Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC8.46□□□□□ -1.06
HLA-CQ95604 CLUHP1-201ENST00000435012 1190 ntBASIC8.46□□□□□ -1.06
HLA-CQ95604 IGKV6D-21-201ENST00000436451 409 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
HLA-CQ95604 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC8.46□□□□□ -1.06
HLA-CQ95604 AC005840.2-201ENST00000447193 355 ntBASIC8.46□□□□□ -1.06
HLA-CQ95604 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
HLA-CQ95604 AL591379.2-201ENST00000450223 397 ntBASIC8.46□□□□□ -1.06
HLA-CQ95604 AL161937.1-202ENST00000451960 341 ntTSL 3 BASIC8.46□□□□□ -1.06
HLA-CQ95604 DOCK8-205ENST00000453981 7237 ntTSL 5 BASIC8.46□□□□□ -1.06
HLA-CQ95604 RAD23BP3-201ENST00000454157 1152 ntBASIC8.46□□□□□ -1.06
HLA-CQ95604 AC009955.1-201ENST00000455896 271 ntTSL 5 BASIC8.46□□□□□ -1.06
HLA-CQ95604 AL133480.2-201ENST00000456723 487 ntBASIC8.46□□□□□ -1.06
HLA-CQ95604 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC8.46□□□□□ -1.06
HLA-CQ95604 PMCHL2-203ENST00000457791 237 ntBASIC8.46□□□□□ -1.06
HLA-CQ95604 RPL30P9-201ENST00000465586 330 ntBASIC8.46□□□□□ -1.06
HLA-CQ95604 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC8.46□□□□□ -1.06
HLA-CQ95604 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC8.46□□□□□ -1.06
HLA-CQ95604 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC8.46□□□□□ -1.06
HLA-CQ95604 PAICSP4-201ENST00000517543 1253 ntBASIC8.46□□□□□ -1.06
HLA-CQ95604 MTCO2P4-201ENST00000517968 247 ntBASIC8.46□□□□□ -1.06
HLA-CQ95604 FBXO16-208ENST00000519471 398 ntTSL 2 BASIC8.46□□□□□ -1.06
HLA-CQ95604 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC8.46□□□□□ -1.06
HLA-CQ95604 FAM92A1P1-201ENST00000528023 890 ntBASIC8.46□□□□□ -1.06
HLA-CQ95604 PHBP2-201ENST00000532859 806 ntBASIC8.46□□□□□ -1.06
HLA-CQ95604 AP001257.1-201ENST00000533106 385 ntTSL 3 BASIC8.46□□□□□ -1.06
HLA-CQ95604 DCN-209ENST00000546745 1026 ntTSL 3 BASIC8.46□□□□□ -1.06
HLA-CQ95604 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC8.46□□□□□ -1.06
HLA-CQ95604 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC8.46□□□□□ -1.06
HLA-CQ95604 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
HLA-CQ95604 AC012146.2-201ENST00000576545 416 ntBASIC8.46□□□□□ -1.06
HLA-CQ95604 AC013553.2-201ENST00000604244 589 ntBASIC8.46□□□□□ -1.06
HLA-CQ95604 AC024085.1-201ENST00000604299 432 ntBASIC8.46□□□□□ -1.06
HLA-CQ95604 RPS28P1-201ENST00000604589 187 ntBASIC8.46□□□□□ -1.06
HLA-CQ95604 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC8.46□□□□□ -1.06
HLA-CQ95604 AC098614.4-201ENST00000607601 462 ntBASIC8.46□□□□□ -1.06
HLA-CQ95604 AC069499.2-201ENST00000610665 382 ntBASIC8.46□□□□□ -1.06
HLA-CQ95604 RASSF3-206ENST00000637125 1060 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
HLA-CQ95604 AC112487.2-201ENST00000637950 304 ntBASIC8.46□□□□□ -1.06
HLA-CQ95604 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC8.46□□□□□ -1.06
HLA-CQ95604 AL121936.2-201ENST00000641935 662 ntBASIC8.46□□□□□ -1.06
HLA-CQ95604 SPP1-201ENST00000237623 1581 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.06
HLA-CQ95604 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
HLA-CQ95604 AOX1-202ENST00000374700 5074 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
HLA-CQ95604 ZNF790-208ENST00000615484 2451 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
HLA-CQ95604 PCDH15-233ENST00000621708 5700 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.06
HLA-CQ95604 PSMC1P7-201ENST00000495689 1315 ntBASIC8.46□□□□□ -1.06
HLA-CQ95604 DCLRE1C-203ENST00000378242 1933 ntTSL 2 BASIC8.46□□□□□ -1.06
HLA-CQ95604 DCN-220ENST00000552962 1930 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
HLA-CQ95604 AEBP2-202ENST00000360995 2533 ntAPPRIS ALT2 TSL 2 BASIC8.46□□□□□ -1.06
HLA-CQ95604 LOXHD1-212ENST00000582408 3755 ntTSL 2 BASIC8.46□□□□□ -1.06
HLA-CQ95604 PBRM1-206ENST00000409114 5015 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
HLA-CQ95604 FCGR2A-202ENST00000367972 1399 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.06
HLA-CQ95604 CTDSPL-201ENST00000273179 4459 ntAPPRIS P4 TSL 1 (best) BASIC8.46□□□□□ -1.06
HLA-CQ95604 FAM217B-201ENST00000358293 5152 ntAPPRIS P2 TSL 2 BASIC8.46□□□□□ -1.06
HLA-CQ95604 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
HLA-CQ95604 EIF4G2-202ENST00000396525 3346 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.06
HLA-CQ95604 PSG9-205ENST00000443718 1421 ntTSL 2 BASIC8.46□□□□□ -1.06
HLA-CQ95604 SPATA13-204ENST00000399949 3026 ntAPPRIS ALT2 TSL 2 BASIC8.46□□□□□ -1.06
HLA-CQ95604 FABP7-201ENST00000356535 2086 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
HLA-CQ95604 C2orf91-201ENST00000378711 3721 ntAPPRIS P2 TSL 2 BASIC8.45□□□□□ -1.06
HLA-CQ95604 ARHGAP5-204ENST00000432921 5003 ntTSL 5 BASIC8.45□□□□□ -1.06
HLA-CQ95604 ZNF233-201ENST00000391958 2784 ntAPPRIS P1 TSL 2 BASIC8.45□□□□□ -1.06
HLA-CQ95604 COG2-201ENST00000366668 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC8.45□□□□□ -1.06
HLA-CQ95604 VPS13D-212ENST00000543766 3838 ntTSL 2 BASIC8.45□□□□□ -1.06
HLA-CQ95604 LRP4-AS1-201ENST00000502049 1504 ntTSL 2 BASIC8.45□□□□□ -1.06
HLA-CQ95604 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
HLA-CQ95604 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC8.45□□□□□ -1.06
HLA-CQ95604 SELENOP-203ENST00000506577 2204 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
HLA-CQ95604 WRAP53-201ENST00000316024 4011 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
HLA-CQ95604 TESK2-201ENST00000372084 2600 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
HLA-CQ95604 THADA-202ENST00000402360 2974 ntTSL 5 BASIC8.45□□□□□ -1.06
HLA-CQ95604 MKL2-207ENST00000573051 1938 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
HLA-CQ95604 ITSN2-213ENST00000622089 5805 ntTSL 5 BASIC8.45□□□□□ -1.06
HLA-CQ95604 FREM1-204ENST00000422223 10086 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
HLA-CQ95604 FLNB-AS1-202ENST00000488720 3709 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
HLA-CQ95604 CASC15-203ENST00000605917 4461 ntBASIC8.45□□□□□ -1.06
HLA-CQ95604 CCR1-201ENST00000296140 2731 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
HLA-CQ95604 OSBPL3-202ENST00000396429 2707 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
HLA-CQ95604 ENSA-207ENST00000362052 703 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
HLA-CQ95604 Y_RNA.279-201ENST00000364763 95 ntBASIC8.45□□□□□ -1.06
HLA-CQ95604 SNORD15A-201ENST00000384214 148 ntBASIC8.45□□□□□ -1.06
HLA-CQ95604 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
HLA-CQ95604 OR7E101P-201ENST00000400428 513 ntBASIC8.45□□□□□ -1.06
HLA-CQ95604 AL136981.1-201ENST00000411450 549 ntTSL 4 BASIC8.45□□□□□ -1.06
HLA-CQ95604 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC8.45□□□□□ -1.06
HLA-CQ95604 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC8.45□□□□□ -1.06
HLA-CQ95604 LINC01704-201ENST00000414848 834 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
HLA-CQ95604 PPIAP23-201ENST00000420099 497 ntBASIC8.45□□□□□ -1.06
HLA-CQ95604 Z68868.1-201ENST00000429048 544 ntBASIC8.45□□□□□ -1.06
HLA-CQ95604 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC8.45□□□□□ -1.06
HLA-CQ95604 MTAPP2-201ENST00000437063 832 ntBASIC8.45□□□□□ -1.06
HLA-CQ95604 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC8.45□□□□□ -1.06
HLA-CQ95604 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC8.45□□□□□ -1.06
HLA-CQ95604 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC8.45□□□□□ -1.06
HLA-CQ95604 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC8.45□□□□□ -1.06
HLA-CQ95604 AC104108.1-201ENST00000509930 412 ntBASIC8.45□□□□□ -1.06
HLA-CQ95604 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC8.45□□□□□ -1.06
HLA-CQ95604 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC8.45□□□□□ -1.06
HLA-CQ95604 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC8.45□□□□□ -1.06
HLA-CQ95604 AC084026.2-201ENST00000521101 642 ntTSL 3 BASIC8.45□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms