Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC6.19□□□□□ -1.42
SUMO3P55854 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC6.19□□□□□ -1.42
SUMO3P55854 AC106782.7-201ENST00000624024 418 ntBASIC6.19□□□□□ -1.42
SUMO3P55854 AC133555.5-201ENST00000624430 418 ntBASIC6.19□□□□□ -1.42
SUMO3P55854 CYP2C8-213ENST00000628935 924 ntTSL 5 BASIC6.19□□□□□ -1.42
SUMO3P55854 Z83818.2-201ENST00000635331 433 ntTSL 3 BASIC6.19□□□□□ -1.42
SUMO3P55854 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
SUMO3P55854 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
SUMO3P55854 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SUMO3P55854 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC6.19□□□□□ -1.42
SUMO3P55854 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SUMO3P55854 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SUMO3P55854 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SUMO3P55854 MTMR7-201ENST00000180173 3850 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SUMO3P55854 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC6.19□□□□□ -1.42
SUMO3P55854 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SUMO3P55854 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC6.19□□□□□ -1.42
SUMO3P55854 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SUMO3P55854 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
SUMO3P55854 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SUMO3P55854 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC6.19□□□□□ -1.42
SUMO3P55854 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
SUMO3P55854 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC6.19□□□□□ -1.42
SUMO3P55854 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
SUMO3P55854 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
SUMO3P55854 ZNF806-201ENST00000438300 1774 ntBASIC6.18□□□□□ -1.42
SUMO3P55854 JPX-212ENST00000639185 9658 ntTSL 5 BASIC6.18□□□□□ -1.42
SUMO3P55854 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SUMO3P55854 OR7D2-201ENST00000344248 3224 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
SUMO3P55854 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SUMO3P55854 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SUMO3P55854 ARPP21-220ENST00000441454 2880 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SUMO3P55854 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC6.18□□□□□ -1.42
SUMO3P55854 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC6.18□□□□□ -1.42
SUMO3P55854 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC6.18□□□□□ -1.42
SUMO3P55854 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC6.18□□□□□ -1.42
SUMO3P55854 MTND5P23-201ENST00000430812 1655 ntBASIC6.18□□□□□ -1.42
SUMO3P55854 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC6.18□□□□□ -1.42
SUMO3P55854 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
SUMO3P55854 SNORA70.3-201ENST00000365075 132 ntBASIC6.18□□□□□ -1.42
SUMO3P55854 RNU1-55P-201ENST00000365510 158 ntBASIC6.18□□□□□ -1.42
SUMO3P55854 RNU6-31P-201ENST00000384388 108 ntBASIC6.18□□□□□ -1.42
SUMO3P55854 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
SUMO3P55854 AL079341.1-201ENST00000404701 1207 ntBASIC6.18□□□□□ -1.42
SUMO3P55854 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC6.18□□□□□ -1.42
SUMO3P55854 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC6.18□□□□□ -1.42
SUMO3P55854 AL713922.1-201ENST00000416477 747 ntBASIC6.18□□□□□ -1.42
SUMO3P55854 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC6.18□□□□□ -1.42
SUMO3P55854 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SUMO3P55854 TRBV26OR9-2-201ENST00000432077 293 ntBASIC6.18□□□□□ -1.42
SUMO3P55854 AC245452.2-201ENST00000435222 392 ntBASIC6.18□□□□□ -1.42
SUMO3P55854 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC6.18□□□□□ -1.42
SUMO3P55854 AC011742.2-201ENST00000443818 352 ntBASIC6.18□□□□□ -1.42
SUMO3P55854 AC016822.1-201ENST00000457975 439 ntTSL 3 BASIC6.18□□□□□ -1.42
SUMO3P55854 AC026254.2-201ENST00000475295 371 ntBASIC6.18□□□□□ -1.42
SUMO3P55854 AC005017.1-201ENST00000482002 490 ntBASIC6.18□□□□□ -1.42
SUMO3P55854 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC6.18□□□□□ -1.42
SUMO3P55854 AC096661.1-201ENST00000515870 822 ntBASIC6.18□□□□□ -1.42
SUMO3P55854 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC6.18□□□□□ -1.42
SUMO3P55854 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC6.18□□□□□ -1.42
SUMO3P55854 SNRPCP6-201ENST00000528310 210 ntBASIC6.18□□□□□ -1.42
SUMO3P55854 LDHC-204ENST00000536880 957 ntTSL 5 BASIC6.18□□□□□ -1.42
SUMO3P55854 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
SUMO3P55854 AC008126.1-201ENST00000549019 480 ntBASIC6.18□□□□□ -1.42
SUMO3P55854 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC6.18□□□□□ -1.42
SUMO3P55854 AC004232.1-201ENST00000571388 208 ntBASIC6.18□□□□□ -1.42
SUMO3P55854 CTSLP2-201ENST00000580501 394 ntBASIC6.18□□□□□ -1.42
SUMO3P55854 AC015818.6-201ENST00000584274 634 ntBASIC6.18□□□□□ -1.42
SUMO3P55854 AC023762.1-201ENST00000603280 584 ntBASIC6.18□□□□□ -1.42
SUMO3P55854 AC021851.1-201ENST00000608537 1082 ntBASIC6.18□□□□□ -1.42
SUMO3P55854 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC6.18□□□□□ -1.42
SUMO3P55854 Xist_exon4.1-201ENST00000615964 126 ntBASIC6.18□□□□□ -1.42
SUMO3P55854 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SUMO3P55854 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC6.18□□□□□ -1.42
SUMO3P55854 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC6.18□□□□□ -1.42
SUMO3P55854 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC6.18□□□□□ -1.42
SUMO3P55854 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SUMO3P55854 PBLD-204ENST00000358769 2587 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
SUMO3P55854 TRIM49-201ENST00000329758 2163 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
SUMO3P55854 TRIM49C-201ENST00000448984 2163 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SUMO3P55854 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SUMO3P55854 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SUMO3P55854 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
SUMO3P55854 MAPK10-357ENST00000641831 2858 ntBASIC6.18□□□□□ -1.42
SUMO3P55854 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SUMO3P55854 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
SUMO3P55854 AC074141.1-201ENST00000588129 2995 ntBASIC6.18□□□□□ -1.42
SUMO3P55854 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
SUMO3P55854 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC6.18□□□□□ -1.42
SUMO3P55854 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC6.18□□□□□ -1.42
SUMO3P55854 AADAC-201ENST00000232892 1642 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SUMO3P55854 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SUMO3P55854 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
SUMO3P55854 AC079298.1-201ENST00000625026 1619 ntBASIC6.17□□□□□ -1.42
SUMO3P55854 NRCAM-205ENST00000413765 6406 ntTSL 2 BASIC6.17□□□□□ -1.42
SUMO3P55854 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC6.17□□□□□ -1.42
SUMO3P55854 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SUMO3P55854 AC096992.2-201ENST00000609553 1684 ntBASIC6.17□□□□□ -1.42
SUMO3P55854 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SUMO3P55854 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms