Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 RNU6-491P-201ENST00000516099 110 ntBASIC6.28□□□□□ -1.4
AMBRA1Q9C0C7 SUMO2P19-201ENST00000518920 295 ntBASIC6.28□□□□□ -1.4
AMBRA1Q9C0C7 AC011333.1-201ENST00000520587 436 ntTSL 3 BASIC6.28□□□□□ -1.4
AMBRA1Q9C0C7 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC6.28□□□□□ -1.4
AMBRA1Q9C0C7 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC6.28□□□□□ -1.4
AMBRA1Q9C0C7 YWHAZP1-201ENST00000556286 722 ntBASIC6.28□□□□□ -1.4
AMBRA1Q9C0C7 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC6.28□□□□□ -1.4
AMBRA1Q9C0C7 MRPS21P9-201ENST00000571150 257 ntBASIC6.28□□□□□ -1.4
AMBRA1Q9C0C7 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC6.28□□□□□ -1.4
AMBRA1Q9C0C7 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC6.28□□□□□ -1.4
AMBRA1Q9C0C7 AC112220.2-201ENST00000605513 533 ntBASIC6.28□□□□□ -1.4
AMBRA1Q9C0C7 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC6.28□□□□□ -1.4
AMBRA1Q9C0C7 AC004908.1-201ENST00000606572 541 ntBASIC6.28□□□□□ -1.4
AMBRA1Q9C0C7 AC245407.2-201ENST00000614199 451 ntBASIC6.28□□□□□ -1.4
AMBRA1Q9C0C7 AP003789.1-201ENST00000617737 605 ntBASIC6.28□□□□□ -1.4
AMBRA1Q9C0C7 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC6.28□□□□□ -1.4
AMBRA1Q9C0C7 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC6.28□□□□□ -1.4
AMBRA1Q9C0C7 AL356585.10-201ENST00000641883 123 ntBASIC6.28□□□□□ -1.4
AMBRA1Q9C0C7 FTO-215ENST00000636491 1676 ntTSL 5 BASIC6.28□□□□□ -1.4
AMBRA1Q9C0C7 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
AMBRA1Q9C0C7 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
AMBRA1Q9C0C7 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
AMBRA1Q9C0C7 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC6.28□□□□□ -1.4
AMBRA1Q9C0C7 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC6.28□□□□□ -1.4
AMBRA1Q9C0C7 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
AMBRA1Q9C0C7 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
AMBRA1Q9C0C7 DCSTAMP-208ENST00000622554 1471 ntTSL 5 BASIC6.28□□□□□ -1.4
AMBRA1Q9C0C7 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC6.27□□□□□ -1.4
AMBRA1Q9C0C7 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC6.27□□□□□ -1.41
AMBRA1Q9C0C7 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
AMBRA1Q9C0C7 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.27□□□□□ -1.41
AMBRA1Q9C0C7 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
AMBRA1Q9C0C7 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
AMBRA1Q9C0C7 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC6.27□□□□□ -1.41
AMBRA1Q9C0C7 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
AMBRA1Q9C0C7 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
AMBRA1Q9C0C7 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
AMBRA1Q9C0C7 AC009779.8-201ENST00000641684 4384 ntBASIC6.27□□□□□ -1.41
AMBRA1Q9C0C7 AIG1-209ENST00000629020 3636 ntTSL 2 BASIC6.27□□□□□ -1.41
AMBRA1Q9C0C7 AC006511.3-201ENST00000624929 1783 ntBASIC6.27□□□□□ -1.41
AMBRA1Q9C0C7 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
AMBRA1Q9C0C7 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
AMBRA1Q9C0C7 OR4K1-201ENST00000285600 1076 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
AMBRA1Q9C0C7 DEFB4A-201ENST00000302247 380 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
AMBRA1Q9C0C7 SNORD115-48-201ENST00000364764 76 ntBASIC6.27□□□□□ -1.41
AMBRA1Q9C0C7 RNU12-2P-201ENST00000364789 156 ntBASIC6.27□□□□□ -1.41
AMBRA1Q9C0C7 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
AMBRA1Q9C0C7 TRAV38-1-201ENST00000390464 353 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
AMBRA1Q9C0C7 AP003170.5-201ENST00000397185 335 ntBASIC6.27□□□□□ -1.41
AMBRA1Q9C0C7 AC024937.2-201ENST00000411669 1242 ntBASIC6.27□□□□□ -1.41
AMBRA1Q9C0C7 MICG-208ENST00000416822 132 ntBASIC6.27□□□□□ -1.41
AMBRA1Q9C0C7 AC106870.2-201ENST00000421411 691 ntTSL 3 BASIC6.27□□□□□ -1.41
AMBRA1Q9C0C7 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC6.27□□□□□ -1.41
AMBRA1Q9C0C7 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC6.27□□□□□ -1.41
AMBRA1Q9C0C7 AC245452.2-201ENST00000435222 392 ntBASIC6.27□□□□□ -1.41
AMBRA1Q9C0C7 LINC01762-205ENST00000437308 539 ntTSL 3 BASIC6.27□□□□□ -1.41
AMBRA1Q9C0C7 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC6.27□□□□□ -1.41
AMBRA1Q9C0C7 AL645931.1-201ENST00000439737 410 ntBASIC6.27□□□□□ -1.41
AMBRA1Q9C0C7 AL445465.1-204ENST00000440220 447 ntTSL 3 BASIC6.27□□□□□ -1.41
AMBRA1Q9C0C7 AC007000.2-201ENST00000442564 487 ntBASIC6.27□□□□□ -1.41
AMBRA1Q9C0C7 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC6.27□□□□□ -1.41
AMBRA1Q9C0C7 PPIAP32-201ENST00000449940 472 ntBASIC6.27□□□□□ -1.41
AMBRA1Q9C0C7 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC6.27□□□□□ -1.41
AMBRA1Q9C0C7 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC6.27□□□□□ -1.41
AMBRA1Q9C0C7 SRP68P2-201ENST00000456184 254 ntBASIC6.27□□□□□ -1.41
AMBRA1Q9C0C7 RPSAP48-201ENST00000466509 889 ntBASIC6.27□□□□□ -1.41
AMBRA1Q9C0C7 RPL23AP73-201ENST00000492507 471 ntBASIC6.27□□□□□ -1.41
AMBRA1Q9C0C7 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC6.27□□□□□ -1.41
AMBRA1Q9C0C7 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC6.27□□□□□ -1.41
AMBRA1Q9C0C7 NREP-217ENST00000509025 987 ntTSL 3 BASIC6.27□□□□□ -1.41
AMBRA1Q9C0C7 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC6.27□□□□□ -1.41
AMBRA1Q9C0C7 RNU6-889P-201ENST00000517189 103 ntBASIC6.27□□□□□ -1.41
AMBRA1Q9C0C7 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC6.27□□□□□ -1.41
AMBRA1Q9C0C7 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC6.27□□□□□ -1.41
AMBRA1Q9C0C7 AC107952.1-201ENST00000524200 376 ntBASIC6.27□□□□□ -1.41
AMBRA1Q9C0C7 AC130366.1-201ENST00000526505 1192 ntBASIC6.27□□□□□ -1.41
AMBRA1Q9C0C7 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC6.27□□□□□ -1.41
AMBRA1Q9C0C7 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC6.27□□□□□ -1.41
AMBRA1Q9C0C7 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC6.27□□□□□ -1.41
AMBRA1Q9C0C7 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
AMBRA1Q9C0C7 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC6.27□□□□□ -1.41
AMBRA1Q9C0C7 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC6.27□□□□□ -1.41
AMBRA1Q9C0C7 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC6.27□□□□□ -1.41
AMBRA1Q9C0C7 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC6.27□□□□□ -1.41
AMBRA1Q9C0C7 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC6.27□□□□□ -1.41
AMBRA1Q9C0C7 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC6.27□□□□□ -1.41
AMBRA1Q9C0C7 AC073539.3-201ENST00000601905 386 ntTSL 3 BASIC6.27□□□□□ -1.41
AMBRA1Q9C0C7 AC099654.8-201ENST00000637757 681 ntBASIC6.27□□□□□ -1.41
AMBRA1Q9C0C7 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
AMBRA1Q9C0C7 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
AMBRA1Q9C0C7 ZNF880-202ENST00000422689 2230 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
AMBRA1Q9C0C7 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
AMBRA1Q9C0C7 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
AMBRA1Q9C0C7 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC6.27□□□□□ -1.41
AMBRA1Q9C0C7 AC093844.1-201ENST00000514910 1361 ntBASIC6.27□□□□□ -1.41
AMBRA1Q9C0C7 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
AMBRA1Q9C0C7 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
AMBRA1Q9C0C7 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC6.27□□□□□ -1.41
AMBRA1Q9C0C7 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
AMBRA1Q9C0C7 OR52B5P-204ENST00000641744 3467 ntBASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms