Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC6.87□□□□□ -1.31
TRIM48Q8IWZ4 AC069240.2-201ENST00000550242 609 ntBASIC6.87□□□□□ -1.31
TRIM48Q8IWZ4 NPIPB9-202ENST00000550983 2123 ntAPPRIS P2 TSL 1 (best) BASIC6.87□□□□□ -1.31
TRIM48Q8IWZ4 AC010287.1-201ENST00000566916 357 ntBASIC6.87□□□□□ -1.31
TRIM48Q8IWZ4 AP005136.2-201ENST00000583253 1049 ntBASIC6.87□□□□□ -1.31
TRIM48Q8IWZ4 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
TRIM48Q8IWZ4 UBA2-208ENST00000592791 910 ntTSL 2 BASIC6.87□□□□□ -1.31
TRIM48Q8IWZ4 AC011447.2-201ENST00000592921 283 ntBASIC6.87□□□□□ -1.31
TRIM48Q8IWZ4 RPS27AP19-201ENST00000597285 458 ntBASIC6.87□□□□□ -1.31
TRIM48Q8IWZ4 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC6.87□□□□□ -1.31
TRIM48Q8IWZ4 LINC02019-202ENST00000609204 845 ntTSL 2 BASIC6.87□□□□□ -1.31
TRIM48Q8IWZ4 CXADRP3-202ENST00000617265 1100 ntBASIC6.87□□□□□ -1.31
TRIM48Q8IWZ4 Z83818.2-201ENST00000635331 433 ntTSL 3 BASIC6.87□□□□□ -1.31
TRIM48Q8IWZ4 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC6.87□□□□□ -1.31
TRIM48Q8IWZ4 NR3C1-205ENST00000415690 3789 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
TRIM48Q8IWZ4 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
TRIM48Q8IWZ4 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC6.87□□□□□ -1.31
TRIM48Q8IWZ4 ADH4-212ENST00000629236 1974 ntTSL 5 BASIC6.87□□□□□ -1.31
TRIM48Q8IWZ4 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
TRIM48Q8IWZ4 LINC01013-201ENST00000422700 1831 ntTSL 5 BASIC6.87□□□□□ -1.31
TRIM48Q8IWZ4 LINC01697-202ENST00000426534 1764 ntTSL 2 BASIC6.87□□□□□ -1.31
TRIM48Q8IWZ4 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
TRIM48Q8IWZ4 GPR1-AS-201ENST00000623040 3708 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
TRIM48Q8IWZ4 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
TRIM48Q8IWZ4 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
TRIM48Q8IWZ4 AC011592.1-201ENST00000624647 3634 ntBASIC6.87□□□□□ -1.31
TRIM48Q8IWZ4 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC6.87□□□□□ -1.31
TRIM48Q8IWZ4 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC6.87□□□□□ -1.31
TRIM48Q8IWZ4 ARHGAP42P4-201ENST00000549782 2934 ntBASIC6.87□□□□□ -1.31
TRIM48Q8IWZ4 AQP4-AS1-202ENST00000578701 2177 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
TRIM48Q8IWZ4 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
TRIM48Q8IWZ4 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC6.86□□□□□ -1.31
TRIM48Q8IWZ4 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.86□□□□□ -1.31
TRIM48Q8IWZ4 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
TRIM48Q8IWZ4 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC6.86□□□□□ -1.31
TRIM48Q8IWZ4 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
TRIM48Q8IWZ4 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
TRIM48Q8IWZ4 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC6.86□□□□□ -1.31
TRIM48Q8IWZ4 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC6.86□□□□□ -1.31
TRIM48Q8IWZ4 AC092725.2-201ENST00000567658 1389 ntBASIC6.86□□□□□ -1.31
TRIM48Q8IWZ4 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC6.86□□□□□ -1.31
TRIM48Q8IWZ4 OR52D1-201ENST00000322641 1065 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
TRIM48Q8IWZ4 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
TRIM48Q8IWZ4 RNU6-697P-201ENST00000363348 107 ntBASIC6.86□□□□□ -1.31
TRIM48Q8IWZ4 Y_RNA.318-201ENST00000365131 97 ntBASIC6.86□□□□□ -1.31
TRIM48Q8IWZ4 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
TRIM48Q8IWZ4 RNU6-468P-201ENST00000384003 109 ntBASIC6.86□□□□□ -1.31
TRIM48Q8IWZ4 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
TRIM48Q8IWZ4 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
TRIM48Q8IWZ4 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC6.86□□□□□ -1.31
TRIM48Q8IWZ4 RN7SKP97-201ENST00000410966 333 ntBASIC6.86□□□□□ -1.31
TRIM48Q8IWZ4 AC007091.1-201ENST00000412563 566 ntTSL 5 BASIC6.86□□□□□ -1.31
TRIM48Q8IWZ4 AC009518.2-201ENST00000418056 731 ntBASIC6.86□□□□□ -1.31
TRIM48Q8IWZ4 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC6.86□□□□□ -1.31
TRIM48Q8IWZ4 AC016907.1-201ENST00000419483 435 ntBASIC6.86□□□□□ -1.31
TRIM48Q8IWZ4 AL672212.1-201ENST00000422246 400 ntBASIC6.86□□□□□ -1.31
TRIM48Q8IWZ4 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC6.86□□□□□ -1.31
TRIM48Q8IWZ4 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC6.86□□□□□ -1.31
TRIM48Q8IWZ4 USP9YP28-201ENST00000435142 589 ntBASIC6.86□□□□□ -1.31
TRIM48Q8IWZ4 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC6.86□□□□□ -1.31
TRIM48Q8IWZ4 CR769776.1-201ENST00000441254 787 ntBASIC6.86□□□□□ -1.31
TRIM48Q8IWZ4 BX005266.3-201ENST00000443013 1075 ntBASIC6.86□□□□□ -1.31
TRIM48Q8IWZ4 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC6.86□□□□□ -1.31
TRIM48Q8IWZ4 VN1R6P-201ENST00000458417 907 ntBASIC6.86□□□□□ -1.31
TRIM48Q8IWZ4 RNU7-157P-201ENST00000459600 66 ntBASIC6.86□□□□□ -1.31
TRIM48Q8IWZ4 NAP1L1P3-201ENST00000462291 880 ntBASIC6.86□□□□□ -1.31
TRIM48Q8IWZ4 RPL23AP8-201ENST00000479812 475 ntBASIC6.86□□□□□ -1.31
TRIM48Q8IWZ4 RN7SL267P-201ENST00000485107 261 ntBASIC6.86□□□□□ -1.31
TRIM48Q8IWZ4 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC6.86□□□□□ -1.31
TRIM48Q8IWZ4 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC6.86□□□□□ -1.31
TRIM48Q8IWZ4 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
TRIM48Q8IWZ4 AC097451.1-201ENST00000507388 653 ntTSL 3 BASIC6.86□□□□□ -1.31
TRIM48Q8IWZ4 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC6.86□□□□□ -1.31
TRIM48Q8IWZ4 IGLC4-201ENST00000517690 248 ntBASIC6.86□□□□□ -1.31
TRIM48Q8IWZ4 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC6.86□□□□□ -1.31
TRIM48Q8IWZ4 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
TRIM48Q8IWZ4 AL135978.1-201ENST00000553618 1266 ntBASIC6.86□□□□□ -1.31
TRIM48Q8IWZ4 AC010761.3-201ENST00000578819 499 ntTSL 3 BASIC6.86□□□□□ -1.31
TRIM48Q8IWZ4 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC6.86□□□□□ -1.31
TRIM48Q8IWZ4 OOSP1P2-201ENST00000579644 351 ntBASIC6.86□□□□□ -1.31
TRIM48Q8IWZ4 MIR4428-201ENST00000584884 73 ntBASIC6.86□□□□□ -1.31
TRIM48Q8IWZ4 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC6.86□□□□□ -1.31
TRIM48Q8IWZ4 AC010605.1-201ENST00000597303 797 ntTSL 2 BASIC6.86□□□□□ -1.31
TRIM48Q8IWZ4 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC6.86□□□□□ -1.31
TRIM48Q8IWZ4 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC6.86□□□□□ -1.31
TRIM48Q8IWZ4 AP002802.2-201ENST00000605877 235 ntBASIC6.86□□□□□ -1.31
TRIM48Q8IWZ4 AC090617.9-201ENST00000623751 147 ntBASIC6.86□□□□□ -1.31
TRIM48Q8IWZ4 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
TRIM48Q8IWZ4 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
TRIM48Q8IWZ4 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
TRIM48Q8IWZ4 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
TRIM48Q8IWZ4 PSG6-201ENST00000187910 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
TRIM48Q8IWZ4 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
TRIM48Q8IWZ4 WDR89-202ENST00000394942 2993 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
TRIM48Q8IWZ4 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
TRIM48Q8IWZ4 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
TRIM48Q8IWZ4 TPTE2P2-201ENST00000403471 1466 ntBASIC6.85□□□□□ -1.31
TRIM48Q8IWZ4 CEACAM20-205ENST00000620096 1494 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
TRIM48Q8IWZ4 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
TRIM48Q8IWZ4 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms