Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 AL450336.1-201ENST00000605180 586 ntBASIC7.17□□□□□ -1.26
PPARGC1AQ9UBK2 AC106052.1-201ENST00000608029 497 ntBASIC7.17□□□□□ -1.26
PPARGC1AQ9UBK2 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
PPARGC1AQ9UBK2 AC079395.3-201ENST00000615161 484 ntBASIC7.17□□□□□ -1.26
PPARGC1AQ9UBK2 AC140479.4-205ENST00000636339 820 ntBASIC7.17□□□□□ -1.26
PPARGC1AQ9UBK2 AC068620.4-201ENST00000636730 1182 ntBASIC7.17□□□□□ -1.26
PPARGC1AQ9UBK2 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
PPARGC1AQ9UBK2 DDX43P1-201ENST00000510713 1763 ntBASIC7.17□□□□□ -1.26
PPARGC1AQ9UBK2 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
PPARGC1AQ9UBK2 SFTPD-AS1-201ENST00000608229 5001 ntBASIC7.17□□□□□ -1.26
PPARGC1AQ9UBK2 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC7.17□□□□□ -1.26
PPARGC1AQ9UBK2 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC7.17□□□□□ -1.26
PPARGC1AQ9UBK2 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC7.17□□□□□ -1.26
PPARGC1AQ9UBK2 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
PPARGC1AQ9UBK2 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
PPARGC1AQ9UBK2 OVAAL-201ENST00000442621 1489 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
PPARGC1AQ9UBK2 FDFT1-208ENST00000525777 1472 ntTSL 2 BASIC7.17□□□□□ -1.26
PPARGC1AQ9UBK2 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
PPARGC1AQ9UBK2 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC7.17□□□□□ -1.26
PPARGC1AQ9UBK2 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC7.17□□□□□ -1.26
PPARGC1AQ9UBK2 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
PPARGC1AQ9UBK2 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
PPARGC1AQ9UBK2 ATP5BP1-201ENST00000411980 1574 ntBASIC7.16□□□□□ -1.26
PPARGC1AQ9UBK2 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC7.16□□□□□ -1.26
PPARGC1AQ9UBK2 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC7.16□□□□□ -1.26
PPARGC1AQ9UBK2 ZNF812P-201ENST00000457674 1694 ntBASIC7.16□□□□□ -1.26
PPARGC1AQ9UBK2 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
PPARGC1AQ9UBK2 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC7.16□□□□□ -1.26
PPARGC1AQ9UBK2 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC7.16□□□□□ -1.26
PPARGC1AQ9UBK2 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC7.16□□□□□ -1.26
PPARGC1AQ9UBK2 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC7.16□□□□□ -1.26
PPARGC1AQ9UBK2 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC7.16□□□□□ -1.26
PPARGC1AQ9UBK2 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC7.16□□□□□ -1.26
PPARGC1AQ9UBK2 DMD-202ENST00000343523 5623 ntTSL 5 BASIC7.16□□□□□ -1.26
PPARGC1AQ9UBK2 CUL4AP1-201ENST00000514750 1863 ntBASIC7.16□□□□□ -1.26
PPARGC1AQ9UBK2 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
PPARGC1AQ9UBK2 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
PPARGC1AQ9UBK2 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
PPARGC1AQ9UBK2 MIR365B-201ENST00000362317 111 ntBASIC7.16□□□□□ -1.26
PPARGC1AQ9UBK2 RN7SKP257-201ENST00000364525 309 ntBASIC7.16□□□□□ -1.26
PPARGC1AQ9UBK2 RNA5SP355-201ENST00000365317 135 ntBASIC7.16□□□□□ -1.26
PPARGC1AQ9UBK2 MIR138-2-201ENST00000384916 84 ntBASIC7.16□□□□□ -1.26
PPARGC1AQ9UBK2 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
PPARGC1AQ9UBK2 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
PPARGC1AQ9UBK2 MRPL32P1-201ENST00000406301 247 ntBASIC7.16□□□□□ -1.26
PPARGC1AQ9UBK2 RPL23AP18-201ENST00000416139 468 ntBASIC7.16□□□□□ -1.26
PPARGC1AQ9UBK2 RPL36P18-201ENST00000419316 318 ntBASIC7.16□□□□□ -1.26
PPARGC1AQ9UBK2 ARL2BPP3-201ENST00000421226 480 ntBASIC7.16□□□□□ -1.26
PPARGC1AQ9UBK2 LINC00575-201ENST00000426551 910 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
PPARGC1AQ9UBK2 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC7.16□□□□□ -1.26
PPARGC1AQ9UBK2 KCND3-AS1-202ENST00000427471 583 ntTSL 3 BASIC7.16□□□□□ -1.26
PPARGC1AQ9UBK2 AC091390.2-201ENST00000432573 374 ntBASIC7.16□□□□□ -1.26
PPARGC1AQ9UBK2 AL606490.7-201ENST00000433136 191 ntBASIC7.16□□□□□ -1.26
PPARGC1AQ9UBK2 ZNF138-205ENST00000440155 1066 ntAPPRIS P3 TSL 2 BASIC7.16□□□□□ -1.26
PPARGC1AQ9UBK2 SEPT7P2-208ENST00000444755 505 ntTSL 3 BASIC7.16□□□□□ -1.26
PPARGC1AQ9UBK2 EXOSC3P1-201ENST00000448649 500 ntBASIC7.16□□□□□ -1.26
PPARGC1AQ9UBK2 AL451063.1-201ENST00000450164 1133 ntBASIC7.16□□□□□ -1.26
PPARGC1AQ9UBK2 AL133480.2-201ENST00000456723 487 ntBASIC7.16□□□□□ -1.26
PPARGC1AQ9UBK2 EIF3LP2-201ENST00000457262 807 ntBASIC7.16□□□□□ -1.26
PPARGC1AQ9UBK2 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC7.16□□□□□ -1.26
PPARGC1AQ9UBK2 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC7.16□□□□□ -1.26
PPARGC1AQ9UBK2 KCNU1-202ENST00000518904 334 ntTSL 2 BASIC7.16□□□□□ -1.26
PPARGC1AQ9UBK2 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC7.16□□□□□ -1.26
PPARGC1AQ9UBK2 RBMS2P1-201ENST00000525031 1226 ntBASIC7.16□□□□□ -1.26
PPARGC1AQ9UBK2 AC130366.1-201ENST00000526505 1192 ntBASIC7.16□□□□□ -1.26
PPARGC1AQ9UBK2 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC7.16□□□□□ -1.26
PPARGC1AQ9UBK2 FXNP1-201ENST00000555153 337 ntBASIC7.16□□□□□ -1.26
PPARGC1AQ9UBK2 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC7.16□□□□□ -1.26
PPARGC1AQ9UBK2 AC124283.4-201ENST00000581815 456 ntBASIC7.16□□□□□ -1.26
PPARGC1AQ9UBK2 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC7.16□□□□□ -1.26
PPARGC1AQ9UBK2 MIR7515HG-250ENST00000592565 856 ntTSL 5 BASIC7.16□□□□□ -1.26
PPARGC1AQ9UBK2 AC010519.1-201ENST00000599924 344 ntTSL 5 BASIC7.16□□□□□ -1.26
PPARGC1AQ9UBK2 AC026951.2-201ENST00000613847 241 ntBASIC7.16□□□□□ -1.26
PPARGC1AQ9UBK2 AC112694.2-201ENST00000623697 768 ntBASIC7.16□□□□□ -1.26
PPARGC1AQ9UBK2 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC7.16□□□□□ -1.26
PPARGC1AQ9UBK2 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC7.16□□□□□ -1.26
PPARGC1AQ9UBK2 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
PPARGC1AQ9UBK2 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
PPARGC1AQ9UBK2 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
PPARGC1AQ9UBK2 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
PPARGC1AQ9UBK2 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
PPARGC1AQ9UBK2 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
PPARGC1AQ9UBK2 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
PPARGC1AQ9UBK2 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
PPARGC1AQ9UBK2 CYP2G2P-201ENST00000594920 1485 ntBASIC7.16□□□□□ -1.26
PPARGC1AQ9UBK2 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
PPARGC1AQ9UBK2 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
PPARGC1AQ9UBK2 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
PPARGC1AQ9UBK2 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
PPARGC1AQ9UBK2 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.26
PPARGC1AQ9UBK2 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC7.15□□□□□ -1.26
PPARGC1AQ9UBK2 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC7.15□□□□□ -1.26
PPARGC1AQ9UBK2 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
PPARGC1AQ9UBK2 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC7.15□□□□□ -1.26
PPARGC1AQ9UBK2 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC7.15□□□□□ -1.26
PPARGC1AQ9UBK2 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC7.15□□□□□ -1.26
PPARGC1AQ9UBK2 RPL12P13-201ENST00000310055 497 ntBASIC7.15□□□□□ -1.26
PPARGC1AQ9UBK2 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
PPARGC1AQ9UBK2 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
PPARGC1AQ9UBK2 RN7SKP28-201ENST00000364770 305 ntBASIC7.15□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms