Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 AC092865.1-201ENST00000544395 1023 ntBASIC7.21□□□□□ -1.26
HMGCS2P54868 DCN-209ENST00000546745 1026 ntTSL 3 BASIC7.21□□□□□ -1.26
HMGCS2P54868 BICD1-206ENST00000551086 423 ntTSL 3 BASIC7.21□□□□□ -1.26
HMGCS2P54868 AL121579.2-201ENST00000555466 590 ntBASIC7.21□□□□□ -1.26
HMGCS2P54868 AC135626.1-201ENST00000556983 435 ntBASIC7.21□□□□□ -1.26
HMGCS2P54868 AC009120.3-201ENST00000563335 499 ntBASIC7.21□□□□□ -1.26
HMGCS2P54868 MRO-208ENST00000588444 866 ntTSL 3 BASIC7.21□□□□□ -1.26
HMGCS2P54868 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC7.21□□□□□ -1.26
HMGCS2P54868 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC7.21□□□□□ -1.26
HMGCS2P54868 OR7A11P-201ENST00000597719 953 ntBASIC7.21□□□□□ -1.26
HMGCS2P54868 AP005431.1-201ENST00000618479 319 ntBASIC7.21□□□□□ -1.26
HMGCS2P54868 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC7.21□□□□□ -1.26
HMGCS2P54868 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC7.21□□□□□ -1.26
HMGCS2P54868 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
HMGCS2P54868 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC7.21□□□□□ -1.26
HMGCS2P54868 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
HMGCS2P54868 APOL4-212ENST00000616056 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
HMGCS2P54868 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC7.21□□□□□ -1.26
HMGCS2P54868 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
HMGCS2P54868 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.26
HMGCS2P54868 AL590542.1-201ENST00000449314 1596 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
HMGCS2P54868 PBLD-204ENST00000358769 2587 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
HMGCS2P54868 AP003119.3-201ENST00000566747 4192 ntBASIC7.2□□□□□ -1.26
HMGCS2P54868 AL359195.2-201ENST00000623657 4412 ntBASIC7.2□□□□□ -1.26
HMGCS2P54868 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
HMGCS2P54868 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
HMGCS2P54868 AC024651.2-201ENST00000562480 2098 ntBASIC7.2□□□□□ -1.26
HMGCS2P54868 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
HMGCS2P54868 CREM-217ENST00000439705 2306 ntTSL 5 BASIC7.2□□□□□ -1.26
HMGCS2P54868 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
HMGCS2P54868 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
HMGCS2P54868 AL354890.1-201ENST00000413730 346 ntBASIC7.2□□□□□ -1.26
HMGCS2P54868 RPS7P8-201ENST00000418311 581 ntBASIC7.2□□□□□ -1.26
HMGCS2P54868 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC7.2□□□□□ -1.26
HMGCS2P54868 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC7.2□□□□□ -1.26
HMGCS2P54868 HMGN1P36-201ENST00000446623 298 ntBASIC7.2□□□□□ -1.26
HMGCS2P54868 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC7.2□□□□□ -1.26
HMGCS2P54868 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC7.2□□□□□ -1.26
HMGCS2P54868 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC7.2□□□□□ -1.26
HMGCS2P54868 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC7.2□□□□□ -1.26
HMGCS2P54868 STARD6-202ENST00000577499 696 ntTSL 2 BASIC7.2□□□□□ -1.26
HMGCS2P54868 AC009237.12-201ENST00000604755 742 ntBASIC7.2□□□□□ -1.26
HMGCS2P54868 MIR6809-201ENST00000612189 116 ntBASIC7.2□□□□□ -1.26
HMGCS2P54868 MIR6793-201ENST00000612376 63 ntBASIC7.2□□□□□ -1.26
HMGCS2P54868 MIR8089-201ENST00000620165 82 ntBASIC7.2□□□□□ -1.26
HMGCS2P54868 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC7.2□□□□□ -1.26
HMGCS2P54868 AC011416.1-201ENST00000514947 1732 ntBASIC7.2□□□□□ -1.26
HMGCS2P54868 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC7.2□□□□□ -1.26
HMGCS2P54868 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC7.2□□□□□ -1.26
HMGCS2P54868 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
HMGCS2P54868 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC7.19□□□□□ -1.26
HMGCS2P54868 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
HMGCS2P54868 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
HMGCS2P54868 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
HMGCS2P54868 XIST-206ENST00000434839 2865 ntTSL 5 BASIC7.19□□□□□ -1.26
HMGCS2P54868 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
HMGCS2P54868 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
HMGCS2P54868 GUCY1B2-204ENST00000531898 1979 ntBASIC7.19□□□□□ -1.26
HMGCS2P54868 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
HMGCS2P54868 UBE2V1-201ENST00000340309 2536 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
HMGCS2P54868 GDPD4-202ENST00000376217 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
HMGCS2P54868 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
HMGCS2P54868 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
HMGCS2P54868 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
HMGCS2P54868 MIR1203-201ENST00000408812 85 ntBASIC7.19□□□□□ -1.26
HMGCS2P54868 BX323845.3-201ENST00000428215 527 ntBASIC7.19□□□□□ -1.26
HMGCS2P54868 FTH1P10-202ENST00000430907 550 ntBASIC7.19□□□□□ -1.26
HMGCS2P54868 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC7.19□□□□□ -1.26
HMGCS2P54868 RPL36AP39-201ENST00000445859 318 ntBASIC7.19□□□□□ -1.26
HMGCS2P54868 AP006222.1-205ENST00000450734 457 ntBASIC7.19□□□□□ -1.26
HMGCS2P54868 AGK-205ENST00000492693 1046 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
HMGCS2P54868 AC084337.1-201ENST00000524809 686 ntBASIC7.19□□□□□ -1.26
HMGCS2P54868 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
HMGCS2P54868 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC7.19□□□□□ -1.26
HMGCS2P54868 LAPTM4BP2-201ENST00000604542 446 ntBASIC7.19□□□□□ -1.26
HMGCS2P54868 AC006924.1-201ENST00000610750 559 ntBASIC7.19□□□□□ -1.26
HMGCS2P54868 AL512624.1-201ENST00000613638 469 ntBASIC7.19□□□□□ -1.26
HMGCS2P54868 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC7.19□□□□□ -1.26
HMGCS2P54868 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
HMGCS2P54868 DLG2-203ENST00000376104 5139 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
HMGCS2P54868 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
HMGCS2P54868 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC7.19□□□□□ -1.26
HMGCS2P54868 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC7.18□□□□□ -1.26
HMGCS2P54868 AC015689.2-201ENST00000528172 1738 ntBASIC7.18□□□□□ -1.26
HMGCS2P54868 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
HMGCS2P54868 LIMCH1-201ENST00000313860 6165 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
HMGCS2P54868 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC7.18□□□□□ -1.26
HMGCS2P54868 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC7.18□□□□□ -1.26
HMGCS2P54868 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC7.18□□□□□ -1.26
HMGCS2P54868 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
HMGCS2P54868 ODF2L-201ENST00000294678 4267 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
HMGCS2P54868 GABRR1-203ENST00000454853 2820 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
HMGCS2P54868 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
HMGCS2P54868 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
HMGCS2P54868 EEF1B2P8-201ENST00000414101 671 ntBASIC7.18□□□□□ -1.26
HMGCS2P54868 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC7.18□□□□□ -1.26
HMGCS2P54868 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC7.18□□□□□ -1.26
HMGCS2P54868 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC7.18□□□□□ -1.26
HMGCS2P54868 AL355355.1-201ENST00000442900 793 ntBASIC7.18□□□□□ -1.26
HMGCS2P54868 GAPDHP23-201ENST00000444823 993 ntBASIC7.18□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms