Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 MUM1L1-201ENST00000337685 4308 ntAPPRIS P1 TSL 3 BASIC8.21□□□□□ -1.09
TRAIPQ9BWF2 ZNF234-201ENST00000426739 4551 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
TRAIPQ9BWF2 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC8.21□□□□□ -1.09
TRAIPQ9BWF2 PLEKHS1-202ENST00000361048 3249 ntAPPRIS P3 TSL 2 BASIC8.21□□□□□ -1.09
TRAIPQ9BWF2 PLEKHS1-207ENST00000619563 3247 ntTSL 5 BASIC8.21□□□□□ -1.09
TRAIPQ9BWF2 MED21-201ENST00000282892 1753 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
TRAIPQ9BWF2 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
TRAIPQ9BWF2 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC8.21□□□□□ -1.1
TRAIPQ9BWF2 KIDINS220-201ENST00000256707 7361 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
TRAIPQ9BWF2 KIF4A-201ENST00000374403 4348 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
TRAIPQ9BWF2 TPPP2-201ENST00000321760 752 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
TRAIPQ9BWF2 CTSL3P-201ENST00000354530 657 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
TRAIPQ9BWF2 RGS8-202ENST00000367556 843 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
TRAIPQ9BWF2 S100B-203ENST00000397648 839 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
TRAIPQ9BWF2 AL079342.2-201ENST00000403367 482 ntBASIC8.21□□□□□ -1.1
TRAIPQ9BWF2 ELOCP9-201ENST00000418624 239 ntBASIC8.21□□□□□ -1.1
TRAIPQ9BWF2 LINC01687-203ENST00000420255 897 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
TRAIPQ9BWF2 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
TRAIPQ9BWF2 OR5AW1P-201ENST00000426334 1006 ntBASIC8.21□□□□□ -1.1
TRAIPQ9BWF2 CNOT7P1-201ENST00000429006 852 ntBASIC8.21□□□□□ -1.1
TRAIPQ9BWF2 AC244505.2-201ENST00000435089 759 ntBASIC8.21□□□□□ -1.1
TRAIPQ9BWF2 AC012485.2-201ENST00000437372 982 ntTSL 5 BASIC8.21□□□□□ -1.1
TRAIPQ9BWF2 AL008629.1-201ENST00000438615 184 ntBASIC8.21□□□□□ -1.1
TRAIPQ9BWF2 LIN28AP2-201ENST00000445283 458 ntBASIC8.21□□□□□ -1.1
TRAIPQ9BWF2 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC8.21□□□□□ -1.1
TRAIPQ9BWF2 AC013787.1-201ENST00000460165 307 ntBASIC8.21□□□□□ -1.1
TRAIPQ9BWF2 AC037198.2-201ENST00000478845 733 ntBASIC8.21□□□□□ -1.1
TRAIPQ9BWF2 AC021146.11-201ENST00000503319 491 ntBASIC8.21□□□□□ -1.1
TRAIPQ9BWF2 SMR3B-202ENST00000504825 489 ntAPPRIS P1 TSL 3 BASIC8.21□□□□□ -1.1
TRAIPQ9BWF2 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC8.21□□□□□ -1.1
TRAIPQ9BWF2 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC8.21□□□□□ -1.1
TRAIPQ9BWF2 Y_RNA.688-201ENST00000516565 95 ntBASIC8.21□□□□□ -1.1
TRAIPQ9BWF2 MTCO1P47-201ENST00000523889 1271 ntBASIC8.21□□□□□ -1.1
TRAIPQ9BWF2 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC8.21□□□□□ -1.1
TRAIPQ9BWF2 OR4A2P-201ENST00000527276 913 ntBASIC8.21□□□□□ -1.1
TRAIPQ9BWF2 AP000873.2-209ENST00000528083 547 ntTSL 4 BASIC8.21□□□□□ -1.1
TRAIPQ9BWF2 AP002336.1-201ENST00000531426 422 ntTSL 2 BASIC8.21□□□□□ -1.1
TRAIPQ9BWF2 SMCO2-203ENST00000535986 1096 ntAPPRIS P2 TSL 5 BASIC8.21□□□□□ -1.1
TRAIPQ9BWF2 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC8.21□□□□□ -1.1
TRAIPQ9BWF2 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC8.21□□□□□ -1.1
TRAIPQ9BWF2 AC078860.1-201ENST00000546601 527 ntTSL 2 BASIC8.21□□□□□ -1.1
TRAIPQ9BWF2 AL358334.3-201ENST00000557343 535 ntTSL 3 BASIC8.21□□□□□ -1.1
TRAIPQ9BWF2 AC007950.1-201ENST00000560465 615 ntTSL 3 BASIC8.21□□□□□ -1.1
TRAIPQ9BWF2 AC122134.1-201ENST00000565664 1104 ntBASIC8.21□□□□□ -1.1
TRAIPQ9BWF2 AC040162.2-201ENST00000573092 157 ntBASIC8.21□□□□□ -1.1
TRAIPQ9BWF2 AC024614.1-201ENST00000577546 307 ntBASIC8.21□□□□□ -1.1
TRAIPQ9BWF2 RN7SL835P-201ENST00000579920 262 ntBASIC8.21□□□□□ -1.1
TRAIPQ9BWF2 ZEB2-AS1-206ENST00000602006 572 ntTSL 5 BASIC8.21□□□□□ -1.1
TRAIPQ9BWF2 AC125494.2-201ENST00000602431 657 ntBASIC8.21□□□□□ -1.1
TRAIPQ9BWF2 MIR205HG-210ENST00000603283 455 ntTSL 3 BASIC8.21□□□□□ -1.1
TRAIPQ9BWF2 BNIP3P4-201ENST00000604946 565 ntBASIC8.21□□□□□ -1.1
TRAIPQ9BWF2 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
TRAIPQ9BWF2 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
TRAIPQ9BWF2 AC011525.1-201ENST00000562167 5676 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
TRAIPQ9BWF2 BICC1-202ENST00000373886 5475 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
TRAIPQ9BWF2 KPNA6-201ENST00000373625 7378 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
TRAIPQ9BWF2 RASGRP3-202ENST00000403687 4807 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.1
TRAIPQ9BWF2 CDY1-202ENST00000361963 2177 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
TRAIPQ9BWF2 MTND5P31-201ENST00000419366 1374 ntBASIC8.21□□□□□ -1.1
TRAIPQ9BWF2 ZNFX1-202ENST00000371752 7212 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
TRAIPQ9BWF2 PLEKHA5-201ENST00000299275 4238 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.1
TRAIPQ9BWF2 AMBN-203ENST00000613447 1997 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.1
TRAIPQ9BWF2 PRKAR2A-AS1-202ENST00000416209 3447 ntTSL 2 BASIC8.2□□□□□ -1.1
TRAIPQ9BWF2 MGAT4A-202ENST00000393487 8382 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
TRAIPQ9BWF2 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
TRAIPQ9BWF2 NBPF12-203ENST00000611443 5594 ntTSL 5 BASIC8.2□□□□□ -1.1
TRAIPQ9BWF2 MLLT3-203ENST00000380338 6772 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
TRAIPQ9BWF2 NASP-203ENST00000372052 1458 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
TRAIPQ9BWF2 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
TRAIPQ9BWF2 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
TRAIPQ9BWF2 OR6J1-201ENST00000540461 4165 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
TRAIPQ9BWF2 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC8.2□□□□□ -1.1
TRAIPQ9BWF2 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC8.2□□□□□ -1.1
TRAIPQ9BWF2 OR2AH1P-202ENST00000641232 2744 ntBASIC8.2□□□□□ -1.1
TRAIPQ9BWF2 MPPED2-201ENST00000358117 2405 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
TRAIPQ9BWF2 Z99129.4-201ENST00000624649 2435 ntBASIC8.2□□□□□ -1.1
TRAIPQ9BWF2 LINC01829-202ENST00000433133 2100 ntTSL 2 BASIC8.2□□□□□ -1.1
TRAIPQ9BWF2 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC8.2□□□□□ -1.1
TRAIPQ9BWF2 F13A1-201ENST00000264870 3999 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
TRAIPQ9BWF2 ST18-201ENST00000276480 6187 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
TRAIPQ9BWF2 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
TRAIPQ9BWF2 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
TRAIPQ9BWF2 CDKL5-201ENST00000379989 3463 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
TRAIPQ9BWF2 CRBN-203ENST00000432408 2203 ntAPPRIS ALT1 TSL 1 (best) BASIC8.2□□□□□ -1.1
TRAIPQ9BWF2 RBMX2P2-201ENST00000257020 946 ntBASIC8.2□□□□□ -1.1
TRAIPQ9BWF2 FAM133CP-201ENST00000332869 704 ntBASIC8.2□□□□□ -1.1
TRAIPQ9BWF2 HYPM-201ENST00000341016 501 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
TRAIPQ9BWF2 SFR1P1-201ENST00000403720 688 ntBASIC8.2□□□□□ -1.1
TRAIPQ9BWF2 AL139135.1-201ENST00000412675 209 ntBASIC8.2□□□□□ -1.1
TRAIPQ9BWF2 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC8.2□□□□□ -1.1
TRAIPQ9BWF2 AC097468.2-201ENST00000429343 553 ntTSL 4 BASIC8.2□□□□□ -1.1
TRAIPQ9BWF2 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC8.2□□□□□ -1.1
TRAIPQ9BWF2 WWC3-AS1-201ENST00000430057 578 ntTSL 3 BASIC8.2□□□□□ -1.1
TRAIPQ9BWF2 MOB1AP1-201ENST00000430903 535 ntBASIC8.2□□□□□ -1.1
TRAIPQ9BWF2 AC092473.1-201ENST00000441098 221 ntBASIC8.2□□□□□ -1.1
TRAIPQ9BWF2 LINC01525-201ENST00000442182 511 ntTSL 2 BASIC8.2□□□□□ -1.1
TRAIPQ9BWF2 GHRL-210ENST00000449238 440 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
TRAIPQ9BWF2 FTH1P7-201ENST00000450676 552 ntBASIC8.2□□□□□ -1.1
TRAIPQ9BWF2 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC8.2□□□□□ -1.1
TRAIPQ9BWF2 AL928654.1-201ENST00000476081 354 ntBASIC8.2□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms