Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 VN1R25P-201ENST00000443385 738 ntBASIC7.52□□□□□ -1.21
PMS1P54277 LINC01961-201ENST00000449954 745 ntTSL 5 BASIC7.52□□□□□ -1.21
PMS1P54277 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC7.52□□□□□ -1.21
PMS1P54277 VN1R40P-201ENST00000455196 941 ntBASIC7.52□□□□□ -1.21
PMS1P54277 NMNAT1P3-201ENST00000457517 888 ntBASIC7.52□□□□□ -1.21
PMS1P54277 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC7.52□□□□□ -1.21
PMS1P54277 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC7.52□□□□□ -1.21
PMS1P54277 AC020779.1-201ENST00000478757 796 ntBASIC7.52□□□□□ -1.21
PMS1P54277 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC7.52□□□□□ -1.21
PMS1P54277 LINC01262-201ENST00000513681 879 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
PMS1P54277 RN7SKP98-201ENST00000517070 156 ntBASIC7.52□□□□□ -1.21
PMS1P54277 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC7.52□□□□□ -1.21
PMS1P54277 TDGP1-201ENST00000543961 1229 ntBASIC7.52□□□□□ -1.21
PMS1P54277 AC069234.3-201ENST00000544939 569 ntTSL 4 BASIC7.52□□□□□ -1.21
PMS1P54277 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC7.52□□□□□ -1.21
PMS1P54277 AC015908.3-202ENST00000579367 457 ntTSL 2 BASIC7.52□□□□□ -1.21
PMS1P54277 MIR4428-201ENST00000584884 73 ntBASIC7.52□□□□□ -1.21
PMS1P54277 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC7.52□□□□□ -1.21
PMS1P54277 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC7.52□□□□□ -1.21
PMS1P54277 AC091768.1-201ENST00000609258 930 ntBASIC7.52□□□□□ -1.21
PMS1P54277 Six3os1_1.1-201ENST00000620900 87 ntBASIC7.52□□□□□ -1.21
PMS1P54277 AL512506.2-201ENST00000624472 458 ntBASIC7.52□□□□□ -1.21
PMS1P54277 SALL4P7-201ENST00000555779 3120 ntBASIC7.52□□□□□ -1.21
PMS1P54277 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
PMS1P54277 SLC11A2-201ENST00000262051 3986 ntAPPRIS ALT1 TSL 1 (best) BASIC7.52□□□□□ -1.21
PMS1P54277 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.21
PMS1P54277 MEF2C-210ENST00000506554 3469 ntTSL 5 BASIC7.52□□□□□ -1.21
PMS1P54277 OAS2-202ENST00000392583 4734 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
PMS1P54277 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC7.52□□□□□ -1.21
PMS1P54277 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
PMS1P54277 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
PMS1P54277 AL513185.3-201ENST00000433335 1300 ntBASIC7.52□□□□□ -1.21
PMS1P54277 QRSL1P3-201ENST00000552666 1316 ntBASIC7.52□□□□□ -1.21
PMS1P54277 AC119674.1-204ENST00000641348 1343 ntBASIC7.52□□□□□ -1.21
PMS1P54277 AC106712.1-201ENST00000483840 1888 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
PMS1P54277 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
PMS1P54277 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
PMS1P54277 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC7.51□□□□□ -1.21
PMS1P54277 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
PMS1P54277 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
PMS1P54277 KYNU-203ENST00000409512 1576 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
PMS1P54277 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
PMS1P54277 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC7.51□□□□□ -1.21
PMS1P54277 LINC01103-201ENST00000430551 1457 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
PMS1P54277 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC7.51□□□□□ -1.21
PMS1P54277 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC7.51□□□□□ -1.21
PMS1P54277 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
PMS1P54277 RAD1P1-201ENST00000231383 813 ntBASIC7.51□□□□□ -1.21
PMS1P54277 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
PMS1P54277 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
PMS1P54277 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC7.51□□□□□ -1.21
PMS1P54277 RNU6-906P-201ENST00000384700 70 ntBASIC7.51□□□□□ -1.21
PMS1P54277 MIR301B-201ENST00000390813 78 ntBASIC7.51□□□□□ -1.21
PMS1P54277 CASP3-203ENST00000393588 677 ntTSL 4 BASIC7.51□□□□□ -1.21
PMS1P54277 NPPA-AS1-201ENST00000400892 936 ntTSL 3 BASIC7.51□□□□□ -1.21
PMS1P54277 SOD1P1-201ENST00000407803 440 ntBASIC7.51□□□□□ -1.21
PMS1P54277 UNC50-203ENST00000409347 1276 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
PMS1P54277 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
PMS1P54277 RNA5SP280-201ENST00000411230 115 ntBASIC7.51□□□□□ -1.21
PMS1P54277 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC7.51□□□□□ -1.21
PMS1P54277 MEG8-201ENST00000414488 800 ntTSL 3 BASIC7.51□□□□□ -1.21
PMS1P54277 AL451164.1-201ENST00000417149 390 ntTSL 3 BASIC7.51□□□□□ -1.21
PMS1P54277 EIF4A1P2-201ENST00000422633 1220 ntBASIC7.51□□□□□ -1.21
PMS1P54277 GAPDHP69-201ENST00000425504 1008 ntBASIC7.51□□□□□ -1.21
PMS1P54277 GTF2A1-202ENST00000434192 1199 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
PMS1P54277 LINC00271-203ENST00000438618 1202 ntTSL 3 BASIC7.51□□□□□ -1.21
PMS1P54277 GOT2P2-201ENST00000450663 1251 ntBASIC7.51□□□□□ -1.21
PMS1P54277 PCMTD1P3-201ENST00000451824 472 ntBASIC7.51□□□□□ -1.21
PMS1P54277 RPL23AP23-201ENST00000452590 471 ntBASIC7.51□□□□□ -1.21
PMS1P54277 AC092155.2-201ENST00000454675 477 ntBASIC7.51□□□□□ -1.21
PMS1P54277 SULT1D1P-201ENST00000458020 882 ntBASIC7.51□□□□□ -1.21
PMS1P54277 AC004263.1-201ENST00000479327 332 ntBASIC7.51□□□□□ -1.21
PMS1P54277 AC116562.1-201ENST00000485355 781 ntBASIC7.51□□□□□ -1.21
PMS1P54277 RN7SL518P-201ENST00000491887 280 ntBASIC7.51□□□□□ -1.21
PMS1P54277 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC7.51□□□□□ -1.21
PMS1P54277 TECRP2-201ENST00000503270 928 ntBASIC7.51□□□□□ -1.21
PMS1P54277 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC7.51□□□□□ -1.21
PMS1P54277 ASNSP4-201ENST00000511103 447 ntBASIC7.51□□□□□ -1.21
PMS1P54277 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC7.51□□□□□ -1.21
PMS1P54277 CASP1P2-201ENST00000526830 1258 ntBASIC7.51□□□□□ -1.21
PMS1P54277 AC092375.1-201ENST00000550410 637 ntBASIC7.51□□□□□ -1.21
PMS1P54277 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC7.51□□□□□ -1.21
PMS1P54277 AC009097.3-201ENST00000563557 1018 ntBASIC7.51□□□□□ -1.21
PMS1P54277 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC7.51□□□□□ -1.21
PMS1P54277 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC7.51□□□□□ -1.21
PMS1P54277 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC7.51□□□□□ -1.21
PMS1P54277 AC005951.1-201ENST00000576706 485 ntBASIC7.51□□□□□ -1.21
PMS1P54277 MIR5095-201ENST00000578844 88 ntBASIC7.51□□□□□ -1.21
PMS1P54277 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC7.51□□□□□ -1.21
PMS1P54277 AC007255.2-201ENST00000604053 631 ntBASIC7.51□□□□□ -1.21
PMS1P54277 AL049829.3-202ENST00000604278 711 ntBASIC7.51□□□□□ -1.21
PMS1P54277 AC099785.1-201ENST00000605697 437 ntBASIC7.51□□□□□ -1.21
PMS1P54277 AC004908.1-201ENST00000606572 541 ntBASIC7.51□□□□□ -1.21
PMS1P54277 AL356752.1-201ENST00000615844 593 ntBASIC7.51□□□□□ -1.21
PMS1P54277 AC025287.2-201ENST00000621911 668 ntBASIC7.51□□□□□ -1.21
PMS1P54277 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC7.51□□□□□ -1.21
PMS1P54277 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC7.51□□□□□ -1.21
PMS1P54277 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
PMS1P54277 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC7.51□□□□□ -1.21
PMS1P54277 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms