4 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC6.56□□□□□ -1.36
SHISA3A0PJX4 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC6.56□□□□□ -1.36
SHISA3A0PJX4 RPSAP32-201ENST00000432681 526 ntBASIC6.56□□□□□ -1.36
SHISA3A0PJX4 BSNDP4-201ENST00000436076 388 ntBASIC6.56□□□□□ -1.36
SHISA3A0PJX4 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC6.56□□□□□ -1.36
SHISA3A0PJX4 RBMX2P4-201ENST00000441256 376 ntBASIC6.56□□□□□ -1.36
SHISA3A0PJX4 MIR4435-2HG-211ENST00000443467 826 ntTSL 3 BASIC6.56□□□□□ -1.36
SHISA3A0PJX4 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC6.56□□□□□ -1.36
SHISA3A0PJX4 AL161454.1-201ENST00000446226 569 ntBASIC6.56□□□□□ -1.36
SHISA3A0PJX4 RPL21P134-201ENST00000453468 483 ntBASIC6.56□□□□□ -1.36
SHISA3A0PJX4 TNR-IT1-201ENST00000455447 630 ntTSL 3 BASIC6.56□□□□□ -1.36
SHISA3A0PJX4 CFTRP1-201ENST00000456646 183 ntBASIC6.56□□□□□ -1.36
SHISA3A0PJX4 EIF4A2P4-201ENST00000458691 1196 ntBASIC6.56□□□□□ -1.36
SHISA3A0PJX4 RN7SL325P-201ENST00000460434 283 ntBASIC6.56□□□□□ -1.36
SHISA3A0PJX4 SLC17A1-203ENST00000468082 1242 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SHISA3A0PJX4 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC6.56□□□□□ -1.36
SHISA3A0PJX4 AC104763.1-201ENST00000475274 360 ntBASIC6.56□□□□□ -1.36
SHISA3A0PJX4 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC6.56□□□□□ -1.36
SHISA3A0PJX4 AC107398.1-201ENST00000486904 505 ntBASIC6.56□□□□□ -1.36
SHISA3A0PJX4 RPL23AP66-201ENST00000494341 479 ntBASIC6.56□□□□□ -1.36
SHISA3A0PJX4 LINC02059-201ENST00000503843 452 ntTSL 3 BASIC6.56□□□□□ -1.36
SHISA3A0PJX4 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC6.56□□□□□ -1.36
SHISA3A0PJX4 AC109464.2-201ENST00000510242 943 ntBASIC6.56□□□□□ -1.36
SHISA3A0PJX4 AC113352.1-201ENST00000513196 666 ntBASIC6.56□□□□□ -1.36
SHISA3A0PJX4 LINC02428-203ENST00000513793 438 ntTSL 5 BASIC6.56□□□□□ -1.36
SHISA3A0PJX4 AC097103.2-205ENST00000515247 567 ntTSL 4 BASIC6.56□□□□□ -1.36
SHISA3A0PJX4 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC6.56□□□□□ -1.36
SHISA3A0PJX4 AC106038.2-201ENST00000520706 568 ntBASIC6.56□□□□□ -1.36
SHISA3A0PJX4 C8orf87-201ENST00000521906 588 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SHISA3A0PJX4 AP000442.2-201ENST00000531108 440 ntTSL 3 BASIC6.56□□□□□ -1.36
SHISA3A0PJX4 AC090692.1-201ENST00000531569 541 ntTSL 3 BASIC6.56□□□□□ -1.36
SHISA3A0PJX4 AP004833.3-201ENST00000531893 322 ntBASIC6.56□□□□□ -1.36
SHISA3A0PJX4 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC6.56□□□□□ -1.36
SHISA3A0PJX4 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC6.56□□□□□ -1.36
SHISA3A0PJX4 AC007954.1-201ENST00000554198 494 ntBASIC6.56□□□□□ -1.36
SHISA3A0PJX4 AC245505.1-201ENST00000556398 224 ntBASIC6.56□□□□□ -1.36
SHISA3A0PJX4 MIR5708-201ENST00000579723 85 ntBASIC6.56□□□□□ -1.36
SHISA3A0PJX4 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC6.56□□□□□ -1.36
SHISA3A0PJX4 AC011472.3-201ENST00000586051 906 ntTSL 3 BASIC6.56□□□□□ -1.36
SHISA3A0PJX4 AC005495.1-201ENST00000586611 1211 ntBASIC6.56□□□□□ -1.36
SHISA3A0PJX4 HIGD1B-205ENST00000591513 547 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
SHISA3A0PJX4 AC068790.7-201ENST00000602347 528 ntBASIC6.56□□□□□ -1.36
SHISA3A0PJX4 WISP1-OT1-201ENST00000602893 642 ntBASIC6.56□□□□□ -1.36
SHISA3A0PJX4 AC128687.1-201ENST00000605304 619 ntBASIC6.56□□□□□ -1.36
SHISA3A0PJX4 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC6.56□□□□□ -1.36
SHISA3A0PJX4 AC016394.1-201ENST00000608444 833 ntBASIC6.56□□□□□ -1.36
SHISA3A0PJX4 AC017083.3-201ENST00000609955 700 ntBASIC6.56□□□□□ -1.36
SHISA3A0PJX4 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC6.56□□□□□ -1.36
SHISA3A0PJX4 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC6.56□□□□□ -1.36
SHISA3A0PJX4 AC245033.3-201ENST00000617986 224 ntBASIC6.56□□□□□ -1.36
SHISA3A0PJX4 AC022509.4-201ENST00000621404 572 ntBASIC6.56□□□□□ -1.36
SHISA3A0PJX4 AL450226.2-201ENST00000622913 439 ntBASIC6.56□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms