Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
CCDC33Q8N5R6 RNU1-55P-201ENST00000365510 158 ntBASIC6.92□□□□□ -1.3
CCDC33Q8N5R6 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC6.92□□□□□ -1.3
CCDC33Q8N5R6 UBBP1-201ENST00000392399 473 ntBASIC6.92□□□□□ -1.3
CCDC33Q8N5R6 AL359694.1-201ENST00000403247 604 ntBASIC6.92□□□□□ -1.3
CCDC33Q8N5R6 AL589655.1-201ENST00000405398 482 ntBASIC6.92□□□□□ -1.3
CCDC33Q8N5R6 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC6.92□□□□□ -1.3
CCDC33Q8N5R6 GAPDHP57-201ENST00000424400 585 ntBASIC6.92□□□□□ -1.3
CCDC33Q8N5R6 EIF2S2P3-201ENST00000428356 999 ntBASIC6.92□□□□□ -1.3
CCDC33Q8N5R6 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC6.92□□□□□ -1.3
CCDC33Q8N5R6 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC6.92□□□□□ -1.3
CCDC33Q8N5R6 AL606490.8-201ENST00000441624 319 ntBASIC6.92□□□□□ -1.3
CCDC33Q8N5R6 SEPT14P12-201ENST00000442280 560 ntBASIC6.92□□□□□ -1.3
CCDC33Q8N5R6 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC6.92□□□□□ -1.3
CCDC33Q8N5R6 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CCDC33Q8N5R6 HGF-207ENST00000453018 721 ntTSL 3 BASIC6.92□□□□□ -1.3
CCDC33Q8N5R6 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC6.92□□□□□ -1.3
CCDC33Q8N5R6 AC093664.1-201ENST00000511779 289 ntBASIC6.92□□□□□ -1.3
CCDC33Q8N5R6 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC6.92□□□□□ -1.3
CCDC33Q8N5R6 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC6.92□□□□□ -1.3
CCDC33Q8N5R6 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC6.92□□□□□ -1.3
CCDC33Q8N5R6 C14orf119-202ENST00000554203 725 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
CCDC33Q8N5R6 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CCDC33Q8N5R6 AC091768.1-201ENST00000609258 930 ntBASIC6.92□□□□□ -1.3
CCDC33Q8N5R6 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC6.92□□□□□ -1.3
CCDC33Q8N5R6 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC6.92□□□□□ -1.3
CCDC33Q8N5R6 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC6.92□□□□□ -1.3
CCDC33Q8N5R6 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CCDC33Q8N5R6 AC009120.2-204ENST00000621548 2032 ntBASIC6.92□□□□□ -1.3
CCDC33Q8N5R6 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
CCDC33Q8N5R6 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
CCDC33Q8N5R6 AC119674.1-204ENST00000641348 1343 ntBASIC6.92□□□□□ -1.3
CCDC33Q8N5R6 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CCDC33Q8N5R6 AC114876.1-201ENST00000490962 1366 ntBASIC6.92□□□□□ -1.3
CCDC33Q8N5R6 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
CCDC33Q8N5R6 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC6.92□□□□□ -1.3
CCDC33Q8N5R6 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CCDC33Q8N5R6 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CCDC33Q8N5R6 AL391261.1-201ENST00000555712 1479 ntBASIC6.92□□□□□ -1.3
CCDC33Q8N5R6 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CCDC33Q8N5R6 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CCDC33Q8N5R6 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC6.91□□□□□ -1.3
CCDC33Q8N5R6 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CCDC33Q8N5R6 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
CCDC33Q8N5R6 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CCDC33Q8N5R6 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
CCDC33Q8N5R6 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC6.91□□□□□ -1.3
CCDC33Q8N5R6 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC6.91□□□□□ -1.3
CCDC33Q8N5R6 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CCDC33Q8N5R6 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC6.91□□□□□ -1.3
