Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
VBP1P61758 AC133552.1-201ENST00000569988 4007 ntBASIC5.56□□□□□ -1.52
VBP1P61758 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.56□□□□□ -1.52
VBP1P61758 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
VBP1P61758 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
VBP1P61758 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
VBP1P61758 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
VBP1P61758 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC5.56□□□□□ -1.52
VBP1P61758 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.56□□□□□ -1.52
VBP1P61758 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.55□□□□□ -1.52
VBP1P61758 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
VBP1P61758 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
VBP1P61758 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
VBP1P61758 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC5.55□□□□□ -1.52
VBP1P61758 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
VBP1P61758 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
VBP1P61758 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
VBP1P61758 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
VBP1P61758 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
VBP1P61758 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
VBP1P61758 DDX18P6-201ENST00000450119 1997 ntBASIC5.55□□□□□ -1.52
VBP1P61758 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
VBP1P61758 LYARP1-201ENST00000436977 1501 ntBASIC5.55□□□□□ -1.52
VBP1P61758 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.55□□□□□ -1.52
VBP1P61758 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
VBP1P61758 OR2AT4-201ENST00000305159 1042 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
VBP1P61758 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
VBP1P61758 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.55□□□□□ -1.52
VBP1P61758 UBBP1-201ENST00000392399 473 ntBASIC5.55□□□□□ -1.52
VBP1P61758 HNRNPCP2-201ENST00000399515 881 ntBASIC5.55□□□□□ -1.52
VBP1P61758 TYMSP1-201ENST00000407851 869 ntBASIC5.55□□□□□ -1.52
VBP1P61758 AL024497.1-201ENST00000412954 631 ntTSL 5 BASIC5.55□□□□□ -1.52
VBP1P61758 LINC01704-201ENST00000414848 834 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
VBP1P61758 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC5.55□□□□□ -1.52
VBP1P61758 AL929472.1-201ENST00000417484 429 ntBASIC5.55□□□□□ -1.52
VBP1P61758 SNRPEP5-201ENST00000425442 278 ntBASIC5.55□□□□□ -1.52
VBP1P61758 CICP10-201ENST00000439497 198 ntBASIC5.55□□□□□ -1.52
VBP1P61758 AC009970.1-201ENST00000444873 432 ntTSL 3 BASIC5.55□□□□□ -1.52
VBP1P61758 AL136115.1-201ENST00000447478 517 ntTSL 2 BASIC5.55□□□□□ -1.52
VBP1P61758 OR7E7P-201ENST00000455678 1012 ntBASIC5.55□□□□□ -1.52
VBP1P61758 RN7SL508P-201ENST00000464472 303 ntBASIC5.55□□□□□ -1.52
VBP1P61758 OR9A1P-202ENST00000484361 945 ntBASIC5.55□□□□□ -1.52
VBP1P61758 OR11I1P-201ENST00000486033 954 ntBASIC5.55□□□□□ -1.52
VBP1P61758 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.55□□□□□ -1.52
VBP1P61758 MORF4L2P1-201ENST00000503761 858 ntBASIC5.55□□□□□ -1.52
VBP1P61758 AL390198.2-201ENST00000510553 222 ntBASIC5.55□□□□□ -1.52
VBP1P61758 EIF3KP1-201ENST00000513279 656 ntBASIC5.55□□□□□ -1.52
VBP1P61758 ADI1P2-201ENST00000514945 429 ntBASIC5.55□□□□□ -1.52
VBP1P61758 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC5.55□□□□□ -1.52
VBP1P61758 AC090193.1-202ENST00000524355 566 ntTSL 4 BASIC5.55□□□□□ -1.52
VBP1P61758 AP006587.2-201ENST00000530696 493 ntBASIC5.55□□□□□ -1.52
VBP1P61758 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.55□□□□□ -1.52
VBP1P61758 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC5.55□□□□□ -1.52
VBP1P61758 AC244502.2-201ENST00000543361 851 ntBASIC5.55□□□□□ -1.52
VBP1P61758 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC5.55□□□□□ -1.52
VBP1P61758 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.55□□□□□ -1.52
VBP1P61758 AL049779.3-201ENST00000557141 606 ntBASIC5.55□□□□□ -1.52
VBP1P61758 AC013652.1-204ENST00000558209 489 ntTSL 3 BASIC5.55□□□□□ -1.52
VBP1P61758 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
VBP1P61758 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC5.55□□□□□ -1.52
VBP1P61758 WBP1LP11-201ENST00000586141 328 ntBASIC5.55□□□□□ -1.52
VBP1P61758 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC5.55□□□□□ -1.52
VBP1P61758 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.55□□□□□ -1.52
VBP1P61758 Metazoa_SRP.42-201ENST00000621081 348 ntBASIC5.55□□□□□ -1.52
VBP1P61758 AL669830.1-201ENST00000621457 656 ntBASIC5.55□□□□□ -1.52
VBP1P61758 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC5.55□□□□□ -1.52
VBP1P61758 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC5.55□□□□□ -1.52
VBP1P61758 FGL1-203ENST00000398054 1462 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
VBP1P61758 MTCO1P46-201ENST00000451639 1491 ntBASIC5.55□□□□□ -1.52
VBP1P61758 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
VBP1P61758 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.55□□□□□ -1.52
VBP1P61758 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
VBP1P61758 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
VBP1P61758 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.55□□□□□ -1.52
VBP1P61758 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
VBP1P61758 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
VBP1P61758 AC239868.2-201ENST00000564237 4527 ntBASIC5.55□□□□□ -1.52
VBP1P61758 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.55□□□□□ -1.52
VBP1P61758 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
VBP1P61758 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.54□□□□□ -1.52
VBP1P61758 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
VBP1P61758 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
VBP1P61758 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
VBP1P61758 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.54□□□□□ -1.52
VBP1P61758 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
VBP1P61758 PSMC1P6-201ENST00000477233 1319 ntBASIC5.54□□□□□ -1.52
VBP1P61758 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
VBP1P61758 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
VBP1P61758 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.54□□□□□ -1.52
VBP1P61758 CDY11P-201ENST00000447168 1651 ntBASIC5.54□□□□□ -1.52
VBP1P61758 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.54□□□□□ -1.52
VBP1P61758 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
VBP1P61758 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
VBP1P61758 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
VBP1P61758 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
VBP1P61758 OR5AU1-201ENST00000304418 1199 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
VBP1P61758 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
VBP1P61758 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
VBP1P61758 TRBV30-201ENST00000417977 447 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
VBP1P61758 LINC00869-202ENST00000430442 1065 ntTSL 5 BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms