Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 AC253576.1-201ENST00000511645 1156 ntBASIC10.12□□□□□ -0.79
TOPBP1Q92547 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC10.12□□□□□ -0.79
TOPBP1Q92547 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC10.12□□□□□ -0.79
TOPBP1Q92547 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC10.12□□□□□ -0.79
TOPBP1Q92547 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC10.12□□□□□ -0.79
TOPBP1Q92547 AL512329.2-201ENST00000607350 548 ntBASIC10.12□□□□□ -0.79
TOPBP1Q92547 RPSAP73-201ENST00000614820 330 ntBASIC10.12□□□□□ -0.79
TOPBP1Q92547 CASC19-264ENST00000641912 1184 ntBASIC10.12□□□□□ -0.79
TOPBP1Q92547 MRRF-202ENST00000344641 9826 ntAPPRIS P1 TSL 2 BASIC10.12□□□□□ -0.79
TOPBP1Q92547 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
TOPBP1Q92547 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC10.12□□□□□ -0.79
TOPBP1Q92547 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC10.12□□□□□ -0.79
TOPBP1Q92547 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC10.12□□□□□ -0.79
TOPBP1Q92547 RRP8-201ENST00000254605 6560 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
TOPBP1Q92547 PCBP2-206ENST00000455667 2741 ntAPPRIS ALT1 TSL 1 (best) BASIC10.12□□□□□ -0.79
TOPBP1Q92547 AL592429.1-201ENST00000403909 1473 ntBASIC10.12□□□□□ -0.79
TOPBP1Q92547 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC10.12□□□□□ -0.79
TOPBP1Q92547 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
TOPBP1Q92547 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
TOPBP1Q92547 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC10.12□□□□□ -0.79
TOPBP1Q92547 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC10.12□□□□□ -0.79
TOPBP1Q92547 RNU11-6P-201ENST00000391127 133 ntBASIC10.12□□□□□ -0.79
TOPBP1Q92547 AL133270.1-201ENST00000402635 279 ntBASIC10.12□□□□□ -0.79
TOPBP1Q92547 UBE2V1P14-201ENST00000415815 558 ntBASIC10.12□□□□□ -0.79
TOPBP1Q92547 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC10.12□□□□□ -0.79
TOPBP1Q92547 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC10.12□□□□□ -0.79
TOPBP1Q92547 AL022331.1-201ENST00000429025 477 ntBASIC10.12□□□□□ -0.79
TOPBP1Q92547 AC022215.1-201ENST00000481770 362 ntBASIC10.12□□□□□ -0.79
TOPBP1Q92547 RPS3AP15-201ENST00000483874 781 ntBASIC10.12□□□□□ -0.79
TOPBP1Q92547 IGBP1P1-201ENST00000554337 1009 ntBASIC10.12□□□□□ -0.79
TOPBP1Q92547 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC10.12□□□□□ -0.79
TOPBP1Q92547 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC10.12□□□□□ -0.79
TOPBP1Q92547 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC10.12□□□□□ -0.79
TOPBP1Q92547 AC116631.1-202ENST00000640984 683 ntBASIC10.12□□□□□ -0.79
TOPBP1Q92547 PSD3-220ENST00000615573 5843 ntTSL 5 BASIC10.12□□□□□ -0.79
TOPBP1Q92547 DOCK8-205ENST00000453981 7237 ntTSL 5 BASIC10.12□□□□□ -0.79
TOPBP1Q92547 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC10.12□□□□□ -0.79
TOPBP1Q92547 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC10.11□□□□□ -0.79
TOPBP1Q92547 LARS-212ENST00000510191 3737 ntTSL 2 BASIC10.11□□□□□ -0.79
TOPBP1Q92547 GUCY1A2-203ENST00000526355 16205 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
TOPBP1Q92547 SPATS2L-227ENST00000619961 6115 ntTSL 2 BASIC10.11□□□□□ -0.79
TOPBP1Q92547 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
TOPBP1Q92547 KAT6B-205ENST00000372725 6944 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
TOPBP1Q92547 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
TOPBP1Q92547 HDAC1P2-201ENST00000453661 1398 ntBASIC10.11□□□□□ -0.79
TOPBP1Q92547 LNPK-201ENST00000272748 7610 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
TOPBP1Q92547 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
TOPBP1Q92547 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
TOPBP1Q92547 MFSD8-218ENST00000641186 4448 ntBASIC10.11□□□□□ -0.79
TOPBP1Q92547 SNRPEP6-201ENST00000407465 277 ntBASIC10.11□□□□□ -0.79
