Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC7.99□□□□□ -1.13
HMGB1P09429 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC7.99□□□□□ -1.13
HMGB1P09429 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC7.99□□□□□ -1.13
HMGB1P09429 AC073365.1-203ENST00000641055 1992 ntBASIC7.99□□□□□ -1.13
HMGB1P09429 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
HMGB1P09429 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
HMGB1P09429 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC7.99□□□□□ -1.13
HMGB1P09429 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC7.99□□□□□ -1.13
HMGB1P09429 RPL7AP14-201ENST00000424041 802 ntBASIC7.99□□□□□ -1.13
HMGB1P09429 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC7.99□□□□□ -1.13
HMGB1P09429 CHCHD4P5-201ENST00000436684 427 ntBASIC7.99□□□□□ -1.13
HMGB1P09429 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC7.99□□□□□ -1.13
HMGB1P09429 PSMC1P13-201ENST00000458195 985 ntBASIC7.99□□□□□ -1.13
HMGB1P09429 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC7.99□□□□□ -1.13
HMGB1P09429 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC7.99□□□□□ -1.13
HMGB1P09429 OR52A4P-202ENST00000481634 799 ntBASIC7.99□□□□□ -1.13
HMGB1P09429 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC7.99□□□□□ -1.13
HMGB1P09429 AC093895.1-201ENST00000506480 821 ntTSL 3 BASIC7.99□□□□□ -1.13
HMGB1P09429 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC7.99□□□□□ -1.13
HMGB1P09429 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC7.99□□□□□ -1.13
HMGB1P09429 AC103855.4-201ENST00000533158 265 ntBASIC7.99□□□□□ -1.13
HMGB1P09429 AC156455.1-201ENST00000538790 851 ntTSL 2 BASIC7.99□□□□□ -1.13
HMGB1P09429 C1GALT1P1-201ENST00000548895 1089 ntBASIC7.99□□□□□ -1.13
HMGB1P09429 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC7.99□□□□□ -1.13
HMGB1P09429 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
HMGB1P09429 AL512605.1-201ENST00000588215 1263 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
HMGB1P09429 ZNF431-203ENST00000594425 610 ntTSL 2 BASIC7.99□□□□□ -1.13
HMGB1P09429 AP002345.2-201ENST00000609961 904 ntBASIC7.99□□□□□ -1.13
HMGB1P09429 PTCHD3P1-201ENST00000612350 537 ntBASIC7.99□□□□□ -1.13
HMGB1P09429 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC7.99□□□□□ -1.13
HMGB1P09429 FP325318.1-201ENST00000616097 1263 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
HMGB1P09429 AC097461.1-201ENST00000568928 2821 ntBASIC7.99□□□□□ -1.13
HMGB1P09429 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC7.99□□□□□ -1.13
HMGB1P09429 CYP2G2P-201ENST00000594920 1485 ntBASIC7.99□□□□□ -1.13
HMGB1P09429 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
HMGB1P09429 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
HMGB1P09429 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC7.99□□□□□ -1.13
HMGB1P09429 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
HMGB1P09429 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC7.98□□□□□ -1.13
HMGB1P09429 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
HMGB1P09429 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
HMGB1P09429 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC7.98□□□□□ -1.13
HMGB1P09429 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
HMGB1P09429 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
HMGB1P09429 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
HMGB1P09429 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
HMGB1P09429 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC7.98□□□□□ -1.13
HMGB1P09429 TAAR2-202ENST00000367931 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
HMGB1P09429 S100A7-202ENST00000368723 479 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
HMGB1P09429 RNU6-31P-201ENST00000384388 108 ntBASIC7.98□□□□□ -1.13
HMGB1P09429 AC007349.3-201ENST00000415356 872 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
HMGB1P09429 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC7.98□□□□□ -1.13
HMGB1P09429 LINC00575-201ENST00000426551 910 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
HMGB1P09429 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC7.98□□□□□ -1.13
HMGB1P09429 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC7.98□□□□□ -1.13
HMGB1P09429 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC7.98□□□□□ -1.13
HMGB1P09429 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC7.98□□□□□ -1.13
HMGB1P09429 AC025181.1-201ENST00000477507 416 ntBASIC7.98□□□□□ -1.13
HMGB1P09429 RPL7AP30-201ENST00000482859 796 ntBASIC7.98□□□□□ -1.13
HMGB1P09429 AC015864.1-201ENST00000496512 544 ntBASIC7.98□□□□□ -1.13
HMGB1P09429 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC7.98□□□□□ -1.13
HMGB1P09429 AC093770.1-201ENST00000511559 571 ntBASIC7.98□□□□□ -1.13
HMGB1P09429 RNA5SP75-201ENST00000516841 111 ntBASIC7.98□□□□□ -1.13
HMGB1P09429 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC7.98□□□□□ -1.13
HMGB1P09429 AP005902.2-201ENST00000518393 307 ntBASIC7.98□□□□□ -1.13
HMGB1P09429 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC7.98□□□□□ -1.13
HMGB1P09429 AC140063.1-201ENST00000541343 259 ntBASIC7.98□□□□□ -1.13
HMGB1P09429 AC009729.1-201ENST00000548873 1133 ntBASIC7.98□□□□□ -1.13
HMGB1P09429 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC7.98□□□□□ -1.13
HMGB1P09429 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC7.98□□□□□ -1.13
HMGB1P09429 LINC01917-201ENST00000565170 1037 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
HMGB1P09429 AP001496.3-201ENST00000580230 913 ntBASIC7.98□□□□□ -1.13
HMGB1P09429 CCL2-202ENST00000580907 736 ntTSL 2 BASIC7.98□□□□□ -1.13
HMGB1P09429 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC7.98□□□□□ -1.13
HMGB1P09429 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC7.98□□□□□ -1.13
HMGB1P09429 DIMT1P1-201ENST00000603970 763 ntBASIC7.98□□□□□ -1.13
HMGB1P09429 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
HMGB1P09429 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
HMGB1P09429 AC023206.1-201ENST00000605824 298 ntBASIC7.98□□□□□ -1.13
HMGB1P09429 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC7.98□□□□□ -1.13
HMGB1P09429 AL354718.1-201ENST00000619764 589 ntBASIC7.98□□□□□ -1.13
HMGB1P09429 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC7.98□□□□□ -1.13
HMGB1P09429 RAD17P2-201ENST00000451754 1977 ntBASIC7.98□□□□□ -1.13
HMGB1P09429 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
HMGB1P09429 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
HMGB1P09429 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
HMGB1P09429 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
HMGB1P09429 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
HMGB1P09429 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
HMGB1P09429 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC7.98□□□□□ -1.13
HMGB1P09429 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
HMGB1P09429 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC7.98□□□□□ -1.13
HMGB1P09429 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC7.98□□□□□ -1.13
HMGB1P09429 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC7.97□□□□□ -1.13
HMGB1P09429 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
HMGB1P09429 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
HMGB1P09429 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
HMGB1P09429 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC7.97□□□□□ -1.13
HMGB1P09429 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
HMGB1P09429 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms