Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
APOEP02649 RNA5SP77-201ENST00000365394 120 ntBASIC6.66□□□□□ -1.34
APOEP02649 AP003170.5-201ENST00000397185 335 ntBASIC6.66□□□□□ -1.34
APOEP02649 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC6.66□□□□□ -1.34
APOEP02649 AL355355.1-201ENST00000442900 793 ntBASIC6.66□□□□□ -1.34
APOEP02649 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
APOEP02649 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC6.66□□□□□ -1.34
APOEP02649 AC005165.2-201ENST00000466070 380 ntBASIC6.66□□□□□ -1.34
APOEP02649 GM2AP2-201ENST00000491764 562 ntBASIC6.66□□□□□ -1.34
APOEP02649 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC6.66□□□□□ -1.34
APOEP02649 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC6.66□□□□□ -1.34
APOEP02649 GUSBP9-201ENST00000510138 584 ntBASIC6.66□□□□□ -1.34
APOEP02649 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC6.66□□□□□ -1.34
APOEP02649 SNORA74.1-201ENST00000516320 180 ntBASIC6.66□□□□□ -1.34
APOEP02649 COX6B1P4-201ENST00000519826 484 ntBASIC6.66□□□□□ -1.34
APOEP02649 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
APOEP02649 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC6.66□□□□□ -1.34
APOEP02649 DCN-209ENST00000546745 1026 ntTSL 3 BASIC6.66□□□□□ -1.34
APOEP02649 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC6.66□□□□□ -1.34
APOEP02649 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC6.66□□□□□ -1.34
APOEP02649 AC090616.1-201ENST00000583895 447 ntBASIC6.66□□□□□ -1.34
APOEP02649 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC6.66□□□□□ -1.34
APOEP02649 AC073046.2-201ENST00000604756 527 ntBASIC6.66□□□□□ -1.34
APOEP02649 SNORA74.4-201ENST00000607595 199 ntBASIC6.66□□□□□ -1.34
APOEP02649 OSTC-205ENST00000613215 876 ntTSL 2 BASIC6.66□□□□□ -1.34
APOEP02649 DRG1-207ENST00000629688 309 ntTSL 5 BASIC6.66□□□□□ -1.34
APOEP02649 AC010325.3-201ENST00000641084 394 ntBASIC6.66□□□□□ -1.34
APOEP02649 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
APOEP02649 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
APOEP02649 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.66□□□□□ -1.34
APOEP02649 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
APOEP02649 AC011504.1-201ENST00000623331 4103 ntBASIC6.66□□□□□ -1.34
APOEP02649 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC6.66□□□□□ -1.34
APOEP02649 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC6.66□□□□□ -1.34
APOEP02649 AL353743.3-201ENST00000442109 1468 ntBASIC6.66□□□□□ -1.34
APOEP02649 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
APOEP02649 FTO-215ENST00000636491 1676 ntTSL 5 BASIC6.65□□□□□ -1.34
APOEP02649 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.65□□□□□ -1.34
APOEP02649 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
APOEP02649 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
APOEP02649 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.34
APOEP02649 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
APOEP02649 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC6.65□□□□□ -1.34
APOEP02649 THEM7P-201ENST00000419556 672 ntBASIC6.65□□□□□ -1.34
APOEP02649 OSTCP4-201ENST00000424397 449 ntBASIC6.65□□□□□ -1.34
APOEP02649 ARMC4P1-201ENST00000438905 707 ntBASIC6.65□□□□□ -1.34
APOEP02649 OR2L9P-201ENST00000444456 913 ntBASIC6.65□□□□□ -1.34
APOEP02649 AC097359.1-201ENST00000447946 463 ntBASIC6.65□□□□□ -1.34
APOEP02649 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC6.65□□□□□ -1.34
APOEP02649 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC6.65□□□□□ -1.34
APOEP02649 CCNJP2-201ENST00000457810 1163 ntBASIC6.65□□□□□ -1.34
APOEP02649 H3F3AP5-201ENST00000475267 429 ntBASIC6.65□□□□□ -1.34
APOEP02649 AC005017.1-201ENST00000482002 490 ntBASIC6.65□□□□□ -1.34
APOEP02649 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
APOEP02649 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC6.65□□□□□ -1.34
APOEP02649 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
APOEP02649 AC093816.1-201ENST00000515076 913 ntBASIC6.65□□□□□ -1.34
APOEP02649 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC6.65□□□□□ -1.34
APOEP02649 AC121758.1-202ENST00000556917 658 ntBASIC6.65□□□□□ -1.34
APOEP02649 TPRX1P1-201ENST00000557620 319 ntBASIC6.65□□□□□ -1.34
APOEP02649 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC6.65□□□□□ -1.34
APOEP02649 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC6.65□□□□□ -1.34
APOEP02649 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC6.65□□□□□ -1.34
APOEP02649 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC6.65□□□□□ -1.34
APOEP02649 IGKV2OR2-1-201ENST00000605129 304 ntBASIC6.65□□□□□ -1.34
APOEP02649 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC6.65□□□□□ -1.34
APOEP02649 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC6.65□□□□□ -1.34
APOEP02649 AC004836.1-201ENST00000623032 634 ntBASIC6.65□□□□□ -1.34
APOEP02649 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
APOEP02649 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
APOEP02649 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
APOEP02649 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
APOEP02649 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
APOEP02649 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
APOEP02649 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
APOEP02649 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.64□□□□□ -1.35
APOEP02649 AC006511.3-201ENST00000624929 1783 ntBASIC6.64□□□□□ -1.35
APOEP02649 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
APOEP02649 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
APOEP02649 AP000432.2-201ENST00000624164 2048 ntBASIC6.64□□□□□ -1.35
APOEP02649 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC6.64□□□□□ -1.35
APOEP02649 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
APOEP02649 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
APOEP02649 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC6.64□□□□□ -1.35
APOEP02649 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
APOEP02649 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
APOEP02649 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
APOEP02649 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC6.64□□□□□ -1.35
APOEP02649 AL359885.1-201ENST00000415786 903 ntBASIC6.64□□□□□ -1.35
APOEP02649 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
APOEP02649 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC6.64□□□□□ -1.35
APOEP02649 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC6.64□□□□□ -1.35
APOEP02649 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC6.64□□□□□ -1.35
APOEP02649 RN7SL714P-201ENST00000487050 298 ntBASIC6.64□□□□□ -1.35
APOEP02649 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
APOEP02649 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC6.64□□□□□ -1.35
APOEP02649 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6.64□□□□□ -1.35
APOEP02649 OR4A41P-201ENST00000533053 928 ntBASIC6.64□□□□□ -1.35
APOEP02649 OLR1-209ENST00000543993 822 ntTSL 2 BASIC6.64□□□□□ -1.35
APOEP02649 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC6.64□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 12.3 ms