Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 RN7SKP187-201ENST00000365536 330 ntBASIC6.46□□□□□ -1.38
CDH4P55283 MIR1275-201ENST00000408770 80 ntBASIC6.46□□□□□ -1.38
CDH4P55283 RNU2-18P-201ENST00000411224 162 ntBASIC6.46□□□□□ -1.38
CDH4P55283 CYP4F30P-202ENST00000420048 405 ntBASIC6.46□□□□□ -1.38
CDH4P55283 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC6.46□□□□□ -1.38
CDH4P55283 PLA2G12AP2-201ENST00000424744 264 ntBASIC6.46□□□□□ -1.38
CDH4P55283 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC6.46□□□□□ -1.38
CDH4P55283 RPS7P14-201ENST00000426405 583 ntBASIC6.46□□□□□ -1.38
CDH4P55283 IGLV3-4-201ENST00000432300 244 ntBASIC6.46□□□□□ -1.38
CDH4P55283 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC6.46□□□□□ -1.38
CDH4P55283 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC6.46□□□□□ -1.38
CDH4P55283 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC6.46□□□□□ -1.38
CDH4P55283 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC6.46□□□□□ -1.38
CDH4P55283 AL133351.3-201ENST00000454998 193 ntBASIC6.46□□□□□ -1.38
CDH4P55283 RN7SL254P-201ENST00000460609 284 ntBASIC6.46□□□□□ -1.38
CDH4P55283 RN7SL168P-201ENST00000463821 279 ntBASIC6.46□□□□□ -1.38
CDH4P55283 HMGN1P17-201ENST00000513734 295 ntBASIC6.46□□□□□ -1.38
CDH4P55283 NATP-201ENST00000523491 878 ntBASIC6.46□□□□□ -1.38
CDH4P55283 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CDH4P55283 AC002519.2-203ENST00000567043 837 ntBASIC6.46□□□□□ -1.38
CDH4P55283 AC004232.2-201ENST00000574245 821 ntBASIC6.46□□□□□ -1.38
CDH4P55283 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC6.46□□□□□ -1.38
CDH4P55283 MIR7109-201ENST00000613748 65 ntBASIC6.46□□□□□ -1.38
CDH4P55283 TEX41-271ENST00000628213 993 ntTSL 5 BASIC6.46□□□□□ -1.38
CDH4P55283 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC6.46□□□□□ -1.38
CDH4P55283 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC6.46□□□□□ -1.38
CDH4P55283 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC6.46□□□□□ -1.38
CDH4P55283 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CDH4P55283 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC6.46□□□□□ -1.38
CDH4P55283 CCAT2-201ENST00000630920 1752 ntBASIC6.46□□□□□ -1.38
CDH4P55283 AL391261.1-201ENST00000555712 1479 ntBASIC6.46□□□□□ -1.38
CDH4P55283 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CDH4P55283 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CDH4P55283 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
CDH4P55283 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC6.45□□□□□ -1.38
CDH4P55283 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
CDH4P55283 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
CDH4P55283 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC6.45□□□□□ -1.38
CDH4P55283 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
CDH4P55283 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
CDH4P55283 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC6.45□□□□□ -1.38
CDH4P55283 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC6.45□□□□□ -1.38
CDH4P55283 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CDH4P55283 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CDH4P55283 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
CDH4P55283 RNA5SP346-201ENST00000363541 121 ntBASIC6.45□□□□□ -1.38
CDH4P55283 RN7SKP237-201ENST00000364663 301 ntBASIC6.45□□□□□ -1.38
CDH4P55283 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CDH4P55283 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
CDH4P55283 RN7SKP144-201ENST00000411108 279 ntBASIC6.45□□□□□ -1.38
CDH4P55283 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC6.45□□□□□ -1.38
CDH4P55283 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CDH4P55283 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC6.45□□□□□ -1.38
CDH4P55283 AC092967.1-201ENST00000449016 481 ntBASIC6.45□□□□□ -1.38
CDH4P55283 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC6.45□□□□□ -1.38
CDH4P55283 AC021006.1-201ENST00000489849 553 ntBASIC6.45□□□□□ -1.38
CDH4P55283 AP002453.1-201ENST00000492327 668 ntBASIC6.45□□□□□ -1.38
CDH4P55283 AC023818.1-201ENST00000498379 384 ntBASIC6.45□□□□□ -1.38
CDH4P55283 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CDH4P55283 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC6.45□□□□□ -1.38
CDH4P55283 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC6.45□□□□□ -1.38
CDH4P55283 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC6.45□□□□□ -1.38
CDH4P55283 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC6.45□□□□□ -1.38
CDH4P55283 AC107958.1-201ENST00000556576 290 ntBASIC6.45□□□□□ -1.38
CDH4P55283 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC6.45□□□□□ -1.38
CDH4P55283 APOC2-205ENST00000592257 444 ntTSL 3 BASIC6.45□□□□□ -1.38
CDH4P55283 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC6.45□□□□□ -1.38
CDH4P55283 AC091193.1-201ENST00000604640 448 ntBASIC6.45□□□□□ -1.38
CDH4P55283 AC006924.1-201ENST00000610750 559 ntBASIC6.45□□□□□ -1.38
CDH4P55283 AC063952.1-203ENST00000634410 658 ntBASIC6.45□□□□□ -1.38
CDH4P55283 AL357140.4-201ENST00000636827 412 ntBASIC6.45□□□□□ -1.38
CDH4P55283 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC6.45□□□□□ -1.38
CDH4P55283 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CDH4P55283 AP001157.1-201ENST00000550837 2339 ntBASIC6.45□□□□□ -1.38
CDH4P55283 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC6.45□□□□□ -1.38
CDH4P55283 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
CDH4P55283 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CDH4P55283 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CDH4P55283 AC105749.1-201ENST00000631338 2008 ntBASIC6.45□□□□□ -1.38
CDH4P55283 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CDH4P55283 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
CDH4P55283 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC6.45□□□□□ -1.38
CDH4P55283 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
CDH4P55283 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CDH4P55283 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC6.44□□□□□ -1.38
CDH4P55283 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CDH4P55283 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CDH4P55283 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
CDH4P55283 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CDH4P55283 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CDH4P55283 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
CDH4P55283 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CDH4P55283 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC6.44□□□□□ -1.38
CDH4P55283 AP000866.6-201ENST00000638898 3579 ntBASIC6.44□□□□□ -1.38
CDH4P55283 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CDH4P55283 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CDH4P55283 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.44□□□□□ -1.38
CDH4P55283 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.44□□□□□ -1.38
CDH4P55283 RNU1-65P-201ENST00000363919 148 ntBASIC6.44□□□□□ -1.38
CDH4P55283 RPL24P2-201ENST00000421023 475 ntBASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 2874.6 ms