Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 AC093278.2-201ENST00000564956 2485 ntBASIC7.63□□□□□ -1.19
CTDP1Q9Y5B0 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CTDP1Q9Y5B0 TATDN2P3-201ENST00000452855 3665 ntBASIC7.63□□□□□ -1.19
CTDP1Q9Y5B0 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
CTDP1Q9Y5B0 DUXAP8-203ENST00000437781 2398 ntTSL 2 BASIC7.63□□□□□ -1.19
CTDP1Q9Y5B0 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC7.63□□□□□ -1.19
CTDP1Q9Y5B0 FGG-201ENST00000336098 1659 ntTSL 2 BASIC7.63□□□□□ -1.19
CTDP1Q9Y5B0 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CTDP1Q9Y5B0 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC7.63□□□□□ -1.19
CTDP1Q9Y5B0 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC7.62□□□□□ -1.19
CTDP1Q9Y5B0 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CTDP1Q9Y5B0 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CTDP1Q9Y5B0 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC7.62□□□□□ -1.19
CTDP1Q9Y5B0 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
CTDP1Q9Y5B0 AC005702.3-201ENST00000585345 1447 ntBASIC7.62□□□□□ -1.19
CTDP1Q9Y5B0 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC7.62□□□□□ -1.19
CTDP1Q9Y5B0 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CTDP1Q9Y5B0 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
CTDP1Q9Y5B0 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
CTDP1Q9Y5B0 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CTDP1Q9Y5B0 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC7.62□□□□□ -1.19
CTDP1Q9Y5B0 C11orf54-202ENST00000354421 1733 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CTDP1Q9Y5B0 TCP11X2-202ENST00000453326 1747 ntAPPRIS P1 TSL 2 BASIC7.62□□□□□ -1.19
CTDP1Q9Y5B0 TCP11X1-201ENST00000597070 1747 ntTSL 2 BASIC7.62□□□□□ -1.19
CTDP1Q9Y5B0 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CTDP1Q9Y5B0 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CTDP1Q9Y5B0 OR1A1-201ENST00000304094 930 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
CTDP1Q9Y5B0 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
CTDP1Q9Y5B0 RNU4-23P-201ENST00000362839 140 ntBASIC7.62□□□□□ -1.19
CTDP1Q9Y5B0 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CTDP1Q9Y5B0 RPL17P35-201ENST00000432217 549 ntBASIC7.62□□□□□ -1.19
CTDP1Q9Y5B0 AL158053.1-201ENST00000441503 453 ntBASIC7.62□□□□□ -1.19
CTDP1Q9Y5B0 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC7.62□□□□□ -1.19
CTDP1Q9Y5B0 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC7.62□□□□□ -1.19
CTDP1Q9Y5B0 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC7.62□□□□□ -1.19
CTDP1Q9Y5B0 CCNJP2-201ENST00000457810 1163 ntBASIC7.62□□□□□ -1.19
CTDP1Q9Y5B0 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC7.62□□□□□ -1.19
CTDP1Q9Y5B0 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC7.62□□□□□ -1.19
CTDP1Q9Y5B0 RPL37P23-201ENST00000492641 294 ntBASIC7.62□□□□□ -1.19
CTDP1Q9Y5B0 AL133372.1-201ENST00000493565 745 ntBASIC7.62□□□□□ -1.19
CTDP1Q9Y5B0 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC7.62□□□□□ -1.19
CTDP1Q9Y5B0 LECT2-203ENST00000512872 762 ntTSL 5 BASIC7.62□□□□□ -1.19
CTDP1Q9Y5B0 RNA5SP441-201ENST00000516809 88 ntBASIC7.62□□□□□ -1.19
CTDP1Q9Y5B0 OR52K3P-201ENST00000531655 943 ntBASIC7.62□□□□□ -1.19
CTDP1Q9Y5B0 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC7.62□□□□□ -1.19
CTDP1Q9Y5B0 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC7.62□□□□□ -1.19
CTDP1Q9Y5B0 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC7.62□□□□□ -1.19
CTDP1Q9Y5B0 AC023968.1-201ENST00000560719 475 ntBASIC7.62□□□□□ -1.19
CTDP1Q9Y5B0 AC004232.1-201ENST00000571388 208 ntBASIC7.62□□□□□ -1.19
CTDP1Q9Y5B0 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC7.62□□□□□ -1.19