CCDC33Q8N5R6 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CCDC33Q8N5R6 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CCDC33Q8N5R6 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CCDC33Q8N5R6 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC6.91□□□□□ -1.3
CCDC33Q8N5R6 AL033543.1-201ENST00000623440 13454 ntBASIC6.91□□□□□ -1.3
CCDC33Q8N5R6 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CCDC33Q8N5R6 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC6.91□□□□□ -1.3
CCDC33Q8N5R6 ODF3-202ENST00000342593 386 ntTSL 5 BASIC6.91□□□□□ -1.3
CCDC33Q8N5R6 RNU6-618P-201ENST00000363518 112 ntBASIC6.91□□□□□ -1.3
CCDC33Q8N5R6 RNA5SP512-201ENST00000364550 120 ntBASIC6.91□□□□□ -1.3
CCDC33Q8N5R6 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC6.91□□□□□ -1.3
CCDC33Q8N5R6 AL390879.2-203ENST00000426943 1121 ntBASIC6.91□□□□□ -1.3
CCDC33Q8N5R6 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC6.91□□□□□ -1.3
CCDC33Q8N5R6 RPS10P21-201ENST00000430654 475 ntBASIC6.91□□□□□ -1.3
CCDC33Q8N5R6 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC6.91□□□□□ -1.3
CCDC33Q8N5R6 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CCDC33Q8N5R6 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC6.91□□□□□ -1.3
CCDC33Q8N5R6 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC6.91□□□□□ -1.3
CCDC33Q8N5R6 CRYGGP-201ENST00000443337 145 ntBASIC6.91□□□□□ -1.3
CCDC33Q8N5R6 MORF4L1P4-201ENST00000450245 976 ntBASIC6.91□□□□□ -1.3
CCDC33Q8N5R6 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC6.91□□□□□ -1.3
CCDC33Q8N5R6 RPS27P20-201ENST00000492051 246 ntBASIC6.91□□□□□ -1.3
CCDC33Q8N5R6 AC063943.2-201ENST00000495697 534 ntBASIC6.91□□□□□ -1.3
CCDC33Q8N5R6 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
CCDC33Q8N5R6 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC6.91□□□□□ -1.3
CCDC33Q8N5R6 RN7SKP70-201ENST00000516655 271 ntBASIC6.91□□□□□ -1.3
CCDC33Q8N5R6 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC6.91□□□□□ -1.3
CCDC33Q8N5R6 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC6.91□□□□□ -1.3
CCDC33Q8N5R6 AC092375.1-201ENST00000550410 637 ntBASIC6.91□□□□□ -1.3
CCDC33Q8N5R6 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC6.91□□□□□ -1.3
CCDC33Q8N5R6 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC6.91□□□□□ -1.3
CCDC33Q8N5R6 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC6.91□□□□□ -1.3
CCDC33Q8N5R6 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC6.91□□□□□ -1.3
CCDC33Q8N5R6 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC6.91□□□□□ -1.3
CCDC33Q8N5R6 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC6.91□□□□□ -1.3
CCDC33Q8N5R6 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC6.91□□□□□ -1.3
CCDC33Q8N5R6 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC6.91□□□□□ -1.3
CCDC33Q8N5R6 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
CCDC33Q8N5R6 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC6.91□□□□□ -1.3
CCDC33Q8N5R6 AL121936.2-201ENST00000641935 662 ntBASIC6.91□□□□□ -1.3
CCDC33Q8N5R6 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CCDC33Q8N5R6 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CCDC33Q8N5R6 Z97989.1-201ENST00000531702 2421 ntBASIC6.91□□□□□ -1.3
CCDC33Q8N5R6 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
CCDC33Q8N5R6 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CCDC33Q8N5R6 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CCDC33Q8N5R6 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC6.91□□□□□ -1.3
CCDC33Q8N5R6 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC6.91□□□□□ -1.3
CCDC33Q8N5R6 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC6.91□□□□□ -1.3
CCDC33Q8N5R6 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC6.91□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 132.5 ms