TOPBP1Q92547 HMGB3P24-201ENST00000433260 622 ntBASIC10.11□□□□□ -0.79
TOPBP1Q92547 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC10.11□□□□□ -0.79
TOPBP1Q92547 RPL35AP28-201ENST00000459730 331 ntBASIC10.11□□□□□ -0.79
TOPBP1Q92547 AC104164.1-201ENST00000460282 590 ntBASIC10.11□□□□□ -0.79
TOPBP1Q92547 AL157777.1-201ENST00000468100 304 ntBASIC10.11□□□□□ -0.79
TOPBP1Q92547 AL355032.1-201ENST00000472981 438 ntBASIC10.11□□□□□ -0.79
TOPBP1Q92547 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC10.11□□□□□ -0.79
TOPBP1Q92547 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC10.11□□□□□ -0.79
TOPBP1Q92547 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
TOPBP1Q92547 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC10.11□□□□□ -0.79
TOPBP1Q92547 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC10.11□□□□□ -0.79
TOPBP1Q92547 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
TOPBP1Q92547 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
TOPBP1Q92547 MIR8080-201ENST00000622224 89 ntBASIC10.11□□□□□ -0.79
TOPBP1Q92547 AC007683.2-201ENST00000624681 714 ntBASIC10.11□□□□□ -0.79
TOPBP1Q92547 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
TOPBP1Q92547 CREB3L2-201ENST00000330387 7412 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
TOPBP1Q92547 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
TOPBP1Q92547 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC10.11□□□□□ -0.79
TOPBP1Q92547 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC10.1□□□□□ -0.79
TOPBP1Q92547 SLC23A2-201ENST00000338244 6944 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
TOPBP1Q92547 GTF2E1-201ENST00000283875 3012 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
TOPBP1Q92547 SLC25A24-202ENST00000370041 3404 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
TOPBP1Q92547 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
TOPBP1Q92547 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
TOPBP1Q92547 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
TOPBP1Q92547 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
TOPBP1Q92547 DDX46-201ENST00000354283 3821 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
TOPBP1Q92547 RN7SKP29-201ENST00000410957 272 ntBASIC10.1□□□□□ -0.79
TOPBP1Q92547 CYP4F30P-202ENST00000420048 405 ntBASIC10.1□□□□□ -0.79
TOPBP1Q92547 AC113412.1-201ENST00000425840 504 ntBASIC10.1□□□□□ -0.79
TOPBP1Q92547 FABP7P2-201ENST00000429946 379 ntBASIC10.1□□□□□ -0.79
TOPBP1Q92547 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC10.1□□□□□ -0.79
TOPBP1Q92547 RANP1-206ENST00000455094 651 ntBASIC10.1□□□□□ -0.79
TOPBP1Q92547 MRPS16P1-201ENST00000523462 412 ntBASIC10.1□□□□□ -0.79
TOPBP1Q92547 HMGB1P42-201ENST00000532126 553 ntBASIC10.1□□□□□ -0.79
TOPBP1Q92547 AC015818.6-201ENST00000584274 634 ntBASIC10.1□□□□□ -0.79
TOPBP1Q92547 AC139493.1-201ENST00000604368 397 ntBASIC10.1□□□□□ -0.79
TOPBP1Q92547 AL139407.1-201ENST00000613826 1175 ntBASIC10.1□□□□□ -0.79
TOPBP1Q92547 AL445649.1-201ENST00000615941 691 ntBASIC10.1□□□□□ -0.79
TOPBP1Q92547 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC10.1□□□□□ -0.79
TOPBP1Q92547 AC087269.2-201ENST00000641764 975 ntBASIC10.1□□□□□ -0.79
TOPBP1Q92547 AP2B1-217ENST00000618940 3415 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
TOPBP1Q92547 STAB2-201ENST00000388887 8251 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
TOPBP1Q92547 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC10.1□□□□□ -0.79
TOPBP1Q92547 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
TOPBP1Q92547 SYNPO2-203ENST00000434046 3588 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
TOPBP1Q92547 PPWD1-201ENST00000261308 2166 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
TOPBP1Q92547 NSD2-208ENST00000420906 5109 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
TOPBP1Q92547 CREM-217ENST00000439705 2306 ntTSL 5 BASIC10.1□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 157.6 ms