CTDP1Q9Y5B0 MIR6721-201ENST00000617181 87 ntBASIC7.62□□□□□ -1.19
CTDP1Q9Y5B0 AC022960.3-201ENST00000619794 441 ntBASIC7.62□□□□□ -1.19
CTDP1Q9Y5B0 MIR8089-201ENST00000620165 82 ntBASIC7.62□□□□□ -1.19
CTDP1Q9Y5B0 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
CTDP1Q9Y5B0 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC7.62□□□□□ -1.19
CTDP1Q9Y5B0 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
CTDP1Q9Y5B0 SPECC1L-207ENST00000541492 3525 ntTSL 2 BASIC7.62□□□□□ -1.19
CTDP1Q9Y5B0 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC7.62□□□□□ -1.19
CTDP1Q9Y5B0 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC7.62□□□□□ -1.19
CTDP1Q9Y5B0 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC7.62□□□□□ -1.19
CTDP1Q9Y5B0 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
CTDP1Q9Y5B0 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
CTDP1Q9Y5B0 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC7.61□□□□□ -1.19
CTDP1Q9Y5B0 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC7.61□□□□□ -1.19
CTDP1Q9Y5B0 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CTDP1Q9Y5B0 AC096992.2-201ENST00000609553 1684 ntBASIC7.61□□□□□ -1.19
CTDP1Q9Y5B0 AC119674.1-204ENST00000641348 1343 ntBASIC7.61□□□□□ -1.19
CTDP1Q9Y5B0 ADA2-201ENST00000262607 3925 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
CTDP1Q9Y5B0 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC7.61□□□□□ -1.19
CTDP1Q9Y5B0 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CTDP1Q9Y5B0 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CTDP1Q9Y5B0 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC7.61□□□□□ -1.19
CTDP1Q9Y5B0 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC7.61□□□□□ -1.19
CTDP1Q9Y5B0 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CTDP1Q9Y5B0 MTCO3P43-201ENST00000440974 771 ntBASIC7.61□□□□□ -1.19
CTDP1Q9Y5B0 PGM5P3-AS1-202ENST00000442069 615 ntTSL 2 BASIC7.61□□□□□ -1.19
CTDP1Q9Y5B0 IGKV1OR10-1-201ENST00000442306 329 ntBASIC7.61□□□□□ -1.19
CTDP1Q9Y5B0 RPL5P10-201ENST00000445207 894 ntBASIC7.61□□□□□ -1.19
CTDP1Q9Y5B0 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CTDP1Q9Y5B0 IGKV1OR22-5-201ENST00000458718 354 ntBASIC7.61□□□□□ -1.19
CTDP1Q9Y5B0 RN7SL552P-201ENST00000462094 276 ntBASIC7.61□□□□□ -1.19
CTDP1Q9Y5B0 AC106822.1-201ENST00000502647 526 ntBASIC7.61□□□□□ -1.19
CTDP1Q9Y5B0 HMGN1P16-201ENST00000508308 283 ntBASIC7.61□□□□□ -1.19
CTDP1Q9Y5B0 MAST4-IT1-201ENST00000514241 658 ntBASIC7.61□□□□□ -1.19
CTDP1Q9Y5B0 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC7.61□□□□□ -1.19
CTDP1Q9Y5B0 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC7.61□□□□□ -1.19
CTDP1Q9Y5B0 AP004607.6-201ENST00000525033 1202 ntBASIC7.61□□□□□ -1.19
CTDP1Q9Y5B0 CYCSP25-201ENST00000525280 316 ntBASIC7.61□□□□□ -1.19
CTDP1Q9Y5B0 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC7.61□□□□□ -1.19
CTDP1Q9Y5B0 LINC02457-201ENST00000552992 596 ntTSL 4 BASIC7.61□□□□□ -1.19
CTDP1Q9Y5B0 AC009268.1-201ENST00000561352 1203 ntBASIC7.61□□□□□ -1.19
CTDP1Q9Y5B0 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC7.61□□□□□ -1.19
CTDP1Q9Y5B0 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC7.61□□□□□ -1.19
CTDP1Q9Y5B0 AC004232.2-201ENST00000574245 821 ntBASIC7.61□□□□□ -1.19
CTDP1Q9Y5B0 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC7.61□□□□□ -1.19
CTDP1Q9Y5B0 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC7.61□□□□□ -1.19
CTDP1Q9Y5B0 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC7.61□□□□□ -1.19
CTDP1Q9Y5B0 AC242628.1-201ENST00000606810 391 ntBASIC7.61□□□□□ -1.19
CTDP1Q9Y5B0 AC004908.3-201ENST00000610248 625 ntBASIC7.61□□□□□ -1.19
CTDP1Q9Y5B0 IGKV2OR2-10-201ENST00000613976 311 ntBASIC7.61□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms