Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 MAP4K4-219ENST00000625522 7458 ntAPPRIS P5 TSL 5 BASIC7.53□□□□□ -1.2
SNED1Q8TER0 FAM186A-201ENST00000327337 7127 ntAPPRIS P2 TSL 5 BASIC7.53□□□□□ -1.2
SNED1Q8TER0 AP003119.3-201ENST00000566747 4192 ntBASIC7.53□□□□□ -1.2
SNED1Q8TER0 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
SNED1Q8TER0 OR11H13P-201ENST00000359695 979 ntBASIC7.52□□□□□ -1.2
SNED1Q8TER0 RN7SKP160-201ENST00000363804 340 ntBASIC7.52□□□□□ -1.2
SNED1Q8TER0 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC7.52□□□□□ -1.2
SNED1Q8TER0 SSR1P1-201ENST00000407630 814 ntBASIC7.52□□□□□ -1.2
SNED1Q8TER0 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC7.52□□□□□ -1.2
SNED1Q8TER0 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC7.52□□□□□ -1.2
SNED1Q8TER0 EIF4A1P6-201ENST00000448133 1210 ntBASIC7.52□□□□□ -1.2
SNED1Q8TER0 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC7.52□□□□□ -1.2
SNED1Q8TER0 IGKV2-18-201ENST00000522607 343 ntBASIC7.52□□□□□ -1.2
SNED1Q8TER0 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC7.52□□□□□ -1.2
SNED1Q8TER0 AC009120.3-201ENST00000563335 499 ntBASIC7.52□□□□□ -1.2
SNED1Q8TER0 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC7.52□□□□□ -1.2
SNED1Q8TER0 MIR4776-2-201ENST00000580204 80 ntBASIC7.52□□□□□ -1.2
SNED1Q8TER0 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC7.52□□□□□ -1.2
SNED1Q8TER0 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC7.52□□□□□ -1.2
SNED1Q8TER0 AC139493.1-201ENST00000604368 397 ntBASIC7.52□□□□□ -1.2
SNED1Q8TER0 AL645933.2-201ENST00000606743 1207 ntBASIC7.52□□□□□ -1.2
SNED1Q8TER0 OR8G3P-202ENST00000641572 1255 ntBASIC7.52□□□□□ -1.2
SNED1Q8TER0 POLH-201ENST00000372226 3322 ntTSL 1 (best) BASIC7.52□□□□□ -1.2
SNED1Q8TER0 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC7.52□□□□□ -1.2
SNED1Q8TER0 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
SNED1Q8TER0 RTTN-222ENST00000640769 8088 ntAPPRIS P1 TSL 2 BASIC7.52□□□□□ -1.21
SNED1Q8TER0 POGK-201ENST00000367875 6254 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
SNED1Q8TER0 MAS1-201ENST00000252660 9841 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
SNED1Q8TER0 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
SNED1Q8TER0 HMCN2-206ENST00000624552 15610 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
SNED1Q8TER0 AL136531.3-201ENST00000624378 3658 ntBASIC7.52□□□□□ -1.21
SNED1Q8TER0 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC7.52□□□□□ -1.21
SNED1Q8TER0 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
SNED1Q8TER0 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC7.52□□□□□ -1.21
SNED1Q8TER0 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
SNED1Q8TER0 OR7D2-201ENST00000344248 3224 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
SNED1Q8TER0 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC7.52□□□□□ -1.21
SNED1Q8TER0 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC7.52□□□□□ -1.21
SNED1Q8TER0 SH3D19-203ENST00000409598 5284 ntAPPRIS ALT1 TSL 1 (best) BASIC7.52□□□□□ -1.21
SNED1Q8TER0 DTHD1-201ENST00000357504 3203 ntTSL 2 BASIC7.52□□□□□ -1.21
SNED1Q8TER0 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
SNED1Q8TER0 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
SNED1Q8TER0 AC235565.1-201ENST00000456962 1325 ntBASIC7.52□□□□□ -1.21
SNED1Q8TER0 MIR375-201ENST00000362103 64 ntBASIC7.52□□□□□ -1.21
SNED1Q8TER0 AL445238.1-204ENST00000400311 463 ntBASIC7.52□□□□□ -1.21
SNED1Q8TER0 BMS1P17-202ENST00000416720 316 ntBASIC7.52□□□□□ -1.21
SNED1Q8TER0 AC073909.1-201ENST00000447112 999 ntBASIC7.52□□□□□ -1.21
SNED1Q8TER0 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC7.52□□□□□ -1.21
SNED1Q8TER0 AC011225.1-201ENST00000457751 369 ntBASIC7.52□□□□□ -1.21
SNED1Q8TER0 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC7.52□□□□□ -1.21
SNED1Q8TER0 RN7SL727P-201ENST00000482164 296 ntBASIC7.52□□□□□ -1.21
SNED1Q8TER0 AC084337.1-201ENST00000524809 686 ntBASIC7.52□□□□□ -1.21
SNED1Q8TER0 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC7.52□□□□□ -1.21
SNED1Q8TER0 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
SNED1Q8TER0 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC7.52□□□□□ -1.21
SNED1Q8TER0 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC7.52□□□□□ -1.21
SNED1Q8TER0 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC7.52□□□□□ -1.21
SNED1Q8TER0 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC7.52□□□□□ -1.21
SNED1Q8TER0 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC7.52□□□□□ -1.21
SNED1Q8TER0 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC7.52□□□□□ -1.21
SNED1Q8TER0 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC7.52□□□□□ -1.21
SNED1Q8TER0 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC7.52□□□□□ -1.21
SNED1Q8TER0 AL589674.2-201ENST00000604304 337 ntBASIC7.52□□□□□ -1.21
SNED1Q8TER0 AC130448.2-201ENST00000624082 374 ntBASIC7.52□□□□□ -1.21
SNED1Q8TER0 TLN2-209ENST00000561311 11880 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
SNED1Q8TER0 SPOCK1-201ENST00000282223 4488 ntTSL 5 BASIC7.52□□□□□ -1.21
SNED1Q8TER0 HEPH-209ENST00000519389 6013 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.21
SNED1Q8TER0 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
SNED1Q8TER0 KLF7-202ENST00000412414 7954 ntTSL 2 BASIC7.51□□□□□ -1.21
SNED1Q8TER0 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC7.51□□□□□ -1.21
SNED1Q8TER0 AC078880.4-201ENST00000617627 1749 ntBASIC7.51□□□□□ -1.21
SNED1Q8TER0 NOS1-206ENST00000618760 12283 ntTSL 5 BASIC7.51□□□□□ -1.21
SNED1Q8TER0 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC7.51□□□□□ -1.21
SNED1Q8TER0 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC7.51□□□□□ -1.21
SNED1Q8TER0 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC7.51□□□□□ -1.21
SNED1Q8TER0 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
SNED1Q8TER0 Z83820.1-201ENST00000456978 1499 ntBASIC7.51□□□□□ -1.21
SNED1Q8TER0 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
SNED1Q8TER0 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
SNED1Q8TER0 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
SNED1Q8TER0 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC7.51□□□□□ -1.21
SNED1Q8TER0 MCPH1-201ENST00000344683 8039 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
SNED1Q8TER0 RNU1-24P-201ENST00000364285 165 ntBASIC7.51□□□□□ -1.21
SNED1Q8TER0 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC7.51□□□□□ -1.21
SNED1Q8TER0 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC7.51□□□□□ -1.21
SNED1Q8TER0 RPSAP37-201ENST00000470913 821 ntBASIC7.51□□□□□ -1.21
SNED1Q8TER0 UBA52P7-201ENST00000486088 380 ntBASIC7.51□□□□□ -1.21
SNED1Q8TER0 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC7.51□□□□□ -1.21
SNED1Q8TER0 AP004607.6-201ENST00000525033 1202 ntBASIC7.51□□□□□ -1.21
SNED1Q8TER0 AC027026.1-201ENST00000532323 742 ntBASIC7.51□□□□□ -1.21
SNED1Q8TER0 AC022404.1-201ENST00000555320 273 ntBASIC7.51□□□□□ -1.21
SNED1Q8TER0 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
SNED1Q8TER0 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
SNED1Q8TER0 OR7A1P-202ENST00000641542 1158 ntBASIC7.51□□□□□ -1.21
SNED1Q8TER0 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
SNED1Q8TER0 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC7.51□□□□□ -1.21
SNED1Q8TER0 GNL2P1-201ENST00000451274 2190 ntBASIC7.51□□□□□ -1.21
SNED1Q8TER0 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
SNED1Q8TER0 AL359922.2-201ENST00000581788 3017 ntBASIC7.5□□□□□ -1.21
SNED1Q8TER0 UGT2B27P-201ENST00000505092 1620 ntBASIC7.5□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms