Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 NIP7P1-201ENST00000433227 512 ntBASIC7.23□□□□□ -1.25
TRIM55Q9BYV6 LINC01805-201ENST00000436433 572 ntTSL 5 BASIC7.23□□□□□ -1.25
TRIM55Q9BYV6 AC098483.1-201ENST00000438623 955 ntTSL 5 BASIC7.23□□□□□ -1.25
TRIM55Q9BYV6 AC007064.2-201ENST00000442403 500 ntTSL 5 BASIC7.23□□□□□ -1.25
TRIM55Q9BYV6 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC7.23□□□□□ -1.25
TRIM55Q9BYV6 AL138930.1-201ENST00000446952 635 ntTSL 3 BASIC7.23□□□□□ -1.25
TRIM55Q9BYV6 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC7.23□□□□□ -1.25
TRIM55Q9BYV6 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC7.23□□□□□ -1.25
TRIM55Q9BYV6 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC7.23□□□□□ -1.25
TRIM55Q9BYV6 NDUFB4P1-201ENST00000462398 381 ntBASIC7.23□□□□□ -1.25
TRIM55Q9BYV6 AC023245.1-201ENST00000468501 517 ntBASIC7.23□□□□□ -1.25
TRIM55Q9BYV6 AC040975.1-201ENST00000472104 316 ntBASIC7.23□□□□□ -1.25
TRIM55Q9BYV6 RPL21P131-201ENST00000497298 483 ntBASIC7.23□□□□□ -1.25
TRIM55Q9BYV6 AC113383.1-205ENST00000502253 792 ntTSL 2 BASIC7.23□□□□□ -1.25
TRIM55Q9BYV6 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
TRIM55Q9BYV6 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC7.23□□□□□ -1.25
TRIM55Q9BYV6 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
TRIM55Q9BYV6 AC233724.10-201ENST00000510454 409 ntBASIC7.23□□□□□ -1.25
TRIM55Q9BYV6 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC7.23□□□□□ -1.25
TRIM55Q9BYV6 AC011410.1-201ENST00000524175 705 ntTSL 5 BASIC7.23□□□□□ -1.25
TRIM55Q9BYV6 AP000880.1-202ENST00000526487 588 ntTSL 3 BASIC7.23□□□□□ -1.25
TRIM55Q9BYV6 FOLH1B-202ENST00000529567 2145 ntBASIC7.23□□□□□ -1.25
TRIM55Q9BYV6 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC7.23□□□□□ -1.25
TRIM55Q9BYV6 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC7.23□□□□□ -1.25
TRIM55Q9BYV6 RNASE11-206ENST00000553849 1101 ntAPPRIS P2 TSL 1 (best) BASIC7.23□□□□□ -1.25
TRIM55Q9BYV6 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC7.23□□□□□ -1.25
TRIM55Q9BYV6 AC007950.1-201ENST00000560465 615 ntTSL 3 BASIC7.23□□□□□ -1.25
TRIM55Q9BYV6 MT1B-202ENST00000562399 351 ntTSL 3 BASIC7.23□□□□□ -1.25
TRIM55Q9BYV6 ULK4P1-202ENST00000565174 503 ntBASIC7.23□□□□□ -1.25
TRIM55Q9BYV6 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
TRIM55Q9BYV6 AC005412.1-201ENST00000580812 1049 ntBASIC7.23□□□□□ -1.25
TRIM55Q9BYV6 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC7.23□□□□□ -1.25
TRIM55Q9BYV6 AC012370.2-202ENST00000600508 1099 ntTSL 5 BASIC7.23□□□□□ -1.25
TRIM55Q9BYV6 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC7.23□□□□□ -1.25
TRIM55Q9BYV6 AL512430.4-201ENST00000603085 613 ntBASIC7.23□□□□□ -1.25
TRIM55Q9BYV6 AL021918.1-201ENST00000603933 236 ntBASIC7.23□□□□□ -1.25
TRIM55Q9BYV6 AC022079.1-201ENST00000621546 602 ntBASIC7.23□□□□□ -1.25
TRIM55Q9BYV6 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
TRIM55Q9BYV6 GPX6-201ENST00000361902 1712 ntAPPRIS P2 TSL 1 (best) BASIC7.23□□□□□ -1.25
TRIM55Q9BYV6 GPX6-204ENST00000612264 1709 ntAPPRIS ALT1 TSL 5 BASIC7.23□□□□□ -1.25
TRIM55Q9BYV6 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC7.23□□□□□ -1.25
TRIM55Q9BYV6 CD300E-201ENST00000392619 3501 ntAPPRIS P2 TSL 1 (best) BASIC7.23□□□□□ -1.25
TRIM55Q9BYV6 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
TRIM55Q9BYV6 SERPINA11-201ENST00000334708 1476 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
TRIM55Q9BYV6 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC7.23□□□□□ -1.25
TRIM55Q9BYV6 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
TRIM55Q9BYV6 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC7.23□□□□□ -1.25
TRIM55Q9BYV6 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
TRIM55Q9BYV6 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
TRIM55Q9BYV6 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC7.22□□□□□ -1.25
TRIM55Q9BYV6 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC7.22□□□□□ -1.25
TRIM55Q9BYV6 LEKR1-204ENST00000470811 2881 ntTSL 2 BASIC7.22□□□□□ -1.25
TRIM55Q9BYV6 TMC5-208ENST00000564959 2434 ntTSL 2 BASIC7.22□□□□□ -1.25
TRIM55Q9BYV6 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC7.22□□□□□ -1.25
TRIM55Q9BYV6 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
TRIM55Q9BYV6 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
TRIM55Q9BYV6 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
TRIM55Q9BYV6 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
TRIM55Q9BYV6 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
TRIM55Q9BYV6 ASNS-214ENST00000455086 1588 ntTSL 2 BASIC7.22□□□□□ -1.25
TRIM55Q9BYV6 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC7.22□□□□□ -1.25
TRIM55Q9BYV6 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
TRIM55Q9BYV6 PRLR-213ENST00000514088 1440 ntTSL 5 BASIC7.22□□□□□ -1.25
TRIM55Q9BYV6 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
TRIM55Q9BYV6 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC7.22□□□□□ -1.25
TRIM55Q9BYV6 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC7.22□□□□□ -1.25
TRIM55Q9BYV6 RN7SKP85-201ENST00000411349 318 ntBASIC7.22□□□□□ -1.25
TRIM55Q9BYV6 AL590806.1-201ENST00000415818 853 ntBASIC7.22□□□□□ -1.25
TRIM55Q9BYV6 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC7.22□□□□□ -1.25
TRIM55Q9BYV6 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC7.22□□□□□ -1.25
TRIM55Q9BYV6 AC003071.2-201ENST00000423857 315 ntBASIC7.22□□□□□ -1.25
TRIM55Q9BYV6 RPL5P2-201ENST00000429598 854 ntBASIC7.22□□□□□ -1.25
TRIM55Q9BYV6 OSTN-AS1-201ENST00000430375 515 ntTSL 5 BASIC7.22□□□□□ -1.25
TRIM55Q9BYV6 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC7.22□□□□□ -1.25
TRIM55Q9BYV6 AL606804.1-201ENST00000435333 538 ntTSL 3 BASIC7.22□□□□□ -1.25
TRIM55Q9BYV6 SS18L2P1-201ENST00000445923 213 ntBASIC7.22□□□□□ -1.25
TRIM55Q9BYV6 TRY2P-201ENST00000448860 689 ntBASIC7.22□□□□□ -1.25
TRIM55Q9BYV6 CCNB1IP1P3-201ENST00000454702 829 ntBASIC7.22□□□□□ -1.25
TRIM55Q9BYV6 RN7SL233P-201ENST00000469988 277 ntBASIC7.22□□□□□ -1.25
TRIM55Q9BYV6 RN7SL861P-201ENST00000473793 285 ntBASIC7.22□□□□□ -1.25
TRIM55Q9BYV6 AC131233.1-201ENST00000479200 955 ntBASIC7.22□□□□□ -1.25
TRIM55Q9BYV6 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
TRIM55Q9BYV6 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC7.22□□□□□ -1.25
TRIM55Q9BYV6 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC7.22□□□□□ -1.25
TRIM55Q9BYV6 AP002336.1-201ENST00000531426 422 ntTSL 2 BASIC7.22□□□□□ -1.25
TRIM55Q9BYV6 PRR13-204ENST00000547368 688 ntAPPRIS ALT2 TSL 3 BASIC7.22□□□□□ -1.25
TRIM55Q9BYV6 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC7.22□□□□□ -1.25
TRIM55Q9BYV6 MRPS36P5-201ENST00000551909 298 ntBASIC7.22□□□□□ -1.25
TRIM55Q9BYV6 AC011611.5-201ENST00000552477 578 ntBASIC7.22□□□□□ -1.25
TRIM55Q9BYV6 AL049870.4-201ENST00000555741 486 ntBASIC7.22□□□□□ -1.25
TRIM55Q9BYV6 LINC01146-203ENST00000555996 459 ntTSL 2 BASIC7.22□□□□□ -1.25
TRIM55Q9BYV6 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC7.22□□□□□ -1.25
TRIM55Q9BYV6 AC068831.6-201ENST00000560522 795 ntTSL 3 BASIC7.22□□□□□ -1.25
TRIM55Q9BYV6 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC7.22□□□□□ -1.25
TRIM55Q9BYV6 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC7.22□□□□□ -1.25
TRIM55Q9BYV6 AC025283.1-201ENST00000572039 734 ntBASIC7.22□□□□□ -1.25
TRIM55Q9BYV6 AC093074.1-201ENST00000590280 556 ntTSL 4 BASIC7.22□□□□□ -1.25
TRIM55Q9BYV6 RPS28P1-201ENST00000604589 187 ntBASIC7.22□□□□□ -1.25
TRIM55Q9BYV6 AC079610.2-201ENST00000604818 690 ntBASIC7.22□□□□□ -1.25
TRIM55Q9BYV6 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC7.22□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms