Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC168Q8NDH2 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC168Q8NDH2 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC5.28□□□□□ -1.56
CCDC168Q8NDH2 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.28□□□□□ -1.56
CCDC168Q8NDH2 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC5.28□□□□□ -1.56
CCDC168Q8NDH2 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC168Q8NDH2 IPO5-222ENST00000490680 3419 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC168Q8NDH2 ANGPT2-203ENST00000523120 2997 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC168Q8NDH2 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC5.28□□□□□ -1.56
CCDC168Q8NDH2 BX323845.3-201ENST00000428215 527 ntBASIC5.28□□□□□ -1.56
CCDC168Q8NDH2 AC011225.1-201ENST00000457751 369 ntBASIC5.28□□□□□ -1.56
CCDC168Q8NDH2 AC004815.1-201ENST00000484185 331 ntBASIC5.28□□□□□ -1.56
CCDC168Q8NDH2 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC168Q8NDH2 KHDC1P1-201ENST00000511053 508 ntBASIC5.28□□□□□ -1.56
CCDC168Q8NDH2 AC084816.1-202ENST00000536744 647 ntTSL 2 BASIC5.28□□□□□ -1.56
CCDC168Q8NDH2 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC5.28□□□□□ -1.56
CCDC168Q8NDH2 AC090616.1-201ENST00000583895 447 ntBASIC5.28□□□□□ -1.56
CCDC168Q8NDH2 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.28□□□□□ -1.56
CCDC168Q8NDH2 AL157899.1-201ENST00000604110 936 ntBASIC5.28□□□□□ -1.56
CCDC168Q8NDH2 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC168Q8NDH2 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.28□□□□□ -1.56
CCDC168Q8NDH2 AC093278.2-201ENST00000564956 2485 ntBASIC5.28□□□□□ -1.56
CCDC168Q8NDH2 CD101-202ENST00000369470 3324 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC168Q8NDH2 TSHZ2-201ENST00000329613 3093 ntTSL 4 BASIC5.28□□□□□ -1.56
CCDC168Q8NDH2 NAT10-205ENST00000531159 3436 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
CCDC168Q8NDH2 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC168Q8NDH2 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC168Q8NDH2 GJA1-201ENST00000282561 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC168Q8NDH2 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC168Q8NDH2 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC168Q8NDH2 SPATA31B1P-201ENST00000434692 4016 ntBASIC5.28□□□□□ -1.56
CCDC168Q8NDH2 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC168Q8NDH2 PDE11A-212ENST00000358450 3489 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC168Q8NDH2 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC168Q8NDH2 AL445238.1-204ENST00000400311 463 ntBASIC5.28□□□□□ -1.56
CCDC168Q8NDH2 MTND6P1-201ENST00000417434 424 ntBASIC5.28□□□□□ -1.56
CCDC168Q8NDH2 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC5.28□□□□□ -1.56
CCDC168Q8NDH2 EIF2S2P3-201ENST00000428356 999 ntBASIC5.28□□□□□ -1.56
CCDC168Q8NDH2 NDUFS5P5-201ENST00000437256 321 ntBASIC5.28□□□□□ -1.56
CCDC168Q8NDH2 SUMO2P3-201ENST00000438311 288 ntBASIC5.28□□□□□ -1.56
CCDC168Q8NDH2 CYCSP51-201ENST00000443545 318 ntBASIC5.28□□□□□ -1.56
CCDC168Q8NDH2 SUMO2P7-201ENST00000511179 285 ntBASIC5.28□□□□□ -1.56
CCDC168Q8NDH2 MIAT_exon5_1.1-201ENST00000618919 149 ntBASIC5.28□□□□□ -1.56
CCDC168Q8NDH2 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
CCDC168Q8NDH2 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC5.28□□□□□ -1.56
CCDC168Q8NDH2 CU639417.4-201ENST00000623928 207 ntBASIC5.28□□□□□ -1.56
CCDC168Q8NDH2 BPTF-203ENST00000335221 2627 ntTSL 5 BASIC5.27□□□□□ -1.57
CCDC168Q8NDH2 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
CCDC168Q8NDH2 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC5.27□□□□□ -1.57
CCDC168Q8NDH2 AC092725.2-201ENST00000567658 1389 ntBASIC5.27□□□□□ -1.57
CCDC168Q8NDH2 ZNF300-204ENST00000427179 4155 ntTSL 2 BASIC5.27□□□□□ -1.57
CCDC168Q8NDH2 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC5.27□□□□□ -1.57
CCDC168Q8NDH2 TRIM6-201ENST00000278302 3217 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC168Q8NDH2 HCG18-244ENST00000602516 2890 ntBASIC5.27□□□□□ -1.57
CCDC168Q8NDH2 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC168Q8NDH2 SLC8A1-201ENST00000332839 2922 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC168Q8NDH2 AL592429.1-201ENST00000403909 1473 ntBASIC5.27□□□□□ -1.57
CCDC168Q8NDH2 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
CCDC168Q8NDH2 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC5.27□□□□□ -1.57
CCDC168Q8NDH2 ZNF841-201ENST00000389534 3503 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC168Q8NDH2 MFSD4BP1-201ENST00000513330 1552 ntBASIC5.27□□□□□ -1.57
CCDC168Q8NDH2 LINC02019-201ENST00000608605 2060 ntBASIC5.27□□□□□ -1.57
CCDC168Q8NDH2 SNORA11C-201ENST00000408532 129 ntBASIC5.27□□□□□ -1.57
CCDC168Q8NDH2 CYCSP52-201ENST00000422857 310 ntBASIC5.27□□□□□ -1.57
CCDC168Q8NDH2 EEF1B2P6-201ENST00000445713 673 ntBASIC5.27□□□□□ -1.57
CCDC168Q8NDH2 AC073909.1-201ENST00000447112 999 ntBASIC5.27□□□□□ -1.57
CCDC168Q8NDH2 AC068721.1-201ENST00000507156 583 ntTSL 5 BASIC5.27□□□□□ -1.57
CCDC168Q8NDH2 AC021146.10-201ENST00000515628 706 ntBASIC5.27□□□□□ -1.57
CCDC168Q8NDH2 OR5D15P-201ENST00000531671 942 ntBASIC5.27□□□□□ -1.57
CCDC168Q8NDH2 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.27□□□□□ -1.57
CCDC168Q8NDH2 AL031722.1-201ENST00000570247 220 ntTSL 5 BASIC5.27□□□□□ -1.57
CCDC168Q8NDH2 NOTCH2-206ENST00000579475 2954 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC168Q8NDH2 AL356986.1-201ENST00000604085 341 ntBASIC5.27□□□□□ -1.57
CCDC168Q8NDH2 AL136131.3-201ENST00000607600 188 ntBASIC5.27□□□□□ -1.57
CCDC168Q8NDH2 RPSAP73-201ENST00000614820 330 ntBASIC5.27□□□□□ -1.57
CCDC168Q8NDH2 AC073488.2-201ENST00000631903 751 ntBASIC5.27□□□□□ -1.57
CCDC168Q8NDH2 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC168Q8NDH2 FAM135A-207ENST00000457062 5282 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC168Q8NDH2 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC5.27□□□□□ -1.57
CCDC168Q8NDH2 UGT2B4-201ENST00000305107 2103 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC168Q8NDH2 LRRC37A4P-201ENST00000579913 3243 ntTSL 2 BASIC5.27□□□□□ -1.57
CCDC168Q8NDH2 SAGE3P-201ENST00000619800 1635 ntBASIC5.27□□□□□ -1.57
CCDC168Q8NDH2 DICER1-204ENST00000527414 6179 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC168Q8NDH2 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC168Q8NDH2 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC168Q8NDH2 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
CCDC168Q8NDH2 AC103591.2-201ENST00000265259 766 ntBASIC5.26□□□□□ -1.57
CCDC168Q8NDH2 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
CCDC168Q8NDH2 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
CCDC168Q8NDH2 FAR2P2-201ENST00000413041 594 ntBASIC5.26□□□□□ -1.57
CCDC168Q8NDH2 TNPO1P1-201ENST00000423641 1138 ntBASIC5.26□□□□□ -1.57
CCDC168Q8NDH2 FAR2P4-202ENST00000425399 584 ntBASIC5.26□□□□□ -1.57
CCDC168Q8NDH2 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.26□□□□□ -1.57
CCDC168Q8NDH2 FAR2P1-206ENST00000449736 709 ntBASIC5.26□□□□□ -1.57
CCDC168Q8NDH2 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC5.26□□□□□ -1.57
CCDC168Q8NDH2 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC5.26□□□□□ -1.57
CCDC168Q8NDH2 PDE4DIP-208ENST00000464103 1055 ntTSL 5 BASIC5.26□□□□□ -1.57
CCDC168Q8NDH2 CBX1P5-201ENST00000475330 559 ntBASIC5.26□□□□□ -1.57
CCDC168Q8NDH2 AC092865.4-201ENST00000477936 615 ntBASIC5.26□□□□□ -1.57
CCDC168Q8NDH2 UBA52P7-201ENST00000486088 380 ntBASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms