Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC7.84□□□□□ -1.15
CHMP4CQ96CF2 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
CHMP4CQ96CF2 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
CHMP4CQ96CF2 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC7.84□□□□□ -1.15
CHMP4CQ96CF2 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
CHMP4CQ96CF2 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC7.83□□□□□ -1.16
CHMP4CQ96CF2 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
CHMP4CQ96CF2 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC7.83□□□□□ -1.16
CHMP4CQ96CF2 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
CHMP4CQ96CF2 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC7.83□□□□□ -1.16
CHMP4CQ96CF2 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
CHMP4CQ96CF2 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
CHMP4CQ96CF2 AL359694.2-201ENST00000567753 1615 ntBASIC7.83□□□□□ -1.16
CHMP4CQ96CF2 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC7.83□□□□□ -1.16
CHMP4CQ96CF2 STAG3L4-201ENST00000352103 530 ntBASIC7.83□□□□□ -1.16
CHMP4CQ96CF2 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC7.83□□□□□ -1.16
CHMP4CQ96CF2 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC7.83□□□□□ -1.16
CHMP4CQ96CF2 AC007064.3-201ENST00000422608 359 ntBASIC7.83□□□□□ -1.16
CHMP4CQ96CF2 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC7.83□□□□□ -1.16
CHMP4CQ96CF2 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC7.83□□□□□ -1.16
CHMP4CQ96CF2 AC128677.1-201ENST00000436016 442 ntBASIC7.83□□□□□ -1.16
CHMP4CQ96CF2 RPL26P30-201ENST00000453533 435 ntBASIC7.83□□□□□ -1.16
CHMP4CQ96CF2 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC7.83□□□□□ -1.16
CHMP4CQ96CF2 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC7.83□□□□□ -1.16
CHMP4CQ96CF2 OR51A1P-201ENST00000511110 946 ntBASIC7.83□□□□□ -1.16
CHMP4CQ96CF2 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC7.83□□□□□ -1.16
CHMP4CQ96CF2 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC7.83□□□□□ -1.16
CHMP4CQ96CF2 AC023245.2-201ENST00000530760 2978 ntBASIC7.83□□□□□ -1.16
CHMP4CQ96CF2 OR52K3P-201ENST00000531655 943 ntBASIC7.83□□□□□ -1.16
CHMP4CQ96CF2 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
CHMP4CQ96CF2 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC7.83□□□□□ -1.16
CHMP4CQ96CF2 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC7.83□□□□□ -1.16
CHMP4CQ96CF2 AL162632.2-201ENST00000553933 399 ntBASIC7.83□□□□□ -1.16
CHMP4CQ96CF2 AL445383.1-201ENST00000554689 874 ntBASIC7.83□□□□□ -1.16
CHMP4CQ96CF2 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC7.83□□□□□ -1.16
CHMP4CQ96CF2 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC7.83□□□□□ -1.16
CHMP4CQ96CF2 AL731537.2-201ENST00000561565 951 ntBASIC7.83□□□□□ -1.16
CHMP4CQ96CF2 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC7.83□□□□□ -1.16
CHMP4CQ96CF2 AC018558.5-201ENST00000565840 952 ntBASIC7.83□□□□□ -1.16
CHMP4CQ96CF2 NPM1P45-201ENST00000583151 559 ntBASIC7.83□□□□□ -1.16
CHMP4CQ96CF2 WBP1LP12-201ENST00000604449 331 ntBASIC7.83□□□□□ -1.16
CHMP4CQ96CF2 AC091193.1-201ENST00000604640 448 ntBASIC7.83□□□□□ -1.16
CHMP4CQ96CF2 AC005828.7-201ENST00000607331 556 ntBASIC7.83□□□□□ -1.16
CHMP4CQ96CF2 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
CHMP4CQ96CF2 AL356094.1-201ENST00000624663 1212 ntBASIC7.83□□□□□ -1.16
CHMP4CQ96CF2 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC7.83□□□□□ -1.16
CHMP4CQ96CF2 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC7.83□□□□□ -1.16
CHMP4CQ96CF2 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
CHMP4CQ96CF2 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC7.83□□□□□ -1.16
CHMP4CQ96CF2 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC7.83□□□□□ -1.16
CHMP4CQ96CF2 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
CHMP4CQ96CF2 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
CHMP4CQ96CF2 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
CHMP4CQ96CF2 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
CHMP4CQ96CF2 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
CHMP4CQ96CF2 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC7.82□□□□□ -1.16
CHMP4CQ96CF2 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
CHMP4CQ96CF2 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
CHMP4CQ96CF2 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
CHMP4CQ96CF2 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
CHMP4CQ96CF2 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
CHMP4CQ96CF2 PPIAP24-201ENST00000328558 471 ntBASIC7.82□□□□□ -1.16
CHMP4CQ96CF2 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC7.82□□□□□ -1.16
CHMP4CQ96CF2 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC7.82□□□□□ -1.16
CHMP4CQ96CF2 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC7.82□□□□□ -1.16
CHMP4CQ96CF2 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC7.82□□□□□ -1.16
CHMP4CQ96CF2 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC7.82□□□□□ -1.16
CHMP4CQ96CF2 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
CHMP4CQ96CF2 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC7.82□□□□□ -1.16
CHMP4CQ96CF2 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC7.82□□□□□ -1.16
CHMP4CQ96CF2 RPS7P11-201ENST00000484240 586 ntBASIC7.82□□□□□ -1.16
CHMP4CQ96CF2 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC7.82□□□□□ -1.16
CHMP4CQ96CF2 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC7.82□□□□□ -1.16
CHMP4CQ96CF2 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
CHMP4CQ96CF2 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
CHMP4CQ96CF2 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC7.82□□□□□ -1.16
CHMP4CQ96CF2 AC011603.2-202ENST00000552893 504 ntTSL 3 BASIC7.82□□□□□ -1.16
CHMP4CQ96CF2 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC7.82□□□□□ -1.16
CHMP4CQ96CF2 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC7.82□□□□□ -1.16
CHMP4CQ96CF2 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC7.82□□□□□ -1.16
CHMP4CQ96CF2 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
CHMP4CQ96CF2 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC7.82□□□□□ -1.16
CHMP4CQ96CF2 VN1R81P-201ENST00000602085 372 ntBASIC7.82□□□□□ -1.16
CHMP4CQ96CF2 AL078623.1-201ENST00000602702 907 ntBASIC7.82□□□□□ -1.16
CHMP4CQ96CF2 NDUFB9P1-201ENST00000604683 510 ntBASIC7.82□□□□□ -1.16
CHMP4CQ96CF2 AL352984.2-201ENST00000611153 546 ntBASIC7.82□□□□□ -1.16
CHMP4CQ96CF2 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
CHMP4CQ96CF2 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC7.82□□□□□ -1.16
CHMP4CQ96CF2 AC089999.3-201ENST00000622440 577 ntBASIC7.82□□□□□ -1.16
CHMP4CQ96CF2 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
CHMP4CQ96CF2 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
CHMP4CQ96CF2 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC7.82□□□□□ -1.16
CHMP4CQ96CF2 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC7.82□□□□□ -1.16
CHMP4CQ96CF2 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
CHMP4CQ96CF2 AC010624.4-201ENST00000597606 1351 ntBASIC7.82□□□□□ -1.16
CHMP4CQ96CF2 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC7.82□□□□□ -1.16
CHMP4CQ96CF2 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC7.82□□□□□ -1.16
CHMP4CQ96CF2 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC7.82□□□□□ -1.16
CHMP4CQ96CF2 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC7.82□□□□□ -1.16
CHMP4CQ96CF2 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 12.8 ms