Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
LHX1P48742 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.67□□□□□ -1.34
LHX1P48742 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
LHX1P48742 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.67□□□□□ -1.34
LHX1P48742 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
LHX1P48742 AL592430.1-202ENST00000414383 1546 ntTSL 3 BASIC6.67□□□□□ -1.34
LHX1P48742 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC6.67□□□□□ -1.34
LHX1P48742 AL157831.2-201ENST00000564681 3095 ntBASIC6.67□□□□□ -1.34
LHX1P48742 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC6.67□□□□□ -1.34
LHX1P48742 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC6.67□□□□□ -1.34
LHX1P48742 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
LHX1P48742 OR56A4-201ENST00000330728 1209 ntBASIC6.67□□□□□ -1.34
LHX1P48742 RNU1-49P-201ENST00000363468 159 ntBASIC6.67□□□□□ -1.34
LHX1P48742 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
LHX1P48742 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
LHX1P48742 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC6.67□□□□□ -1.34
LHX1P48742 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC6.67□□□□□ -1.34
LHX1P48742 CYP4F30P-202ENST00000420048 405 ntBASIC6.67□□□□□ -1.34
LHX1P48742 AL451136.1-201ENST00000435399 325 ntBASIC6.67□□□□□ -1.34
LHX1P48742 KRTAP2-5P-201ENST00000446109 396 ntBASIC6.67□□□□□ -1.34
LHX1P48742 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC6.67□□□□□ -1.34
LHX1P48742 RANP2-201ENST00000456833 229 ntBASIC6.67□□□□□ -1.34
LHX1P48742 AC009963.3-201ENST00000458090 486 ntBASIC6.67□□□□□ -1.34
LHX1P48742 RPL34P33-201ENST00000486062 334 ntBASIC6.67□□□□□ -1.34
LHX1P48742 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC6.67□□□□□ -1.34
LHX1P48742 AC090958.1-201ENST00000511122 351 ntBASIC6.67□□□□□ -1.34
LHX1P48742 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC6.67□□□□□ -1.34
LHX1P48742 KCTD9P4-201ENST00000526766 1166 ntBASIC6.67□□□□□ -1.34
LHX1P48742 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
LHX1P48742 AP001858.2-201ENST00000536213 601 ntBASIC6.67□□□□□ -1.34
LHX1P48742 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC6.67□□□□□ -1.34
LHX1P48742 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC6.67□□□□□ -1.34
LHX1P48742 DYNLL1P1-201ENST00000595442 269 ntBASIC6.67□□□□□ -1.34
LHX1P48742 AL445649.1-201ENST00000615941 691 ntBASIC6.67□□□□□ -1.34
LHX1P48742 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC6.67□□□□□ -1.34
LHX1P48742 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
LHX1P48742 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
LHX1P48742 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC6.67□□□□□ -1.34
LHX1P48742 AC007114.2-201ENST00000576014 4281 ntBASIC6.67□□□□□ -1.34
LHX1P48742 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
LHX1P48742 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
LHX1P48742 EEF1A1P9-201ENST00000514975 1383 ntBASIC6.67□□□□□ -1.34
LHX1P48742 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC6.67□□□□□ -1.34
LHX1P48742 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
LHX1P48742 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
LHX1P48742 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
LHX1P48742 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC6.66□□□□□ -1.34
LHX1P48742 AC104966.1-201ENST00000467010 1464 ntBASIC6.66□□□□□ -1.34
LHX1P48742 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
LHX1P48742 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
LHX1P48742 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
LHX1P48742 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
LHX1P48742 CREM-217ENST00000439705 2306 ntTSL 5 BASIC6.66□□□□□ -1.34
LHX1P48742 AC027575.3-201ENST00000583058 2747 ntBASIC6.66□□□□□ -1.34
LHX1P48742 CDY5P-201ENST00000411487 1580 ntBASIC6.66□□□□□ -1.34
LHX1P48742 CDY9P-201ENST00000451397 1580 ntBASIC6.66□□□□□ -1.34
LHX1P48742 HSPD1P9-201ENST00000420325 1636 ntBASIC6.66□□□□□ -1.34
LHX1P48742 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
LHX1P48742 AL133243.2-201ENST00000610331 1621 ntBASIC6.66□□□□□ -1.34
LHX1P48742 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
LHX1P48742 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
LHX1P48742 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
LHX1P48742 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
LHX1P48742 AL355994.1-201ENST00000424379 260 ntBASIC6.66□□□□□ -1.34
LHX1P48742 AC007679.3-201ENST00000434035 414 ntBASIC6.66□□□□□ -1.34
LHX1P48742 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC6.66□□□□□ -1.34
LHX1P48742 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC6.66□□□□□ -1.34
LHX1P48742 AC009879.1-201ENST00000520029 839 ntBASIC6.66□□□□□ -1.34
LHX1P48742 TOMM20P1-201ENST00000534518 427 ntBASIC6.66□□□□□ -1.34
LHX1P48742 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC6.66□□□□□ -1.34
LHX1P48742 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC6.66□□□□□ -1.34
LHX1P48742 MRPS21P8-201ENST00000569196 235 ntBASIC6.66□□□□□ -1.34
LHX1P48742 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC6.66□□□□□ -1.34
LHX1P48742 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
LHX1P48742 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC6.66□□□□□ -1.34
LHX1P48742 TCL6_3.1-201ENST00000619064 137 ntBASIC6.66□□□□□ -1.34
LHX1P48742 CASC22-202ENST00000628396 802 ntTSL 5 BASIC6.66□□□□□ -1.34
LHX1P48742 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC6.66□□□□□ -1.34
LHX1P48742 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
LHX1P48742 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
LHX1P48742 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
LHX1P48742 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.66□□□□□ -1.34
LHX1P48742 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC6.66□□□□□ -1.34
LHX1P48742 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.66□□□□□ -1.34
LHX1P48742 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC6.66□□□□□ -1.34
LHX1P48742 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.66□□□□□ -1.34
LHX1P48742 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
LHX1P48742 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC6.65□□□□□ -1.34
LHX1P48742 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.65□□□□□ -1.34
LHX1P48742 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
LHX1P48742 AL033543.1-201ENST00000623440 13454 ntBASIC6.65□□□□□ -1.34
LHX1P48742 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC6.65□□□□□ -1.34
LHX1P48742 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC6.65□□□□□ -1.34
LHX1P48742 FGG-201ENST00000336098 1659 ntTSL 2 BASIC6.65□□□□□ -1.34
LHX1P48742 AC107980.1-201ENST00000558671 3355 ntBASIC6.65□□□□□ -1.34
LHX1P48742 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
LHX1P48742 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC6.65□□□□□ -1.34
LHX1P48742 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
LHX1P48742 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.65□□□□□ -1.34
LHX1P48742 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms