Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 CASP4-201ENST00000393150 1340 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
KCNIP3Q9Y2W7 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC5.27□□□□□ -1.57
KCNIP3Q9Y2W7 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC5.27□□□□□ -1.57
KCNIP3Q9Y2W7 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.27□□□□□ -1.57
KCNIP3Q9Y2W7 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.27□□□□□ -1.57
KCNIP3Q9Y2W7 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
KCNIP3Q9Y2W7 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
KCNIP3Q9Y2W7 AC020633.1-201ENST00000468439 2247 ntBASIC5.27□□□□□ -1.57
KCNIP3Q9Y2W7 AC022164.1-201ENST00000568767 2673 ntBASIC5.27□□□□□ -1.57
KCNIP3Q9Y2W7 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
KCNIP3Q9Y2W7 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
KCNIP3Q9Y2W7 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
KCNIP3Q9Y2W7 RNA5SP321-201ENST00000362722 111 ntBASIC5.27□□□□□ -1.57
KCNIP3Q9Y2W7 MIR433-201ENST00000384837 93 ntBASIC5.27□□□□□ -1.57
KCNIP3Q9Y2W7 RN7SKP17-201ENST00000411242 351 ntBASIC5.27□□□□□ -1.57
KCNIP3Q9Y2W7 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.27□□□□□ -1.57
KCNIP3Q9Y2W7 RPLP1P10-201ENST00000413972 339 ntBASIC5.27□□□□□ -1.57
KCNIP3Q9Y2W7 AL354868.1-201ENST00000417077 482 ntBASIC5.27□□□□□ -1.57
KCNIP3Q9Y2W7 AC109638.1-201ENST00000417406 326 ntBASIC5.27□□□□□ -1.57
KCNIP3Q9Y2W7 RTCA-AS1-201ENST00000421185 423 ntTSL 3 BASIC5.27□□□□□ -1.57
KCNIP3Q9Y2W7 ETDB-201ENST00000423661 681 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
KCNIP3Q9Y2W7 AC006013.1-201ENST00000424888 758 ntTSL 3 BASIC5.27□□□□□ -1.57
KCNIP3Q9Y2W7 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC5.27□□□□□ -1.57
KCNIP3Q9Y2W7 ETDB-202ENST00000426364 388 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
KCNIP3Q9Y2W7 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.27□□□□□ -1.57
KCNIP3Q9Y2W7 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
KCNIP3Q9Y2W7 AC125238.2-201ENST00000430003 1440 ntBASIC5.27□□□□□ -1.57
KCNIP3Q9Y2W7 AL365220.1-201ENST00000432923 399 ntBASIC5.27□□□□□ -1.57
KCNIP3Q9Y2W7 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.27□□□□□ -1.57
KCNIP3Q9Y2W7 OSTCP2-201ENST00000437956 444 ntBASIC5.27□□□□□ -1.57
KCNIP3Q9Y2W7 ETDA-202ENST00000454551 388 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
KCNIP3Q9Y2W7 Z83838.1-202ENST00000456225 839 ntBASIC5.27□□□□□ -1.57
KCNIP3Q9Y2W7 RN7SL72P-201ENST00000460697 269 ntBASIC5.27□□□□□ -1.57
KCNIP3Q9Y2W7 RN7SL145P-201ENST00000469955 296 ntBASIC5.27□□□□□ -1.57
KCNIP3Q9Y2W7 RPL7AP30-201ENST00000482859 796 ntBASIC5.27□□□□□ -1.57
KCNIP3Q9Y2W7 AC084026.1-201ENST00000522028 564 ntTSL 4 BASIC5.27□□□□□ -1.57
KCNIP3Q9Y2W7 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC5.27□□□□□ -1.57
KCNIP3Q9Y2W7 AC078929.1-201ENST00000547679 502 ntTSL 3 BASIC5.27□□□□□ -1.57
KCNIP3Q9Y2W7 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC5.27□□□□□ -1.57
KCNIP3Q9Y2W7 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC5.27□□□□□ -1.57
KCNIP3Q9Y2W7 AC013356.3-201ENST00000558601 584 ntTSL 3 BASIC5.27□□□□□ -1.57
KCNIP3Q9Y2W7 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.27□□□□□ -1.57
KCNIP3Q9Y2W7 AL136084.2-214ENST00000587726 716 ntTSL 5 BASIC5.27□□□□□ -1.57
KCNIP3Q9Y2W7 NDUFA3P1-201ENST00000588007 252 ntBASIC5.27□□□□□ -1.57
KCNIP3Q9Y2W7 AC007671.1-201ENST00000616957 830 ntBASIC5.27□□□□□ -1.57
KCNIP3Q9Y2W7 MRPL57P3-201ENST00000619218 176 ntBASIC5.27□□□□□ -1.57
KCNIP3Q9Y2W7 FKBP1AP4-201ENST00000631775 336 ntBASIC5.27□□□□□ -1.57
KCNIP3Q9Y2W7 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC5.27□□□□□ -1.57
KCNIP3Q9Y2W7 METTL15-210ENST00000634721 1182 ntTSL 5 BASIC5.27□□□□□ -1.57
KCNIP3Q9Y2W7 CCDC196-207ENST00000636229 1107 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
KCNIP3Q9Y2W7 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
KCNIP3Q9Y2W7 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
KCNIP3Q9Y2W7 MTCO1P7-201ENST00000419523 1542 ntBASIC5.27□□□□□ -1.57
KCNIP3Q9Y2W7 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.27□□□□□ -1.57
KCNIP3Q9Y2W7 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
KCNIP3Q9Y2W7 SAGE3P-201ENST00000619800 1635 ntBASIC5.26□□□□□ -1.57
KCNIP3Q9Y2W7 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
KCNIP3Q9Y2W7 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
KCNIP3Q9Y2W7 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.26□□□□□ -1.57
KCNIP3Q9Y2W7 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.26□□□□□ -1.57
KCNIP3Q9Y2W7 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.26□□□□□ -1.57
KCNIP3Q9Y2W7 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.26□□□□□ -1.57
KCNIP3Q9Y2W7 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
KCNIP3Q9Y2W7 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.26□□□□□ -1.57
KCNIP3Q9Y2W7 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.26□□□□□ -1.57
KCNIP3Q9Y2W7 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
KCNIP3Q9Y2W7 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC5.26□□□□□ -1.57
KCNIP3Q9Y2W7 S100A7-201ENST00000368722 442 ntAPPRIS P1 TSL 3 BASIC5.26□□□□□ -1.57
KCNIP3Q9Y2W7 TRAV12-3-201ENST00000390442 399 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
KCNIP3Q9Y2W7 RNA5SP176-201ENST00000390956 110 ntBASIC5.26□□□□□ -1.57
KCNIP3Q9Y2W7 AC245036.1-201ENST00000391727 309 ntBASIC5.26□□□□□ -1.57
KCNIP3Q9Y2W7 PDCL3P5-201ENST00000398028 722 ntBASIC5.26□□□□□ -1.57
KCNIP3Q9Y2W7 TIMD4-203ENST00000407087 1145 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
KCNIP3Q9Y2W7 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC5.26□□□□□ -1.57
KCNIP3Q9Y2W7 AL390195.1-202ENST00000416099 723 ntTSL 2 BASIC5.26□□□□□ -1.57
KCNIP3Q9Y2W7 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.26□□□□□ -1.57
KCNIP3Q9Y2W7 LINC00687-201ENST00000427835 558 ntTSL 3 BASIC5.26□□□□□ -1.57
KCNIP3Q9Y2W7 SNX18P9-201ENST00000440580 835 ntBASIC5.26□□□□□ -1.57
KCNIP3Q9Y2W7 RPL5P10-201ENST00000445207 894 ntBASIC5.26□□□□□ -1.57
KCNIP3Q9Y2W7 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC5.26□□□□□ -1.57
KCNIP3Q9Y2W7 RN7SL263P-201ENST00000467969 290 ntBASIC5.26□□□□□ -1.57
KCNIP3Q9Y2W7 SSR1-206ENST00000479365 1118 ntTSL 5 BASIC5.26□□□□□ -1.57
KCNIP3Q9Y2W7 RPL19P11-201ENST00000495944 589 ntBASIC5.26□□□□□ -1.57
KCNIP3Q9Y2W7 GAPDHP38-201ENST00000503632 1002 ntBASIC5.26□□□□□ -1.57
KCNIP3Q9Y2W7 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC5.26□□□□□ -1.57
KCNIP3Q9Y2W7 AP005902.2-201ENST00000518393 307 ntBASIC5.26□□□□□ -1.57
KCNIP3Q9Y2W7 C14orf159-213ENST00000519019 834 ntTSL 3 BASIC5.26□□□□□ -1.57
KCNIP3Q9Y2W7 TBCA-209ENST00000522370 435 ntTSL 3 BASIC5.26□□□□□ -1.57
KCNIP3Q9Y2W7 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.26□□□□□ -1.57
KCNIP3Q9Y2W7 AC132192.1-201ENST00000531111 597 ntTSL 3 BASIC5.26□□□□□ -1.57
KCNIP3Q9Y2W7 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC5.26□□□□□ -1.57
KCNIP3Q9Y2W7 KLRD1-210ENST00000543777 789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
KCNIP3Q9Y2W7 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
KCNIP3Q9Y2W7 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC5.26□□□□□ -1.57
KCNIP3Q9Y2W7 LINC02322-201ENST00000554773 338 ntTSL 2 BASIC5.26□□□□□ -1.57
KCNIP3Q9Y2W7 INO80-AS1-202ENST00000560178 444 ntTSL 3 BASIC5.26□□□□□ -1.57
KCNIP3Q9Y2W7 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC5.26□□□□□ -1.57
KCNIP3Q9Y2W7 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.26□□□□□ -1.57
KCNIP3Q9Y2W7 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC5.26□□□□□ -1.57
KCNIP3Q9Y2W7 MIR378C-201ENST00000578683 81 ntBASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 12 ms