Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
ANKRD55Q3KP44 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
ANKRD55Q3KP44 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.34□□□□□ -1.55
ANKRD55Q3KP44 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
ANKRD55Q3KP44 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.34□□□□□ -1.55
ANKRD55Q3KP44 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
ANKRD55Q3KP44 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
ANKRD55Q3KP44 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.34□□□□□ -1.55
ANKRD55Q3KP44 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
ANKRD55Q3KP44 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.34□□□□□ -1.55
ANKRD55Q3KP44 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.34□□□□□ -1.55
ANKRD55Q3KP44 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC5.34□□□□□ -1.55
ANKRD55Q3KP44 AC015799.1-201ENST00000622996 3122 ntBASIC5.34□□□□□ -1.55
ANKRD55Q3KP44 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
ANKRD55Q3KP44 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
ANKRD55Q3KP44 OR10D1P-201ENST00000355343 936 ntBASIC5.34□□□□□ -1.55
ANKRD55Q3KP44 RN7SKP257-201ENST00000364525 309 ntBASIC5.34□□□□□ -1.55
ANKRD55Q3KP44 RNA5SP355-201ENST00000365317 135 ntBASIC5.34□□□□□ -1.55
ANKRD55Q3KP44 NOX1-203ENST00000372964 661 ntTSL 2 BASIC5.34□□□□□ -1.55
ANKRD55Q3KP44 SPRY4-AS1-201ENST00000414314 521 ntTSL 3 BASIC5.34□□□□□ -1.55
ANKRD55Q3KP44 PTP4A1P1-201ENST00000420539 515 ntBASIC5.34□□□□□ -1.55
ANKRD55Q3KP44 AL359633.1-201ENST00000421403 310 ntBASIC5.34□□□□□ -1.55
ANKRD55Q3KP44 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC5.34□□□□□ -1.55
ANKRD55Q3KP44 SNRPEP5-201ENST00000425442 278 ntBASIC5.34□□□□□ -1.55
ANKRD55Q3KP44 HNRNPA1P57-201ENST00000431359 530 ntTSL 4 BASIC5.34□□□□□ -1.55
ANKRD55Q3KP44 AC009518.3-201ENST00000438972 253 ntBASIC5.34□□□□□ -1.55
ANKRD55Q3KP44 AC079922.1-201ENST00000443291 359 ntBASIC5.34□□□□□ -1.55
ANKRD55Q3KP44 AL391361.2-203ENST00000443380 413 ntTSL 2 BASIC5.34□□□□□ -1.55
ANKRD55Q3KP44 AC092967.1-201ENST00000449016 481 ntBASIC5.34□□□□□ -1.55
ANKRD55Q3KP44 MED28P7-201ENST00000456611 530 ntBASIC5.34□□□□□ -1.55
ANKRD55Q3KP44 AL096803.1-201ENST00000456921 1021 ntBASIC5.34□□□□□ -1.55
ANKRD55Q3KP44 RPS26P6-201ENST00000475156 348 ntBASIC5.34□□□□□ -1.55
ANKRD55Q3KP44 RPS10P28-201ENST00000480396 498 ntBASIC5.34□□□□□ -1.55
ANKRD55Q3KP44 RPL7AP23-201ENST00000482625 776 ntBASIC5.34□□□□□ -1.55
ANKRD55Q3KP44 HMGB3P14-201ENST00000494195 599 ntBASIC5.34□□□□□ -1.55
ANKRD55Q3KP44 AP000926.3-201ENST00000497201 299 ntBASIC5.34□□□□□ -1.55
ANKRD55Q3KP44 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC5.34□□□□□ -1.55
ANKRD55Q3KP44 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC5.34□□□□□ -1.55
ANKRD55Q3KP44 RPL7L1P7-201ENST00000509986 724 ntBASIC5.34□□□□□ -1.55
ANKRD55Q3KP44 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC5.34□□□□□ -1.55
ANKRD55Q3KP44 IQCH-203ENST00000512104 1000 ntTSL 2 BASIC5.34□□□□□ -1.55
ANKRD55Q3KP44 IGKV2-19-201ENST00000518132 283 ntBASIC5.34□□□□□ -1.55
ANKRD55Q3KP44 C8orf44-205ENST00000521889 598 ntAPPRIS ALT2 TSL 3 BASIC5.34□□□□□ -1.55
ANKRD55Q3KP44 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC5.34□□□□□ -1.55
ANKRD55Q3KP44 PVT1-214ENST00000522875 922 ntTSL 5 BASIC5.34□□□□□ -1.55
ANKRD55Q3KP44 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.34□□□□□ -1.55
ANKRD55Q3KP44 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC5.34□□□□□ -1.55
ANKRD55Q3KP44 AC005833.3-202ENST00000544741 770 ntAPPRIS P1 TSL 3 BASIC5.34□□□□□ -1.55
ANKRD55Q3KP44 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC5.34□□□□□ -1.55
ANKRD55Q3KP44 AC090651.1-201ENST00000567865 634 ntBASIC5.34□□□□□ -1.55
ANKRD55Q3KP44 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC5.34□□□□□ -1.55
ANKRD55Q3KP44 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC5.34□□□□□ -1.55
ANKRD55Q3KP44 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC5.34□□□□□ -1.55
ANKRD55Q3KP44 AL512605.1-201ENST00000588215 1263 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
ANKRD55Q3KP44 FP325318.1-201ENST00000616097 1263 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
ANKRD55Q3KP44 AC008626.2-201ENST00000624425 248 ntBASIC5.34□□□□□ -1.55
ANKRD55Q3KP44 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
ANKRD55Q3KP44 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
ANKRD55Q3KP44 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
ANKRD55Q3KP44 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
ANKRD55Q3KP44 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC5.34□□□□□ -1.55
ANKRD55Q3KP44 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
ANKRD55Q3KP44 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
ANKRD55Q3KP44 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
ANKRD55Q3KP44 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
ANKRD55Q3KP44 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
ANKRD55Q3KP44 AL359976.1-201ENST00000418655 3528 ntBASIC5.34□□□□□ -1.56
ANKRD55Q3KP44 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
ANKRD55Q3KP44 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC5.33□□□□□ -1.56
ANKRD55Q3KP44 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
ANKRD55Q3KP44 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.33□□□□□ -1.56
ANKRD55Q3KP44 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.33□□□□□ -1.56
ANKRD55Q3KP44 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC5.33□□□□□ -1.56
ANKRD55Q3KP44 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
ANKRD55Q3KP44 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
ANKRD55Q3KP44 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.33□□□□□ -1.56
ANKRD55Q3KP44 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.33□□□□□ -1.56
ANKRD55Q3KP44 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
ANKRD55Q3KP44 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC5.33□□□□□ -1.56
ANKRD55Q3KP44 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
ANKRD55Q3KP44 AC023245.2-201ENST00000530760 2978 ntBASIC5.33□□□□□ -1.56
ANKRD55Q3KP44 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC5.33□□□□□ -1.56
ANKRD55Q3KP44 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
ANKRD55Q3KP44 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
ANKRD55Q3KP44 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
ANKRD55Q3KP44 OR5AU1-201ENST00000304418 1199 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
ANKRD55Q3KP44 MYL1-201ENST00000341685 870 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
ANKRD55Q3KP44 Y_RNA.62-201ENST00000362840 99 ntBASIC5.33□□□□□ -1.56
ANKRD55Q3KP44 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
ANKRD55Q3KP44 OR2H1-204ENST00000396792 1294 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
ANKRD55Q3KP44 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
ANKRD55Q3KP44 AL121835.1-201ENST00000404250 354 ntBASIC5.33□□□□□ -1.56
ANKRD55Q3KP44 RSPH14-202ENST00000406876 519 ntTSL 3 BASIC5.33□□□□□ -1.56
ANKRD55Q3KP44 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC5.33□□□□□ -1.56
ANKRD55Q3KP44 RNA5SP280-201ENST00000411230 115 ntBASIC5.33□□□□□ -1.56
ANKRD55Q3KP44 CYTOR-207ENST00000414584 772 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
ANKRD55Q3KP44 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5.33□□□□□ -1.56
ANKRD55Q3KP44 MRPS21P5-201ENST00000417885 231 ntBASIC5.33□□□□□ -1.56
ANKRD55Q3KP44 OR52S1P-201ENST00000427016 937 ntBASIC5.33□□□□□ -1.56
ANKRD55Q3KP44 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms