Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 AC021001.1-201ENST00000518703 987 ntBASIC8.17□□□□□ -1.1
VARSP26640 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC8.17□□□□□ -1.1
VARSP26640 FLJ46284-203ENST00000521230 407 ntTSL 3 BASIC8.17□□□□□ -1.1
VARSP26640 AP000619.1-201ENST00000540293 1000 ntBASIC8.17□□□□□ -1.1
VARSP26640 TMEM106C-212ENST00000549288 321 ntTSL 3 BASIC8.17□□□□□ -1.1
VARSP26640 COPZ1-215ENST00000552362 575 ntTSL 4 BASIC8.17□□□□□ -1.1
VARSP26640 MPPE1P1-201ENST00000557286 1076 ntBASIC8.17□□□□□ -1.1
VARSP26640 AC087477.6-201ENST00000559595 843 ntBASIC8.17□□□□□ -1.1
VARSP26640 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC8.17□□□□□ -1.1
VARSP26640 AC009154.1-201ENST00000565822 508 ntTSL 3 BASIC8.17□□□□□ -1.1
VARSP26640 RPS3AP23-202ENST00000574601 686 ntBASIC8.17□□□□□ -1.1
VARSP26640 AC091180.5-201ENST00000576461 382 ntTSL 5 BASIC8.17□□□□□ -1.1
VARSP26640 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC8.17□□□□□ -1.1
VARSP26640 KCNMA1-AS1-204ENST00000595702 504 ntTSL 5 BASIC8.17□□□□□ -1.1
VARSP26640 AC010323.2-201ENST00000596405 594 ntBASIC8.17□□□□□ -1.1
VARSP26640 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
VARSP26640 AC073218.2-201ENST00000606468 295 ntTSL 5 BASIC8.17□□□□□ -1.1
VARSP26640 RN7SL760P-201ENST00000607344 270 ntBASIC8.17□□□□□ -1.1
VARSP26640 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
VARSP26640 MESTIT1_2.1-201ENST00000616328 235 ntBASIC8.17□□□□□ -1.1
VARSP26640 CD200R1L-205ENST00000617549 762 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
VARSP26640 Metazoa_SRP.115-201ENST00000619303 284 ntBASIC8.17□□□□□ -1.1
VARSP26640 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
VARSP26640 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC8.17□□□□□ -1.1
VARSP26640 CRB1-202ENST00000367399 3885 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
VARSP26640 ZSCAN16-201ENST00000340487 1328 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
VARSP26640 MAP4-210ENST00000439356 2743 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
VARSP26640 EIF4E3-204ENST00000425534 9949 ntAPPRIS P1 TSL 2 BASIC8.17□□□□□ -1.1
VARSP26640 GIMAP2-201ENST00000223293 1449 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
VARSP26640 AL022578.1-201ENST00000439330 1433 ntBASIC8.17□□□□□ -1.1
VARSP26640 TMEM267-202ENST00000500337 2950 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
VARSP26640 AC008817.1-201ENST00000504215 1562 ntBASIC8.17□□□□□ -1.1
VARSP26640 CPEB4-209ENST00000522336 1551 ntTSL 5 BASIC8.17□□□□□ -1.1
VARSP26640 MAP3K13-203ENST00000424227 3156 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
VARSP26640 FAM120B-203ENST00000537664 3212 ntAPPRIS ALT2 TSL 2 BASIC8.17□□□□□ -1.1
VARSP26640 AL645937.1-201ENST00000641739 1652 ntBASIC8.17□□□□□ -1.1
VARSP26640 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
VARSP26640 CDKL5-201ENST00000379989 3463 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
VARSP26640 WDR87-202ENST00000447313 9009 ntAPPRIS ALT2 TSL 2 BASIC8.17□□□□□ -1.1
VARSP26640 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC8.17□□□□□ -1.1
VARSP26640 SND1-IT1-201ENST00000623342 2481 ntBASIC8.17□□□□□ -1.1
VARSP26640 ZNF334-206ENST00000625284 2495 ntAPPRIS ALT2 TSL 2 BASIC8.17□□□□□ -1.1
VARSP26640 OR5AU1-202ENST00000641039 8232 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
VARSP26640 AC117382.2-201ENST00000564748 3151 ntBASIC8.16□□□□□ -1.1
VARSP26640 AC103591.2-201ENST00000265259 766 ntBASIC8.16□□□□□ -1.1
VARSP26640 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
VARSP26640 MAP3K20-201ENST00000338983 7179 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
VARSP26640 SLC17A2-202ENST00000360488 2270 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
VARSP26640 PLAGL1-202ENST00000360537 4430 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
VARSP26640 CD46-208ENST00000367042 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
VARSP26640 TMEM244-201ENST00000368143 545 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
VARSP26640 BMS1P1-201ENST00000374336 1332 ntBASIC8.16□□□□□ -1.1
VARSP26640 TRBV6-1-201ENST00000390353 401 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
VARSP26640 CHODL-203ENST00000400127 2239 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
VARSP26640 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC8.16□□□□□ -1.1
VARSP26640 HMGB3P23-201ENST00000414981 585 ntBASIC8.16□□□□□ -1.1
VARSP26640 AC008937.2-201ENST00000415589 619 ntTSL 3 BASIC8.16□□□□□ -1.1
VARSP26640 AC007390.1-201ENST00000415722 356 ntBASIC8.16□□□□□ -1.1
VARSP26640 RPL3P4-201ENST00000417615 423 ntBASIC8.16□□□□□ -1.1
VARSP26640 AL121878.1-201ENST00000418638 859 ntBASIC8.16□□□□□ -1.1
VARSP26640 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC8.16□□□□□ -1.1
VARSP26640 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC8.16□□□□□ -1.1
VARSP26640 AC009237.2-201ENST00000421358 284 ntBASIC8.16□□□□□ -1.1
VARSP26640 AC007742.1-201ENST00000425789 329 ntBASIC8.16□□□□□ -1.1
VARSP26640 MIR181A2HG-201ENST00000429139 662 ntTSL 2 BASIC8.16□□□□□ -1.1
VARSP26640 AC112493.1-202ENST00000436019 673 ntTSL 3 BASIC8.16□□□□□ -1.1
VARSP26640 ELOCP26-201ENST00000436067 329 ntBASIC8.16□□□□□ -1.1
VARSP26640 NIPA1-202ENST00000437912 7613 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
VARSP26640 AC105942.1-202ENST00000438509 952 ntTSL 3 BASIC8.16□□□□□ -1.1
VARSP26640 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC8.16□□□□□ -1.1
VARSP26640 AL772284.1-201ENST00000443421 905 ntBASIC8.16□□□□□ -1.1
VARSP26640 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC8.16□□□□□ -1.1
VARSP26640 AC034238.2-201ENST00000445660 567 ntTSL 4 BASIC8.16□□□□□ -1.1
VARSP26640 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC8.16□□□□□ -1.1
VARSP26640 RN7SL745P-201ENST00000484900 299 ntBASIC8.16□□□□□ -1.1
VARSP26640 RPS3P7-201ENST00000488662 726 ntBASIC8.16□□□□□ -1.1
VARSP26640 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC8.16□□□□□ -1.1
VARSP26640 HNRNPA1P44-201ENST00000503999 879 ntBASIC8.16□□□□□ -1.1
VARSP26640 AC018710.1-201ENST00000506509 158 ntBASIC8.16□□□□□ -1.1
VARSP26640 MEF2C-210ENST00000506554 3469 ntTSL 5 BASIC8.16□□□□□ -1.1
VARSP26640 TTC39B-206ENST00000507285 2243 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
VARSP26640 AC091133.4-201ENST00000511142 308 ntBASIC8.16□□□□□ -1.1
VARSP26640 OSGEPL1-204ENST00000519810 2216 ntTSL 2 BASIC8.16□□□□□ -1.1
VARSP26640 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC8.16□□□□□ -1.1
VARSP26640 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC8.16□□□□□ -1.1
VARSP26640 AP003080.1-202ENST00000526526 915 ntBASIC8.16□□□□□ -1.1
VARSP26640 NDFIP1P1-201ENST00000543144 525 ntBASIC8.16□□□□□ -1.1
VARSP26640 STXBP6-204ENST00000546511 1223 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
VARSP26640 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC8.16□□□□□ -1.1
VARSP26640 AC034102.1-201ENST00000552016 604 ntBASIC8.16□□□□□ -1.1
VARSP26640 AC044913.1-201ENST00000557200 430 ntBASIC8.16□□□□□ -1.1
VARSP26640 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC8.16□□□□□ -1.1
VARSP26640 AC125421.2-202ENST00000580776 477 ntTSL 3 BASIC8.16□□□□□ -1.1
VARSP26640 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC8.16□□□□□ -1.1
VARSP26640 EDRF1-AS1-205ENST00000601363 712 ntTSL 5 BASIC8.16□□□□□ -1.1
VARSP26640 FAM205C-203ENST00000603640 1017 ntAPPRIS P4 TSL 5 BASIC8.16□□□□□ -1.1
VARSP26640 AC104117.5-201ENST00000606195 547 ntBASIC8.16□□□□□ -1.1
VARSP26640 AC099676.1-201ENST00000608886 657 ntBASIC8.16□□□□□ -1.1
VARSP26640 MIR6872-201ENST00000612981 62 ntBASIC8.16□□□□□ -1.1
VARSP26640 MED24-234ENST00000614384 454 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 146.2 ms