Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
CLHC1Q8NHS4 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
CLHC1Q8NHS4 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.04□□□□□ -1.44
CLHC1Q8NHS4 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
CLHC1Q8NHS4 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
CLHC1Q8NHS4 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.04□□□□□ -1.44
CLHC1Q8NHS4 AC010894.1-201ENST00000313760 361 ntBASIC6.04□□□□□ -1.44
CLHC1Q8NHS4 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
CLHC1Q8NHS4 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
CLHC1Q8NHS4 OR11H13P-201ENST00000359695 979 ntBASIC6.04□□□□□ -1.44
CLHC1Q8NHS4 SNORD16-201ENST00000362803 99 ntBASIC6.04□□□□□ -1.44
CLHC1Q8NHS4 TP63-205ENST00000392461 1251 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CLHC1Q8NHS4 RN7SKP221-201ENST00000410420 301 ntBASIC6.04□□□□□ -1.44
CLHC1Q8NHS4 RNA5SP155-201ENST00000411154 129 ntBASIC6.04□□□□□ -1.44
CLHC1Q8NHS4 GTF2IP14-201ENST00000441415 586 ntBASIC6.04□□□□□ -1.44
CLHC1Q8NHS4 COL11A2P1-205ENST00000441798 676 ntBASIC6.04□□□□□ -1.44
CLHC1Q8NHS4 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC6.04□□□□□ -1.44
CLHC1Q8NHS4 RPS27AP3-201ENST00000453803 454 ntBASIC6.04□□□□□ -1.44
CLHC1Q8NHS4 VPS25P1-201ENST00000455691 508 ntBASIC6.04□□□□□ -1.44
CLHC1Q8NHS4 AL022319.1-201ENST00000458183 1167 ntBASIC6.04□□□□□ -1.44
CLHC1Q8NHS4 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CLHC1Q8NHS4 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
CLHC1Q8NHS4 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC6.04□□□□□ -1.44
CLHC1Q8NHS4 AL133399.1-201ENST00000527476 298 ntBASIC6.04□□□□□ -1.44
CLHC1Q8NHS4 AP004607.5-201ENST00000532034 217 ntBASIC6.04□□□□□ -1.44
CLHC1Q8NHS4 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
CLHC1Q8NHS4 SLC25A51P2-201ENST00000535708 889 ntBASIC6.04□□□□□ -1.44
CLHC1Q8NHS4 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC6.04□□□□□ -1.44
CLHC1Q8NHS4 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC6.04□□□□□ -1.44
CLHC1Q8NHS4 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.04□□□□□ -1.44
CLHC1Q8NHS4 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC6.04□□□□□ -1.44
CLHC1Q8NHS4 AC068408.1-201ENST00000577406 1144 ntBASIC6.04□□□□□ -1.44
CLHC1Q8NHS4 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC6.04□□□□□ -1.44
CLHC1Q8NHS4 AC090774.2-201ENST00000584708 322 ntBASIC6.04□□□□□ -1.44
CLHC1Q8NHS4 AL021368.3-201ENST00000607119 578 ntBASIC6.04□□□□□ -1.44
CLHC1Q8NHS4 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC6.04□□□□□ -1.44
CLHC1Q8NHS4 AMYH02020865.1-207ENST00000617096 458 ntTSL 3 BASIC6.04□□□□□ -1.44
CLHC1Q8NHS4 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CLHC1Q8NHS4 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC6.04□□□□□ -1.44
CLHC1Q8NHS4 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CLHC1Q8NHS4 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CLHC1Q8NHS4 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CLHC1Q8NHS4 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
CLHC1Q8NHS4 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
CLHC1Q8NHS4 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.04□□□□□ -1.44
CLHC1Q8NHS4 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CLHC1Q8NHS4 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CLHC1Q8NHS4 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC6.04□□□□□ -1.44
CLHC1Q8NHS4 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CLHC1Q8NHS4 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CLHC1Q8NHS4 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CLHC1Q8NHS4 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CLHC1Q8NHS4 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
CLHC1Q8NHS4 AP001541.1-201ENST00000623322 1904 ntBASIC6.03□□□□□ -1.44
CLHC1Q8NHS4 USP9YP3-201ENST00000434481 1766 ntBASIC6.03□□□□□ -1.44
CLHC1Q8NHS4 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
CLHC1Q8NHS4 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC6.03□□□□□ -1.44
CLHC1Q8NHS4 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
CLHC1Q8NHS4 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CLHC1Q8NHS4 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CLHC1Q8NHS4 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
CLHC1Q8NHS4 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC6.03□□□□□ -1.44
CLHC1Q8NHS4 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.03□□□□□ -1.44
CLHC1Q8NHS4 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
CLHC1Q8NHS4 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC6.03□□□□□ -1.44
CLHC1Q8NHS4 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC6.03□□□□□ -1.44
CLHC1Q8NHS4 MIR433-201ENST00000384837 93 ntBASIC6.03□□□□□ -1.44
CLHC1Q8NHS4 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC6.03□□□□□ -1.44
CLHC1Q8NHS4 RNA5SP251-201ENST00000410614 137 ntBASIC6.03□□□□□ -1.44
CLHC1Q8NHS4 EIF3LP2-201ENST00000457262 807 ntBASIC6.03□□□□□ -1.44
CLHC1Q8NHS4 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
CLHC1Q8NHS4 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC6.03□□□□□ -1.44
CLHC1Q8NHS4 AL079303.1-201ENST00000486611 463 ntBASIC6.03□□□□□ -1.44
CLHC1Q8NHS4 RPL5P33-201ENST00000487833 905 ntBASIC6.03□□□□□ -1.44
CLHC1Q8NHS4 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC6.03□□□□□ -1.44
CLHC1Q8NHS4 AC018645.1-201ENST00000505003 109 ntBASIC6.03□□□□□ -1.44
CLHC1Q8NHS4 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC6.03□□□□□ -1.44
CLHC1Q8NHS4 AZIN1-AS1-211ENST00000520455 480 ntTSL 3 BASIC6.03□□□□□ -1.44
CLHC1Q8NHS4 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC6.03□□□□□ -1.44
CLHC1Q8NHS4 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.03□□□□□ -1.44
CLHC1Q8NHS4 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC6.03□□□□□ -1.44
CLHC1Q8NHS4 AC023080.1-201ENST00000551663 931 ntBASIC6.03□□□□□ -1.44
CLHC1Q8NHS4 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC6.03□□□□□ -1.44
CLHC1Q8NHS4 CHEK2P2-201ENST00000554701 672 ntBASIC6.03□□□□□ -1.44
CLHC1Q8NHS4 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC6.03□□□□□ -1.44
CLHC1Q8NHS4 SYPL1P2-201ENST00000582878 727 ntBASIC6.03□□□□□ -1.44
CLHC1Q8NHS4 AC027229.1-201ENST00000583887 253 ntBASIC6.03□□□□□ -1.44
CLHC1Q8NHS4 CT45A3-202ENST00000598716 855 ntAPPRIS P1 TSL 3 BASIC6.03□□□□□ -1.44
CLHC1Q8NHS4 AL078624.2-201ENST00000605063 554 ntBASIC6.03□□□□□ -1.44
CLHC1Q8NHS4 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
CLHC1Q8NHS4 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC6.03□□□□□ -1.44
CLHC1Q8NHS4 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CLHC1Q8NHS4 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CLHC1Q8NHS4 AC093297.3-201ENST00000607056 2517 ntBASIC6.03□□□□□ -1.44
CLHC1Q8NHS4 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.03□□□□□ -1.44
CLHC1Q8NHS4 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC6.03□□□□□ -1.44
CLHC1Q8NHS4 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
CLHC1Q8NHS4 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.03□□□□□ -1.44
CLHC1Q8NHS4 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.03□□□□□ -1.44
CLHC1Q8NHS4 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms