Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 BX664727.3-202ENST00000421686 1761 ntTSL 5 BASIC7.33□□□□□ -1.24
PCDH1Q08174 TRIM49-201ENST00000329758 2163 ntAPPRIS P2 TSL 1 (best) BASIC7.33□□□□□ -1.24
PCDH1Q08174 TRIM49C-201ENST00000448984 2163 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
PCDH1Q08174 TRIM49B-202ENST00000622138 2162 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
PCDH1Q08174 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
PCDH1Q08174 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC7.33□□□□□ -1.24
PCDH1Q08174 AL137918.1-201ENST00000624542 1922 ntBASIC7.33□□□□□ -1.24
PCDH1Q08174 CPM-202ENST00000546373 2116 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
PCDH1Q08174 RNASE9-209ENST00000557068 2703 ntAPPRIS P3 TSL 2 BASIC7.33□□□□□ -1.24
PCDH1Q08174 SELP-201ENST00000263686 3142 ntAPPRIS P2 TSL 1 (best) BASIC7.33□□□□□ -1.24
PCDH1Q08174 ADGRG7-201ENST00000273352 3140 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
PCDH1Q08174 MAPK10-392ENST00000642103 3126 ntAPPRIS P2 BASIC7.33□□□□□ -1.24
PCDH1Q08174 USPL1-201ENST00000255304 3814 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
PCDH1Q08174 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
PCDH1Q08174 RNU6-694P-201ENST00000364071 147 ntBASIC7.33□□□□□ -1.24
PCDH1Q08174 Y_RNA.209-201ENST00000364156 111 ntBASIC7.33□□□□□ -1.24
PCDH1Q08174 RNA5SP79-201ENST00000365193 109 ntBASIC7.33□□□□□ -1.24
PCDH1Q08174 RPL10P10-201ENST00000403509 664 ntBASIC7.33□□□□□ -1.24
PCDH1Q08174 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
PCDH1Q08174 RNU6-757P-201ENST00000410334 100 ntBASIC7.33□□□□□ -1.24
PCDH1Q08174 RPL26P37-201ENST00000411983 438 ntBASIC7.33□□□□□ -1.24
PCDH1Q08174 OR8G2P-201ENST00000412796 908 ntBASIC7.33□□□□□ -1.24
PCDH1Q08174 PGBD4P8-201ENST00000412993 562 ntBASIC7.33□□□□□ -1.24
PCDH1Q08174 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC7.33□□□□□ -1.24
PCDH1Q08174 AKR1B15-201ENST00000423958 1035 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
PCDH1Q08174 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC7.33□□□□□ -1.24
PCDH1Q08174 KLF7-IT1-201ENST00000428777 655 ntTSL 2 BASIC7.33□□□□□ -1.24
PCDH1Q08174 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC7.33□□□□□ -1.24
PCDH1Q08174 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC7.33□□□□□ -1.24
PCDH1Q08174 Z83313.1-201ENST00000433780 718 ntBASIC7.33□□□□□ -1.24
PCDH1Q08174 AL353653.1-202ENST00000435177 539 ntTSL 3 BASIC7.33□□□□□ -1.24
PCDH1Q08174 LYSMD1-202ENST00000440902 1003 ntTSL 2 BASIC7.33□□□□□ -1.24
PCDH1Q08174 AL591503.2-201ENST00000442314 1005 ntBASIC7.33□□□□□ -1.24
PCDH1Q08174 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC7.33□□□□□ -1.24
PCDH1Q08174 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC7.33□□□□□ -1.24
PCDH1Q08174 CDC27P1-201ENST00000445384 715 ntBASIC7.33□□□□□ -1.24
PCDH1Q08174 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC7.33□□□□□ -1.24
PCDH1Q08174 IGKV1OR2-2-201ENST00000451163 355 ntBASIC7.33□□□□□ -1.24
PCDH1Q08174 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC7.33□□□□□ -1.24
PCDH1Q08174 AC107015.1-201ENST00000466902 747 ntBASIC7.33□□□□□ -1.24
PCDH1Q08174 AC074386.1-206ENST00000487102 761 ntBASIC7.33□□□□□ -1.24
PCDH1Q08174 AC112219.1-201ENST00000491567 947 ntTSL 3 BASIC7.33□□□□□ -1.24
PCDH1Q08174 RN7SL869P-201ENST00000497032 300 ntBASIC7.33□□□□□ -1.24
PCDH1Q08174 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
PCDH1Q08174 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
PCDH1Q08174 AC025766.1-201ENST00000514061 409 ntTSL 5 BASIC7.33□□□□□ -1.24
PCDH1Q08174 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC7.33□□□□□ -1.24
PCDH1Q08174 AC027541.1-201ENST00000519306 485 ntTSL 3 BASIC7.33□□□□□ -1.24
PCDH1Q08174 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC7.33□□□□□ -1.24
PCDH1Q08174 OR8G3P-201ENST00000533406 921 ntBASIC7.33□□□□□ -1.24
PCDH1Q08174 LINC02443-201ENST00000536518 585 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
PCDH1Q08174 AC078929.1-201ENST00000547679 502 ntTSL 3 BASIC7.33□□□□□ -1.24
PCDH1Q08174 GNG2-215ENST00000557376 573 ntTSL 4 BASIC7.33□□□□□ -1.24
PCDH1Q08174 AC114546.2-201ENST00000560683 477 ntTSL 3 BASIC7.33□□□□□ -1.24
PCDH1Q08174 AC136619.2-201ENST00000563361 631 ntBASIC7.33□□□□□ -1.24
PCDH1Q08174 AC027104.1-201ENST00000563702 681 ntBASIC7.33□□□□□ -1.24
PCDH1Q08174 PDCD6IPP2-207ENST00000566321 1069 ntBASIC7.33□□□□□ -1.24
PCDH1Q08174 KCTD2-206ENST00000581589 993 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
PCDH1Q08174 AC011472.3-201ENST00000586051 906 ntTSL 3 BASIC7.33□□□□□ -1.24
PCDH1Q08174 AC015911.3-201ENST00000592908 849 ntTSL 5 BASIC7.33□□□□□ -1.24
PCDH1Q08174 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC7.33□□□□□ -1.24
PCDH1Q08174 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC7.33□□□□□ -1.24
PCDH1Q08174 AP000436.1-201ENST00000605239 800 ntBASIC7.33□□□□□ -1.24
PCDH1Q08174 AC073389.2-201ENST00000606726 571 ntTSL 4 BASIC7.33□□□□□ -1.24
PCDH1Q08174 AC138904.2-201ENST00000614412 107 ntBASIC7.33□□□□□ -1.24
PCDH1Q08174 uc_338.33-201ENST00000614988 170 ntBASIC7.33□□□□□ -1.24
PCDH1Q08174 PFN1P2-202ENST00000621347 397 ntBASIC7.33□□□□□ -1.24
PCDH1Q08174 PTP4A1-206ENST00000627002 447 ntTSL 5 BASIC7.33□□□□□ -1.24
PCDH1Q08174 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC7.33□□□□□ -1.24
PCDH1Q08174 SAMMSON-214ENST00000641395 1264 ntBASIC7.33□□□□□ -1.24
PCDH1Q08174 SLC8A3-208ENST00000533541 3409 ntTSL 2 BASIC7.33□□□□□ -1.24
PCDH1Q08174 MAPK6-201ENST00000261845 5345 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
PCDH1Q08174 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
PCDH1Q08174 AC005840.3-201ENST00000541888 1803 ntTSL 5 BASIC7.33□□□□□ -1.24
PCDH1Q08174 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC7.33□□□□□ -1.24
PCDH1Q08174 NCAPH-205ENST00000455200 2952 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
PCDH1Q08174 IL1RAP-201ENST00000072516 4697 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
PCDH1Q08174 UBE2V1-202ENST00000371657 1973 ntTSL 4 BASIC7.33□□□□□ -1.24
PCDH1Q08174 ATM-215ENST00000530958 5718 ntTSL 2 BASIC7.33□□□□□ -1.24
PCDH1Q08174 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
PCDH1Q08174 MEF2C-232ENST00000629612 2851 ntTSL 5 BASIC7.33□□□□□ -1.24
PCDH1Q08174 ADAM2-201ENST00000265708 2672 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
PCDH1Q08174 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
PCDH1Q08174 SORBS1-208ENST00000371241 2055 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
PCDH1Q08174 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC7.32□□□□□ -1.24
PCDH1Q08174 ARHGAP42P4-201ENST00000549782 2934 ntBASIC7.32□□□□□ -1.24
PCDH1Q08174 RUNDC3A-AS1-202ENST00000588097 5203 ntTSL 5 BASIC7.32□□□□□ -1.24
PCDH1Q08174 ZFP2-202ENST00000520301 2043 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
PCDH1Q08174 SLFN13-209ENST00000533791 4121 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
PCDH1Q08174 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
PCDH1Q08174 ZFP2-205ENST00000523286 2154 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
PCDH1Q08174 ZFP42-203ENST00000618147 2338 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
PCDH1Q08174 ZNF10-202ENST00000402932 1967 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
PCDH1Q08174 OR4K1-201ENST00000285600 1076 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
PCDH1Q08174 ST3GAL3-213ENST00000372365 673 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
PCDH1Q08174 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
PCDH1Q08174 PHACTR1-204ENST00000379348 795 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
PCDH1Q08174 AC006511.2-201ENST00000388966 660 ntBASIC7.32□□□□□ -1.24
PCDH1Q08174 RNU4-74P-201ENST00000411280 161 ntBASIC7.32□□□□□ -1.24
PCDH1Q08174 AK4P4-201ENST00000419465 646 ntBASIC7.32□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms